Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nakazawaea_20peltata_20[genbank_20GCA_5F001599355.1_202016-03-01]
11 sequences; 11,653,826 total letters
Query= NC_029304.1
Length=111246
Score E
Sequences producing significant alignments: (Bits) Value
seq5 105 5e-18
>seq5
Length=1057341
Score = 105 bits (116), Expect = 5e-18
Identities = 166/236 (70%), Gaps = 4/236 (2%)
Strand=Plus/Minus
Query 27783 TAGTAAAATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGA 27842
|| || ||||||||| || || || ||||||||||| || |||||| |||| || ||
Sbjct 899720 TAATACAATGCAAATCTTCGTTAAGACTCTTACTGGTAAGACTATTACCCTTGAGGTTGA 899661
Query 27843 AAGCACCGACG--ATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCG 27900
| | | ||| || |||| ||||| || || || || |||||| ||||
Sbjct 899660 ATCCTCTGACACCATTGACAAC--GTCAAGTCCAAGATCCAAGATAAGGAAGGTATTCCA 899603
Query 27901 ATGGAGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCC 27960
|| || ||| | ||||| ||||| || || |||||||| || | | | ||||||
Sbjct 899602 CCTGACCAACAAAGATTAATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCC 899543
Query 27961 GATTACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016
|| |||||||||||||| || ||| ||||| ||||||||| | ||| | || ||
Sbjct 899542 GACTACAACATCCAAAAGGAATCCACCTTGCACTTGGTTTTGAGATTGAGAGGTGG 899487
Score = 89.7 bits (98), Expect = 4e-13
Identities = 100/134 (75%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 27883 GACAAAGAAGGTGTTCCGATGGAGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGAC 27942
||||| |||||| | || || || ||| | || || ||||| || || ||||| ||
Sbjct 274319 GACAAGGAAGGTATCCCACCTGACCAACAAAGATTGATCTTTGCTGGTAAGCAATTAGAG 274378
Query 27943 GACGAACGCAGCTTGTCCGATTACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTG 28002
|||| | | ||||||||| |||||||||||||| || ||||||||| |||||||||
Sbjct 274379 GACGGCAGAACCTTGTCCGACTACAACATCCAAAAGGAATCCACTTTGCACTTGGTTTTG 274438
Query 28003 CGTTTGCGTGGCGG 28016
| ||| | || ||
Sbjct 274439 AGATTGAGAGGTGG 274452
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 355862352292197
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |