Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nakazawaea_20peltata_20[genbank_20GCA_5F001599355.1_202016-03-01]
11 sequences; 11,653,826 total letters
Query= NC_031038.1
Length=222832
Score E
Sequences producing significant alignments: (Bits) Value
seq1 179 5e-40
seq8 154 2e-32
seq4 149 9e-31
>seq1
Length=2934271
Score = 179 bits (198), Expect = 5e-40
Identities = 333/485 (69%), Gaps = 9/485 (2%)
Strand=Plus/Minus
Query 75377 GTGAACTGAATGGGAGAGGATGCTGGTTTTGTACGTAGATAGTACATACCAGTTTTTAGA 75436
||||| ||||||| || || || | || || | | ||||||||||| || || | |
Sbjct 86997 GTGAATTGAATGGCAGCAGAGGCGGCTTGAGTTCTCAAGTAGTACATACCGGTCTTCAAA 86938
Query 75437 CCCAGACTCCATCCGTAGAAATGCATGCTTGTTAGTTTGGA-ATAACTCGGATCGGCT-- 75493
||| |||| |||||||| ||||| || || | || ||| | || | ||
Sbjct 86937 CCCTTCTTCCAACCGTAGAAGTGCATACTGGTCAACTTACCCATAGTTGGG---GCCTTG 86881
Query 75494 ATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTT 75553
||||||||||||| || ||| |||||| ||| | || || | || || ||||| |
Sbjct 86880 ATATGAATATTCAAAGATTGAGATTGATCAATGTAGGCACCACGGTCGGCAGCCATGTCA 86821
Query 75554 ATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTGGA 75613
|| ||||||||||||| | |||||||| || ||| | | || || | ||||||||
Sbjct 86820 ATGATGGTCTTTTGAGACAATTCCCAAACGGTCTTGTAGATTTTCTTCAATTCATCTGGG 86761
Query 75614 AGATTTG---TATTTTGAATGGATCCGCCATCAGATATAATTGTATTCTTGATCTCATCA 75670
| |||| |||||||| |||||| ||| || || || ||||| || ||
Sbjct 86760 ATGTTTGGCAAGTTTTGAATAGATCCGTTATCGGAAATGATATGGTTCTTCATGGAGTCG 86701
Query 75671 TTCCACAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACAATTTGAAATTCT 75730
||||||||| || ||| |||| | | | || || |||||||| |||||
Sbjct 86700 TTCCACAATCCCAAATCAACCAAATCTCTTAACAAGTATGGGTTGACAATTTGGAATTCA 86641
Query 75731 CCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTGTTT 75790
|| | ||| ||||||| || |||||| ||| || || || || | | |||| ||||
Sbjct 86640 CCGGCCAACACTCTTCTAGAGTAAATGTTAGAAGTGTACGGCTCGAAACATTCGTTGTAA 86581
Query 75791 CCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTGAGA 75850
||||| ||||||| ||| |||||||| ||||| || || ||||| ||| ||||| | |
Sbjct 86580 CCCAAGATTTGAGAAGTAGAAGCAGTTGGCATTGGAGCAACCAACAAAGAGTTTCTCATA 86521
Query 75851 CCATG 75855
|| ||
Sbjct 86520 CCGTG 86516
Score = 168 bits (186), Expect = 1e-36
Identities = 449/683 (66%), Gaps = 6/683 (1%)
Strand=Plus/Minus
Query 76523 AATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACATCAATGACCAC 76582
|| ||||| || |||| || | ||||| ||| |||||| ||| | | ||| | |||
Sbjct 85836 AACTCATCACCGTAAACCTCGGCTAAACCTGGAGCTTCATTTGGAGAGAACAAGGTCCAA 85777
Query 76583 TCACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGA 76642
|| | | | || | || ||| || | ||| || ||||||| ||| || | |
Sbjct 85776 TCTTGGTTCTTTTCGACTCTTTGCATGAACAAATCTGGGATCCATAAAGCTGGGAACAAA 85717
Query 76643 TCTCGGGTTCTACGTTCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATAATA 76702
|||| || |||| |||||| || || ||||||| | | || | ||| || | ||
Sbjct 85716 TCTCTGGCTCTAATTTCTTCCTTACCGTGATTCTTTCTGATGTCAATGAAGTCGAAGATG 85657
Query 76703 TCAGAATGCCATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTATTACCTCCCTGA 76762
|| | ||||||||| || | || | || | |||| |||| || ||||| || ||
Sbjct 85656 TCGGCATGCCATGGCTCAATGTACAAGGCAAAGGCACCTGGTCTCTTGTTACCACCTTGG 85597
Query 76763 TCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCGTTAGATGTA 76822
