Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nakazawaea_20peltata_20[genbank_20GCA_5F001599355.1_202016-03-01]
11 sequences; 11,653,826 total letters
Query= NC_030656.1
Length=133492
Score E
Sequences producing significant alignments: (Bits) Value
seq4 201 1e-46
>seq4
Length=1221263
Score = 201 bits (222), Expect = 1e-46
Identities = 596/908 (66%), Gaps = 21/908 (2%)
Strand=Plus/Plus
Query 4248 ACACCAAATTTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAAC 4307
|||||| |||||||| ||||| |||| ||| |||||||| || || || || | ||
Sbjct 1136894 ACACCAGCCTTTTGGTAATCGGAGACTCTCTTCTCGAAGAAGTTGGTCTTACCAGCCAAG 1136953
Query 4308 GAAATATTTTCCATAAAATCAAACGGATTAGTTGCGTTGTAA-TGTTTTTCACACTTTAG 4366
||||| |||||||| ||||| || || || | |||||||| | || || || |
Sbjct 1136954 GAAATGTTTTCCATGAAATCGAATGGGTTGTTAACGTTGTAAATCTTCTTGTTACCCAA- 1137012
Query 4367 AGCTACAAGCAATCGGTCAGCTACA-AATTCTATATACTGGCTCATGAGTTCGCAGTTAA 4425
|| |||| |||| ||| || ||| || || | || ||| ||| | | ||||| |
Sbjct 1137013 AGAAGCAAGTAATCTGTCTGC-ACAGAACTCGACGTATTGGACCATCAACTTACAGTTCA 1137071
Query 4426 TTCCAATTAATCTCACAGGTAGCGCGTATGTCAAAAACTCTTGT-TCTATAGTTACGGCT 4484
| || | || || || | || | | || | ||| | || || | || ||
Sbjct 1137072 TACCCAACAAGGAGACTGGCAAGGCATCGATGAAGTA-TCTAGACTCGATGGAGACAGCC 1137130
Query 4485 TCTGTGATTATATCTTTTATTTTATCTTTAGATGGTTTATTTACTAAGTATCCAAACAAT 4544
|| || || || | | | | ||| |||||| || || |||| | |||||
Sbjct 1137131 TCGGTAATGATCTTCTCGACAATCTCTGGAGATGGCTTGTTGTTCAAGTGAGCGAACAAC 1137190
Query 4545 AAACACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTT 4604
||||| ||||| || |||| |||||| ||||| || |||| |||||||| || ||
Sbjct 1137191 AAACAGGCAAAGTCGGTGTGCATACCTTCATCTCTACTGATCAACTCGTTAGAGAAGGTC 1137250
Query 4605 AATCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAG 4664
|| || ||||||||||||||||| || | ||| || |||| ||||| || ||| |||
Sbjct 1137251 AAACCTGGCATTAAACCTCTCTTCTTCAACCAGAAGATAGAAGCAAAGGAACCACTGAAG 1137310
Query 4665 AATATGCCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGCTTTGTCT 4724
|| || ||||| ||||| ||||| || || |||| |||||| | | | |||||
Sbjct 1137311 AAGATACCTTCAACGGCAGCAAAGGCAACCAATCTCTCACCGAACAAAGCGTCCTTGTCA 1137370
Query 4725 TTAATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCG 4784
|| |||||| | || ||||||| || || | ||| | || ||||| || | || ||
Sbjct 1137371 TTGATCCATCTCAAAGCCCAGTCGGCCTTCTCCTTGATACATGGAATAGTCTCGATGGCA 1137430
Query 4785 TTAAATAA----TTTACTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCT 4840
|| || || | ||| || ||| || | || || ||||| || | |
Sbjct 1137431 TTGAACAAGAAGTCAGCTTCCTT----TGGATCCTTGATGTAGGTGTCAATCAACAAAGA 1137486
Query 4841 ATACATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTC 4900
|| | ||||| || || || || || ||| || || ||||| || || | |||
Sbjct 1137487 GTAAGTCTCAGAGTGGATGTTCTCCATCATAATTTGGAAACCGTAGAAACACTTCAGTTC 1137546
Query 4901 TGTTACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACT 4960
| | |||||| ||| | | || | || || ||||| ||||| || |||||||||
Sbjct 1137547 AGGAAGTTGAACCTCGGCAGAGAAGTTCTCAACCAAGTTCTCGTTGACAATACCGTCAGA 1137606
Query 4961 GGCTGCAAAAAACGCCAAAACATGAGATATAAAGTA---CTGTTCGTCAGGCTTAAGTT- 5016
||| || || || |||||||| || || || || || | ||| | | || ||
Sbjct 1137607 GGCGGCGAAGAAGGCCAAAACTCTGGAGATGAAATATCTCTCGTTGTC--GTTCAACTTG 1137664
Query 5017 -TTTTCCAGTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCT 5075
| ||||||| | ||| ||| |||| |||| || || | ||||| || || ||
Sbjct 1137665 GTCTTCCAGTCAATGATATCCTTACTTAAGTCAATCTCCTCGGCGGTCCAGAAAGAAGCC 1137724
Query 5076 TCCGCTTTTTTGTACATAGACCAAATATCAGGATACTGAATCGGAAGTATGACAAATCTG 5135
|| || || |||||||| ||| || || | |||| || || | | ||| |||||
Sbjct 1137725 TCGGCCTTCTTGTACATTTGCCAGATTTCGTGGTACTTGATTGGGAACAAGACGAATCTC 1137784
Query 5136 TTGTCGTT 5143
|| | |||
Sbjct 1137785 TTCTTGTT 1137792
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 427049542748663
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |