Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nakazawaea_20peltata_20[genbank_20GCA_5F001599355.1_202016-03-01]
11 sequences; 11,653,826 total letters
Query= NC_031033.1
Length=217124
Score E
Sequences producing significant alignments: (Bits) Value
seq1 185 1e-41
seq4 161 1e-34
seq8 140 5e-28
>seq1
Length=2934271
Score = 185 bits (204), Expect = 1e-41
Identities = 334/485 (69%), Gaps = 9/485 (2%)
Strand=Plus/Minus
Query 76782 GTAAACTGAATTGGAGAAGATGCGGGTTTTGTACGTAGATAGTACATACCAGTTTTTAGA 76841
|| || ||||| | || ||| |||| || || | | ||||||||||| || || | |
Sbjct 86997 GTGAATTGAATGGCAGCAGAGGCGGCTTGAGTTCTCAAGTAGTACATACCGGTCTTCAAA 86938
Query 76842 CCCAGACTCCATCCGTAGAAATGCATGCTTGTCAGTTTGGA-ATAACTAGGATCGGCT-- 76898
||| |||| |||||||| ||||| || |||| || ||| | || | ||
Sbjct 86937 CCCTTCTTCCAACCGTAGAAGTGCATACTGGTCAACTTACCCATAGTTGGG---GCCTTG 86881
Query 76899 ATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTT 76958
||||||||||||| || ||| |||||| ||| | || || | || || ||||| |
Sbjct 86880 ATATGAATATTCAAAGATTGAGATTGATCAATGTAGGCACCACGGTCGGCAGCCATGTCA 86821
Query 76959 ATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTGGA 77018
|| ||||||||||||| | |||||||| || ||| | | || || | ||||||||
Sbjct 86820 ATGATGGTCTTTTGAGACAATTCCCAAACGGTCTTGTAGATTTTCTTCAATTCATCTGGG 86761
Query 77019 AGGTTTGTA---TTTTGAATGGAACCACCATCTGATATAATTGTATTCTTTATATCATCA 77075
| ||||| |||||||| || || ||| || || || ||||| || ||
Sbjct 86760 ATGTTTGGCAAGTTTTGAATAGATCCGTTATCGGAAATGATATGGTTCTTCATGGAGTCG 86701
Query 77076 TTCCACAATTTCCTCTCTGTTAAAACTCTAAGGAGATGAGGATTAACTATTTGAAATTCT 77135
||||||||| | || ||| |||| | | | || || || ||||| |||||
Sbjct 86700 TTCCACAATCCCAAATCAACCAAATCTCTTAACAAGTATGGGTTGACAATTTGGAATTCA 86641
Query 77136 CCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTGTTT 77195
|| | ||| ||||| | || |||||| ||| || || || || | | |||| ||||
Sbjct 86640 CCGGCCAACACTCTTCTAGAGTAAATGTTAGAAGTGTACGGCTCGAAACATTCGTTGTAA 86581
Query 77196 CCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACTATTTCTGAGA 77255
||||| ||||||| |||||||||||||||||| || || ||||| ||| ||||| | |
Sbjct 86580 CCCAAGATTTGAGAAGTAGAAGCAGTTGGCATTGGAGCAACCAACAAAGAGTTTCTCATA 86521
Query 77256 CCATG 77260
|| ||
Sbjct 86520 CCGTG 86516
Score = 170 bits (188), Expect = 3e-37
Identities = 786/1230 (64%), Gaps = 38/1230 (3%)
Strand=Plus/Minus
Query 77676 AAAGCTATAGATGCTAGATTACAAACTGCTACCTCATTAGCGTTGGCATATTGTATTATC 77735
|| || ||||| || | |||||||| ||| || | || || | ||||| | |||
Sbjct 86088 AAGGCAATAGAGGCCAAGTTACAAACGGCTGTTTCTTCAGGGTCAGAATATTCGACAATC 86029
Query 77736 TCGGTACATAGATTACTACATTTGATAGTGCCCAGATTTTGTTGGTTGCTCTTTTTATTG 77795
|| ||| | ||| | | |||||| | |||| || | ||||||| |||| || ||
Sbjct 86028 TCACAACACAAGTTAGAAGACTTGATAATACCCAAGTTCTTTTGGTTGGTCTTCTTGTTA 85969
Query 77796 CATGAGTCCTTATAAAGAATAAACGGAGTCCCGGTTTCAATCTGTGATTCGATAATAGAT 77855
|| | || || || | || || ||||| ||||| ||| | || | || | ||| ||
Sbjct 85968 CAAGCATCTTTGTACAACATGAATGGAGTACCGGTCTCAGTTTGAGCCTCCAAAATGGAG 85909
Query 77856 TTCCAGACGACTCTAGCTTTTATCATAGATTTGTAT----CGCCTCTCTCTTTCATATTG 77911
| ||| | ||| | || || ||||| | || | ||| | || ||||
Sbjct 85908 TACCACAATT-TCTGGGCCTTGACAG---TTTGTCTACCACGGCCTTCTTTCTCGTATTT 85853
Query 77912 A--GTATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCAATCCAGGGCATTCATTT 77969
||| | ||| | || ||||| || |||| || | || || || |||||||
Sbjct 85852 CTCGTACAAAGCAATG--AACTCATCACCGTAAACCTCGGCTAAACCTGGAGCTTCATTT 85795
Query 77970 GGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATC 78029
|| | | ||| | ||| || | | | |||| || ||| || | ||| || |||
Sbjct 85794 GGAGAGAACAAGGTCCAATCTTGGTTCTTTTCGACTCTTTGCATGAACAAATCTGGGATC 85735
Query 78030 CATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCTTTTTAAGA 78089
|||| ||| || | ||||| || |||| |||||| || || ||||||| | |
Sbjct 85734 CATAAAGCTGGGAACAAATCTCTGGCTCTAATTTCTTCCTTACCGTGATTCTTTCTGATG 85675
Query 78090 TCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATTGCCATAACTCCAGGT 78149
|| | || || | || || | ||||||||| || | || | || | | || |||
Sbjct 85674 TCAATGAAGTCGAAGATGTCGGCATGCCATGGCTCAATGTACAAGGCAAAGGCACCTGGT 85615
Query 78150 CGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGA 78209
| || ||||| || || || | || | || ||||| || | ||||| | |||||||
Sbjct 85614 CTCTTGTTACCACCTTGGTCGACGTAACGAGCAGTGTTGTTGAAGACTCTAACCATTGGA 85555
Query 78210 ATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAATATTA 78269
||||||||||| || || || || || || | ||| ||| ||| | || | ||| ||
Sbjct 85554 ATAATACCGTTGGAAGTACCGTTAGTACCGGCAATGTAAGAACCAGTGGCTCTAATGTT- 85496
Query 78270 CTAATGGATAT----CCCTATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAA 78325
||||||| || || || || || |||| || || | || || ||||||
Sbjct 85495 ---GTGGATATGCAAACCAATACCACCGGCAGTCTTGGAAATCAAGGCACACTCTTTCAA 85439
Query 78326 TGTATCGTAGATACCCTCTATACTGTCATCCATCATGTTAAGAAGAAAACAGCTAGACAT 78385
|| || || ||||| || ||| || ||| ||||| || ||| ||||| ||||||
Sbjct 85438 AGTGTCATAAATACCTTCGATAGAATCCTCCTTCATGGCAACAAGGAAACAAGAAGACAT 85379
Query 78386 TTGATGATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTC 78445
||| | || ||| || || || || || || ||||| ||||| || || | ||
Sbjct 85378 TTGTGGGTGTGGAGTACCAGCGTTGAACAAAGTTGGAGAAGCATGGGTGAAATACTTCAA 85319
Query 78446 AGAAAGTAGATTGTATGTTTCAATAGCTGATTCTATG-TCCCATTGATGAATTCCTACCG 78504
||| | | || || || || || | || ||| | || | || | || | |
Sbjct 85318 AGACAACATGTTATAAGTCTCGATGACCTTCTCGATGTTATCACCG-TGGACACCAATGG 85260
Query 78505 CTACACGCATCAACATATGCTGAGGTCTTTCAACCGTCTTATTATTTATTTTCAACAAGT 78564
| || | ||| || ||| || |||||||| | ||| | || ||||||| |
Sbjct 85259 CGACTCTCATATTCAAATGTTGTGGTCTTTCGGCAACTTTACCGTCGATCCTCAACAAAT 85200
Query 78565 ATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCTCTCGTAAAT 78622
| ||| | |||| || || |||||||| ||||| || ||||| || | || ||||
Sbjct 85199 AAGATCTCTCCATGGTCTTGAAACCAAAGTAGTTATAGTTGAAA--TCACGGTCATAAAC 85142
Query 78623 AATAACAGAATTTAGTTTATCTTTGTATTTG--GTAACAATATCCATGACAGTAGTT-GA 78679
|| |||| |||| | ||| | || | | ||||||| ||| | || ||
Sbjct 85141 GATGGCAGAGTTTAACTCATC--GGCATGAGCCATGACAATAT-CATAGGTTTCCTTGGA 85085
Query 78680 AATAATAGGAGATCGTACACCATTTTTAGGATTAACATAGTTAAATAAATCTTCCATTAC 78739
| |||||||| ||| |||||| || || || |||||||| ||||| | | ||
Sbjct 85084 GACCATAGGAGAATGTAAACCATTCTTTGGGTTGACATAGTTGTATAAAGAGGCAACGAC 85025
Query 78740 ATCACTAAATAGtttttttGTTTCCTTGTGTAGATTAGATACAGCTATTCTTGCAGCTAG 78799
|||||| || ||| | |||| || || | ||||| | || ||||| || ||||
Sbjct 85024 ATCACTGAAACATTTGGTGGTTTGTTTATGCAAGTTAGAGATGGCGATTCTGGCGGCTAA 84965
Query 78800 AATAGCATAATCAGGATG--TTGT-GTAGTACAAGTGGCTGCTATTTCTGCCGCTAAAAT 78856
|| || || || || || ||| || || ||| ||| | | || || || || |
Sbjct 84964 GATGGCGTAGTCTGGGTGGACTGTGGTCATATAAGCGGCGG---TCTCGGCGGCCAAGTT 84908
Query 78857 ATCTAACTCTATAGTTGTGACCCCATTATA 78886
||||||||| || || ||||| || | |||
Sbjct 84907 ATCTAACTCGATGGTGGTGACACCTTCATA 84878
>seq4
Length=1221263
Score = 161 bits (178), Expect = 1e-34
Identities = 400/603 (66%), Gaps = 8/603 (1%)
Strand=Plus/Plus
Query 48132 AACATTAAACATGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAA 48191
|||| ||||| ||||| || || | ||||||||||||||| || || ||||||||
Sbjct 1137185 AACAACAAACAGGCAAAGTCGGTGTGCATACCTTCATCTCTACTGATCAACTCGTTAGAG 1137244
Query 48192 AATGTGAGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCA 48251
|| || | ||| ||||||| || | || || | ||| || || | || || || |||
Sbjct 1137245 AAGGTCAAACCTGGCATTAAACCTCTCTTCTTCAACCAGAAGATAGAAGCAAAGGAACCA 1137304
Query 48252 GAAAAGAATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGGCTTCG 48311
||||| || ||||| ||||| ||||| || | |||||| ||| | || ||
Sbjct 1137305 CTGAAGAAGATACCTTCAACGGCAGCAAAGGCAACCAATCTCTCACCGAACAAAGCGTCC 1137364
Query 48312 TTG---TGTATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGCATTGTTTCT 48368
||| | ||||| | ||||| || ||||||| ||| | ||| || || || ||
Sbjct 1137365 TTGTCATTGATCCATCTCAAAGCCCAGTCGGCCTTCTCCTTGATACATGGAATAGTCTCG 1137424
Query 48369 ATAGCATTAAAGAGAAAGtttttttCATTGCTATCTTTAACGTAAGTATCTATTAAAAGA 48428
|| ||||| || | |||| ||| || ||| || | ||| || || || || | |
Sbjct 1137425 ATGGCATTGAACAAGAAGTCAGCTTCCTTTGGATCCTTGATGTAGGTGTCAATCAACAAA 1137484
Query 48429 CTATACATTTCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCT 48488