|| | || | |||||||| || | ||||| | |||||||||||| ||||| || |||
Sbjct 85596 TCGACGTAACGAGCAGTGTTGTTGAAGACTCTAACCATTGGAATAATACCGTTGGAAGTA 85537
Query 76823 CCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAATAGATAGGCCTATT 76882
|| || || || | ||| ||| ||| || | ||| || ||| | || ||
Sbjct 85536 CCGTTAGTACCGGCAATGTAAGAACCAGTGGCTCTAATGTTGTGGATATGCAAACCAATA 85477
Query 76883 CCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATGCCCTCTATA 76942
|| || || | || || || | ||||| |||||| |||||||| || || || |||
Sbjct 85476 CCACCGGCAGTCTTGGAAATCAAGGCACACTCTTTCAAAGTGTCATAAATACCTTCGATA 85417
Query 76943 CTATCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCA 77002
||| ||| ||||| || ||| ||||| ||||||||| | || ||| || ||
Sbjct 85416 GAATCCTCCTTCATGGCAACAAGGAAACAAGAAGACATTTGTGGGTGTGGAGTACCAGCG 85357
Query 77003 TTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTGTATGTTTCA 77062
|| ||||| || ||||| ||||| ||||| | || ||| | | || || || ||
Sbjct 85356 TTGAACAAAGTTGGAGAAGCATGGGTGAAATACTTCAAAGACAACATGTTATAAGTCTCG 85297
Query 77063 ATAACTGCTTCTATATCCCAT--TGATGAATTCCTACAGCGACACGCATCAACATATGCT 77120
|| || ||||| || || || | || | ||||| | ||| || ||| |
Sbjct 85296 ATGAC--CTTCTCGATGTTATCACCGTGGACACCAATGGCGACTCTCATATTCAAATGTT 85239
Query 77121 GAGGTCGTTCTACAGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAA 77180
| |||| ||| || ||| | || ||||||| || ||| | |||| || || |
Sbjct 85238 GTGGTCTTTCGGCAACTTTACCGTCGATCCTCAACAAATAAGATCTCTCCATGGTCTTGA 85179
Query 77181 AACCAAAATAGTTGTA--TGAAA 77201
||||||| ||||| || |||||
Sbjct 85178 AACCAAAGTAGTTATAGTTGAAA 85156
>seq8
Length=648860
Score = 154 bits (170), Expect = 2e-32
Identities = 400/601 (67%), Gaps = 23/601 (4%)
Strand=Plus/Plus
Query 76603 TTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTC 76662
||||||||| | |||||| | ||| | | || | ||| | | |||| ||| ||
Sbjct 32392 TTTCATAAATAAATCAGGCACCCACAACAGAGGGAACAAATCCCTAGCTCTAATTTCCTC 32451
Query 76663 ATTTCCTGTATTCTTTTTAAG-ATCT--AGGAACTCCATAATATCAGAATGCCATGGTTC 76719
|| || || |||||| | ||| | ||| || | ||||||| ||||||||||||
Sbjct 32452 TTTCCC---ATGATTTTTACGGATCCCAATGAAATCAAAAATATCATTATGCCATGGTTC 32508
Query 76720 TAGATATATCGCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGT 76779
| ||| | || ||| |||| |||| ||||||||||| ||||||| |||||||||||
Sbjct 32509 CAAATACACGGCGATAGCACCAGGTCTCTTATTACCTCCTTGATCTACATATCTGGCAGC 32568
Query 76780 GTTATTATAAACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAAT 76839
|| || | ||||||||||| || ||||| || ||||| || ||||| || ||||| ||
Sbjct 32569 ATTGTTGAACACTCTCAACATCGGGATAATCCCATTAGAGGTCCCATTAGTACCAGAGAT 32628
Query 76840 ATAACTTCCACATGCACGAATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGA 76899
|||| ||| | | ||||| |||| | || || |||||||| |||||||
Sbjct 32629 GAAACTCCCAGTCGATCTGATATTGTGAATATGCATTCCAATACCTCCTGCATTTTTAGA 32688
Query 76900 GATTAGAGCACAGCGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCATGTT 76959
||| | || || || | || ||| | || ||||| || ||||||| ||||
Sbjct 32689 GATCATCGCGCACTCCTTGAGCGTATCAAAAATCCCCTCGATGGAATCATCCTTCATTGC 32748
Query 76960 AAGAAGAAAACAGCTAGACATT---TGATGATGAACAGTTCCTGCATTAAACAATGTAGG 77016
| ||| | ||| |||| | || | | ||| || | ||| || | ||||||
Sbjct 32749 CACAAGGA---AGCATGACAGTAACTGGGGTCTCAGAGTACCAGAATTGAAAAGTGTAGG 32805
