Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nakazawaea_20peltata_20[genbank_20GCA_5F001599355.1_202016-03-01] 11 sequences; 11,653,826 total letters Query= NC_029304.1 Length=111246 Score E Sequences producing significant alignments: (Bits) Value seq5 105 5e-18 >seq5 Length=1057341 Score = 105 bits (116), Expect = 5e-18 Identities = 166/236 (70%), Gaps = 4/236 (2%) Strand=Plus/Minus Query 27783 TAGTAAAATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGA 27842 || || ||||||||| || || || ||||||||||| || |||||| |||| || || Sbjct 899720 TAATACAATGCAAATCTTCGTTAAGACTCTTACTGGTAAGACTATTACCCTTGAGGTTGA 899661 Query 27843 AAGCACCGACG--ATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCG 27900 | | | ||| || |||| ||||| || || || || |||||| |||| Sbjct 899660 ATCCTCTGACACCATTGACAAC--GTCAAGTCCAAGATCCAAGATAAGGAAGGTATTCCA 899603 Query 27901 ATGGAGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCC 27960 || || ||| | ||||| ||||| || || |||||||| || | | | |||||| Sbjct 899602 CCTGACCAACAAAGATTAATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCC 899543 Query 27961 GATTACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016 || |||||||||||||| || ||| ||||| ||||||||| | ||| | || || Sbjct 899542 GACTACAACATCCAAAAGGAATCCACCTTGCACTTGGTTTTGAGATTGAGAGGTGG 899487 Score = 89.7 bits (98), Expect = 4e-13 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 27883 GACAAAGAAGGTGTTCCGATGGAGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGAC 27942 ||||| |||||| | || || || ||| | || || ||||| || || ||||| || Sbjct 274319 GACAAGGAAGGTATCCCACCTGACCAACAAAGATTGATCTTTGCTGGTAAGCAATTAGAG 274378 Query 27943 GACGAACGCAGCTTGTCCGATTACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTG 28002 |||| | | ||||||||| |||||||||||||| || ||||||||| ||||||||| Sbjct 274379 GACGGCAGAACCTTGTCCGACTACAACATCCAAAAGGAATCCACTTTGCACTTGGTTTTG 274438 Query 28003 CGTTTGCGTGGCGG 28016 | ||| | || || Sbjct 274439 AGATTGAGAGGTGG 274452 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355862352292197