|| | || ||||| || || || || || || || ||||| ||||| || |
Sbjct 1137485 GAGTAAGTCTCAGAGTGGATGTTCTCCATCATAATTTGGAAACCGTAGAAACACTTCAGT 1137544
Query 48489 TCTGTGATCTGTACCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCA 48548
|| | | || ||||| | | | || ||| |||| ||||| || || || || |||
Sbjct 1137545 TCAGGAAGTTGAACCTCGGCAGAGAAGTTCTCAACCAAGTTCTCGTTGACAATACCGTCA 1137604
Query 48549 CTAGCAGCAAAAAATGCTAATACATGTTTA-ATAAAATATTTTTCGTTGGAAGTCAGTT- 48606
|| || || || || || || | | | || |||||| | |||||| ||| |
Sbjct 1137605 GAGGCGGCGAAGAAGGCCAAAAC-TCTGGAGATGAAATATCTCTCGTTGTCGTTCAACTT 1137663
Query 48607 --TATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGC 48664
| ||||||||| ||||||| || || || | || || || ||||| || || ||
Sbjct 1137664 GGTCTTCCAGTCAATGATATCCTTACTTAAGTCAATCTCCTCGGCGGTCCAGAAAGAAGC 1137723
Query 48665 CTCTGCTTTTTTATACATATTCCATATATCACTGTATTGGATTGGGAAAATAACAAATCT 48724
||| || || || ||||| | ||| || || ||| | ||||||||| | || |||||
Sbjct 1137724 CTCGGCCTTCTTGTACATTTGCCAGATTTCGTGGTACTTGATTGGGAACAAGACGAATCT 1137783
Query 48725 ATT 48727
||
Sbjct 1137784 CTT 1137786
>seq8
Length=648860
Score = 140 bits (154), Expect = 5e-28
Identities = 250/362 (69%), Gaps = 6/362 (2%)
Strand=Plus/Plus
Query 78003 ACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGT 78062
|||| ||||||||| | |||||| | ||| | | || | ||| | | |||| |
Sbjct 32387 ACTCTTTTCATAAATAAATCAGGCACCCACAACAGAGGGAACAAATCCCTAGCTCTAATT 32446
Query 78063 TCTTCATTTCCTGTATTCTTTTTAAG-ATCGAGA--AACTCCATAATATCAGAATGCCAT 78119
|| || || || || |||||| | ||| | || || | ||||||| |||||||
Sbjct 32447 TCCTCTTTCCC---ATGATTTTTACGGATCCCAATGAAATCAAAAATATCATTATGCCAT 32503
Query 78120 GGTTCTAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTG 78179
||||| | ||| | || ||| | ||||||| ||||||||||| ||||||| |||||||
Sbjct 32504 GGTTCCAAATACACGGCGATAGCACCAGGTCTCTTATTACCTCCTTGATCTACATATCTG 32563
Query 78180 GCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCA 78239
|| | || || | ||||||||||| || ||||| || ||||| || ||||| || |||
Sbjct 32564 GCAGCATTGTTGAACACTCTCAACATCGGGATAATCCCATTAGAGGTCCCATTAGTACCA 32623
Query 78240 GAAATATAACTTCCACTTGCGCGAATATTACTAATGGATATCCCTATTCCTCCTGCCATC 78299
|| || |||| ||| | | | ||||| ||| || || || |||||||| |
Sbjct 32624 GAGATGAAACTCCCAGTCGATCTGATATTGTGAATATGCATTCCAATACCTCCTGCATTT 32683
Query 78300 TTAGATATTAGAGCGCAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCCATC 78359
||||| || | ||||| || | ||||| | || ||||| || |||||| ||
Sbjct 32684 TTAGAGATCATCGCGCACTCCTTGAGCGTATCAAAAATCCCCTCGATGGAATCATCCTTC 32743
Query 78360 AT 78361
||
Sbjct 32744 AT 32745
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694668704483040
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