Query 77017 AGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTGTATGTTTC-AATAACTGCTTCTA 77075
| | |||| ||| | || || | | | ||| ||||| |||| | | || |
Sbjct 32806 ACTTCCATGTACGAAGAAACGTTTGGACATCAATTCGTAAGTTTCTAATATCAG-GTCAA 32864
Query 77076 TATCCCATTG---ATGAATTCCTACAGCGACACGCATCAACATATGCTGAGGTCGTTCT- 77131
| || | | ||| ||||||||| || | ||| | | ||||||||||| |||
Sbjct 32865 TGTCTTCTGGGCCATGGATTCCTACACTAACTCTCATTAGTAAATGCTGAGGTCTCTCTG 32924
Query 77132 --ACAGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAAT 77189
|| | | || ||| | ||||| || || |||||||||||||| ||||| ||||
Sbjct 32925 CGACGGCC---CCATCTATCCTTAACAAATACGACTTTTCCAAAGTTTTGAAACCGAAAT 32981
Query 77190 A 77190
|
Sbjct 32982 A 32982
>seq4
Length=1221263
Score = 149 bits (164), Expect = 9e-31
Identities = 397/603 (66%), Gaps = 8/603 (1%)
Strand=Plus/Plus
Query 46621 AACATTAAACATGCAAAATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAA 46680
|||| ||||| ||||| || || | |||||||||||||| || || ||||||||
Sbjct 1137185 AACAACAAACAGGCAAAGTCGGTGTGCATACCTTCATCTCTACTGATCAACTCGTTAGAG 1137244
Query 46681 AATGTGAGCCCAGGCATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCA 46740
|| || | || ||||||| || | ||| || | ||| || |||| || || || |||
Sbjct 1137245 AAGGTCAAACCTGGCATTAAACCTCTCTTCTTCAACCAGAAGATAGAAGCAAAGGAACCA 1137304
Query 46741 GAAAAGAATATGCCTTCTACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCATCA 46800
||||| || ||||| || || || || || || | |||||| ||| | || ||
Sbjct 1137305 CTGAAGAAGATACCTTCAACGGCAGCAAAGGCAACCAATCTCTCACCGAACAAAGCGTCC 1137364
Query 46801 TT---ATGAATCCACCTTTGAGCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCT 46857
|| || ||||| || |||||| || ||||| | ||| | ||| || || || ||
Sbjct 1137365 TTGTCATTGATCCATCTCAAAGCCCAGTCGGCCTTCTCCTTGATACATGGAATAGTCTCG 1137424
Query 46858 ATAGCATTAAAGAGAAAGtttttttCATCACTATCTTTAACATATGTATCTATTAAAAGA 46917
|| ||||| || | |||| ||| | ||| || | || || || || || | |
Sbjct 1137425 ATGGCATTGAACAAGAAGTCAGCTTCCTTTGGATCCTTGATGTAGGTGTCAATCAACAAA 1137484
Query 46918 CTATACATTTCTGAATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCT 46977
|| | || || || ||||| || || || || || ||||| ||||| | |
Sbjct 1137485 GAGTAAGTCTCAGAGTGGATGTTCTCCATCATAATTTGGAAACCGTAGAAACACTTCAGT 1137544
Query 46978 TCAGTAATCTGTACCTCTGTACAAAATCGTTCAGACAAATTCTCATTCACTATTCCATCA 47037
|||| || || ||||| | | | || ||| ||| ||||| || || || || |||
Sbjct 1137545 TCAGGAAGTTGAACCTCGGCAGAGAAGTTCTCAACCAAGTTCTCGTTGACAATACCGTCA 1137604
Query 47038 CTAGCAGCAAAAAATGCCAATACATGTTTA-ATAAAATATTTTTCATCGGTAGTCAGTT- 47095
|| || || || ||||| || | | | || |||||| | || | | ||| |
Sbjct 1137605 GAGGCGGCGAAGAAGGCCAAAAC-TCTGGAGATGAAATATCTCTCGTTGTCGTTCAACTT 1137663
Query 47096 --TATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGC 47153
| ||||||||| ||||||| || || || | || || || |||||||| || ||
Sbjct 1137664 GGTCTTCCAGTCAATGATATCCTTACTTAAGTCAATCTCCTCGGCGGTCCAGAAAGAAGC 1137723
Query 47154 CTCTGCTTTTTTATACATATTCCATATATCACGATATTGGATCGGAAAAATAACAAATCT 47213
||| || || || ||||| | ||| || || | || | ||| || || | || |||||
Sbjct 1137724 CTCGGCCTTCTTGTACATTTGCCAGATTTCGTGGTACTTGATTGGGAACAAGACGAATCT 1137783
Query 47214 ATT 47216
||
Sbjct 1137784 CTT 1137786
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 712934301971520
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