Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nakazawaea_20peltata_20[genbank_20GCA_5F001599355.1_202016-03-01]
11 sequences; 11,653,826 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq5 152 1e-31
seq8 129 1e-24
seq3 102 2e-16
>seq5
Length=1057341
Score = 152 bits (168), Expect = 1e-31
Identities = 155/202 (77%), Gaps = 0/202 (0%)
Strand=Plus/Plus
Query 210918 GTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCT 210977
||||| || ||||||||||| || || | | || || |||||||||| ||||| ||
Sbjct 899517 GTGGATTCCTTTTGGATGTTGTAGTCGGACAAAGTTCTACCATCTTCCAATTGCTTACCA 899576
Query 210978 GCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTC 211037
|| ||||| | | |||||||||||| |||| |||||||| || |||||||| ||
Sbjct 899577 GCAAAGATTAATCTTTGTTGGTCAGGTGGAATACCTTCCTTATCTTGGATCTTGGACTTG 899636
Query 211038 ACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTC 211097
||||| || |||||||||||| ||||||||| || || || ||||| || || ||||||
Sbjct 899637 ACGTTGTCAATGGTGTCAGAGGATTCAACCTCAAGGGTAATAGTCTTACCAGTAAGAGTC 899696
Query 211098 TTTACAAACACCTGCATTTTAT 211119
|| || || | |||||| |||
Sbjct 899697 TTAACGAAGATTTGCATTGTAT 899718
Score = 125 bits (138), Expect = 2e-23
Identities = 150/204 (74%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 210911 GTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTG 210970
||| | |||||| || ||||||||||| || || | | || || |||||||||| ||
Sbjct 899054 GTGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGATAAAGTTCTACCATCTTCCAATTG 899113
Query 210971 CTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTT 211030
||| || || ||||| | | |||||||||||| |||| || || ||||| || || ||
Sbjct 899114 CTTACCAGCAAAGATTAATCTTTGTTGGTCAGGTGGAATACCCTCTTTGTCTTGAATTTT 899173
Query 211031 TTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGT 211090
|| || || || || |||||||| |||||| || | |||||| ||||| || ||
Sbjct 899174 GGACTTAACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGATAGTCTTACCAGT 899233
Query 211091 GAGAGTCTTTACAAACACCTGCAT 211114
| |||||| ||||| | |||||
Sbjct 899234 CAAAGTCTTAACAAAGATTTGCAT 899257
Score = 123 bits (136), Expect = 6e-23
Identities = 157/216 (73%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958
||| | ||| | ||||||||| || || ||||| ||||| ||||| | | || || ||
Sbjct 898814 TCTCAAGACTAAGTGAAGAGTAGATTCCTTTTGAATGTTGTAATCAGACAAAGTTCTACC 898873
Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018
|||||||| ||||| || ||||| || | | |||||||||||| |||| || || ||
Sbjct 898874 ATCTTCCAATTGCTTACCAGCGAAAATCAATCTTTGTTGGTCAGGTGGAATACCCTCTTT 898933
Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078
||| || || || || || || || |||||||| ||| |||||| || | ||||||
Sbjct 898934 GTCTTGAATTTTAGACTTGACATTGTCAATGGTGTCGGAGGATTCAACTTCCAAAGTGAT 898993
Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||||| || || | || || || || | |||||
Sbjct 898994 AGTCTTACCAGTTAAGGTTTTGACGAAGATTTGCAT 899029
Score = 122 bits (134), Expect = 2e-22
Identities = 151/207 (73%), Gaps = 0/207 (0%)
Strand=Plus/Minus
Query 210911 GTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTG 210970
||| | |||||| || ||||||||||| || || | | ||| || || || || | ||
Sbjct 274429 GTGCAAAGTGGATTCCTTTTGGATGTTGTAGTCGGACAAGGTTCTGCCGTCCTCTAATTG 274370
