Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nakazawaea_20peltata_20[genbank_20GCA_5F001599355.1_202016-03-01] 11 sequences; 11,653,826 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq4 201 1e-46 >seq4 Length=1221263 Score = 201 bits (222), Expect = 1e-46 Identities = 596/908 (66%), Gaps = 21/908 (2%) Strand=Plus/Plus Query 4248 ACACCAAATTTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAAC 4307 |||||| |||||||| ||||| |||| ||| |||||||| || || || || | || Sbjct 1136894 ACACCAGCCTTTTGGTAATCGGAGACTCTCTTCTCGAAGAAGTTGGTCTTACCAGCCAAG 1136953 Query 4308 GAAATATTTTCCATAAAATCAAACGGATTAGTTGCGTTGTAA-TGTTTTTCACACTTTAG 4366 ||||| |||||||| ||||| || || || | |||||||| | || || || | Sbjct 1136954 GAAATGTTTTCCATGAAATCGAATGGGTTGTTAACGTTGTAAATCTTCTTGTTACCCAA- 1137012 Query 4367 AGCTACAAGCAATCGGTCAGCTACA-AATTCTATATACTGGCTCATGAGTTCGCAGTTAA 4425 || |||| |||| ||| || ||| || || | || ||| ||| | | ||||| | Sbjct 1137013 AGAAGCAAGTAATCTGTCTGC-ACAGAACTCGACGTATTGGACCATCAACTTACAGTTCA 1137071 Query 4426 TTCCAATTAATCTCACAGGTAGCGCGTATGTCAAAAACTCTTGT-TCTATAGTTACGGCT 4484 | || | || || || | || | | || | ||| | || || | || || Sbjct 1137072 TACCCAACAAGGAGACTGGCAAGGCATCGATGAAGTA-TCTAGACTCGATGGAGACAGCC 1137130 Query 4485 TCTGTGATTATATCTTTTATTTTATCTTTAGATGGTTTATTTACTAAGTATCCAAACAAT 4544 || || || || | | | | ||| |||||| || || |||| | ||||| Sbjct 1137131 TCGGTAATGATCTTCTCGACAATCTCTGGAGATGGCTTGTTGTTCAAGTGAGCGAACAAC 1137190 Query 4545 AAACACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTT 4604 ||||| ||||| || |||| |||||| ||||| || |||| |||||||| || || Sbjct 1137191 AAACAGGCAAAGTCGGTGTGCATACCTTCATCTCTACTGATCAACTCGTTAGAGAAGGTC 1137250 Query 4605 AATCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAG 4664 || || ||||||||||||||||| || | ||| || |||| ||||| || ||| ||| Sbjct 1137251 AAACCTGGCATTAAACCTCTCTTCTTCAACCAGAAGATAGAAGCAAAGGAACCACTGAAG 1137310 Query 4665 AATATGCCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGCTTTGTCT 4724 || || ||||| ||||| ||||| || || |||| |||||| | | | ||||| Sbjct 1137311 AAGATACCTTCAACGGCAGCAAAGGCAACCAATCTCTCACCGAACAAAGCGTCCTTGTCA 1137370 Query 4725 TTAATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCG 4784 || |||||| | || ||||||| || || | ||| | || ||||| || | || || Sbjct 1137371 TTGATCCATCTCAAAGCCCAGTCGGCCTTCTCCTTGATACATGGAATAGTCTCGATGGCA 1137430 Query 4785 TTAAATAA----TTTACTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCT 4840 || || || | ||| || ||| || | || || ||||| || | | Sbjct 1137431 TTGAACAAGAAGTCAGCTTCCTT----TGGATCCTTGATGTAGGTGTCAATCAACAAAGA 1137486 Query 4841 ATACATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTC 4900 || | ||||| || || || || || ||| || || ||||| || || | ||| Sbjct 1137487 GTAAGTCTCAGAGTGGATGTTCTCCATCATAATTTGGAAACCGTAGAAACACTTCAGTTC 1137546 Query 4901 TGTTACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACT 4960 | | |||||| ||| | | || | || || ||||| ||||| || ||||||||| Sbjct 1137547 AGGAAGTTGAACCTCGGCAGAGAAGTTCTCAACCAAGTTCTCGTTGACAATACCGTCAGA 1137606 Query 4961 GGCTGCAAAAAACGCCAAAACATGAGATATAAAGTA---CTGTTCGTCAGGCTTAAGTT- 5016 ||| || || || |||||||| || || || || || | ||| | | || || Sbjct 1137607 GGCGGCGAAGAAGGCCAAAACTCTGGAGATGAAATATCTCTCGTTGTC--GTTCAACTTG 1137664 Query 5017 -TTTTCCAGTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCT 5075 | ||||||| | ||| ||| |||| |||| || || | ||||| || || || Sbjct 1137665 GTCTTCCAGTCAATGATATCCTTACTTAAGTCAATCTCCTCGGCGGTCCAGAAAGAAGCC 1137724 Query 5076 TCCGCTTTTTTGTACATAGACCAAATATCAGGATACTGAATCGGAAGTATGACAAATCTG 5135 || || || |||||||| ||| || || | |||| || || | | ||| ||||| Sbjct 1137725 TCGGCCTTCTTGTACATTTGCCAGATTTCGTGGTACTTGATTGGGAACAAGACGAATCTC 1137784 Query 5136 TTGTCGTT 5143 || | ||| Sbjct 1137785 TTCTTGTT 1137792 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427049542748663