Query 210971 CTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTT 211030
||| || || ||||| | | |||||||||||| || | ||||||||||| ||||||||
Sbjct 274369 CTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTTGTCTTGGATCTT 274310
Query 211031 TTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGT 211090
|| ||||| || || |||||||| |||||| || | || || ||||| || ||
Sbjct 274309 GGACTTGACGTTGTCAATAGTGTCAGAAGATTCAACTTCCAAGGTAATGGTCTTACCTGT 274250
Query 211091 GAGAGTCTTTACAAACACCTGCATTTT 211117
|| ||||| || || | ||||| ||
Sbjct 274249 AAGGGTCTTAACGAAAATTTGCATCTT 274223
Score = 114 bits (126), Expect = 3e-20
Identities = 155/216 (72%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958
||||| ||| | |||||| || || || ||||| ||||| || || | | ||| || ||
Sbjct 899270 TCTTAAGACCAAGTGAAGGGTAGATTCCTTTTGAATGTTGTAGTCAGACAAGGTTCTGCC 899329
Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018
|| || | ||||| || || || || | | |||||| || ||||||| ||||||||
Sbjct 899330 GTCCTCTAATTGCTTACCAGCAAAAATCAATCTTTGTTGATCTGGAGGAATACCTTCCTT 899389
Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078
||| || ||||| || || || || |||||||| || |||||||| || || ||
Sbjct 899390 GTCTTGAATCTTAGACTTAACATTGTCAATGGTGTCGGAAGACTCAACCTCAAGGGTAAT 899449
Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||||| || || | |||||| || || | |||||
Sbjct 899450 GGTCTTACCGGTCAAAGTCTTGACGAAAATTTGCAT 899485
>seq8
Length=648860
Score = 129 bits (142), Expect = 1e-24
Identities = 160/219 (73%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958
||| | ||| | ||| | |||||||| ||||||||||| || || | | || || ||
Sbjct 616593 TCTCAAGACCAAGTGCAAGGTGGACTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTACC 616652
Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018
||| |||| ||||| || || ||||| | | |||||||||||| || | || |||||
Sbjct 616653 ATCCTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCCTCCTT 616712
Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078
||| |||||||| || ||||| || ||||||||||| |||||| || | || ||
Sbjct 616713 GTCTTGGATCTTGGACTTGACGTTGTCAATGGTGTCAGAAGATTCAACTTCCAAGGTAAT 616772
Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117
||||| || || | |||||| || || | ||||| ||
Sbjct 616773 GGTCTTACCTGTCAAAGTCTTAACGAAAATTTGCATCTT 616811
>seq3
Length=1357868
Score = 102 bits (112), Expect = 2e-16
Identities = 132/181 (73%), Gaps = 1/181 (1%)
Strand=Plus/Minus
Query 139803 TTGCCTT-CCAAAGAAGCACGGAAGAGGAGGACAATCTGCTCTGCGTTTTGAAAGACTTC 139861
||| ||| |||||||||||||| ||||| || |||||||| | ||||| ||| |
Sbjct 471422 TTGACTTACCAAAGAAGCACGGTAGAGGTGGTCAATCTGCCTTACGTTTCTCTAGATTGA 471363
Query 139862 GAAAGGAAAAGAGGCACAACTACTTGAGAAAAGTTGCAGAGAACGCAATACAGTGTTTTA 139921
|| | || ||||| || ||||| | ||||| || ||||||| || | || |||||||
Sbjct 471362 GAGACGAGAAGAGACATAACTATGTCAGAAAGGTAGCAGAGACTGCTGTGCAATGTTTTA 471303
Query 139922 TCAAAGACAACAAGTGTTTTGTTTCTGGTATTGTTTTGGCAGGTTCCGCAGAGTTCAAGA 139981
||| || ||||| ||| ||||| | ||||||| ||||| || || |||||||
Sbjct 471302 TCACTAACGACAAGATCAATGTCACTGGTTTGATTTTGGCTGGTTCTGCCGATTTCAAGA 471243
Query 139982 C 139982
|
Sbjct 471242 C 471242
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1159151836632015
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |