Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nakazawaea_20peltata_20[genbank_20GCA_5F001599355.1_202016-03-01]
11 sequences; 11,653,826 total letters
Query= NC_032111.1
Length=163005
Score E
Sequences producing significant alignments: (Bits) Value
seq4 111 2e-19
>seq4
Length=1221263
Score = 111 bits (122), Expect = 2e-19
Identities = 390/603 (65%), Gaps = 11/603 (2%)
Strand=Plus/Plus
Query 23500 AACAATAAACATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAA 23559
||||| ||||| ||||| || || | |||||||| ||||| ||||| || |||||
Sbjct 1137185 AACAACAAACAGGCAAAGTCGGTGTGCATACCTTCATCTCTACTGATCAACTCGTTAGAG 1137244
Query 23560 AATGTTAATCCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCG 23619
|| || || ||||||||||| |||| || || | ||| || || | |||||| || ||
Sbjct 1137245 AAGGTCAAACCTGGCATTAAACCTCTCTTCTTCAACCAGAAGATAGAAGCAAAGGAACCA 1137304
Query 23620 GAAAAGAAAATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTA 23679
||||| ||||| ||||| || |||||||| || | | ||| || || |
Sbjct 1137305 CTGAAGAAGATACCTTCAACGGCAGCAAAGGCAACCAATCTCTCACCGAACAAAGCGTCC 1137364
Query 23680 TAATCAGAAATCCAtttttttGTCCAATTAGCCTTCAATTTTACACACTCAATTGTTTCA 23739
| ||| |||||| | | ||| | |||||| || | ||| ||| || ||
Sbjct 1137365 TTGTCATTGATCCATCTCAAAGCCCAGTCGGCCTTCTCCTTGATACATGGAATAGTCTCG 1137424
Query 23740 ATTGCTTTTAAGAGAAAAGTTTTTTCTTCATT---ATCTGTTATATATGTATCAATTAGT 23796
|| || || || | | ||| | |||| || ||| | || || || ||||| |
Sbjct 1137425 ATGGCATTGAACA-AGAAG--TCAGCTTCCTTTGGATCCTTGATGTAGGTGTCAATCAAC 1137481
Query 23797 AAACTATACATTTCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACATCTA 23856
||| || | ||||| || || || || || ||| || || || || ||||| |
Sbjct 1137482 AAAGAGTAAGTCTCAGAGTGGATGTTCTCCATCATAATTTGGAAACCGTAGAAACACTTC 1137541
Query 23857 GCTTCAGACAATTGAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAATACCA 23916
||||| | |||||| || | | || | | | | || || ||||| ||||||||
Sbjct 1137542 AGTTCAGGAAGTTGAACCTCGGCAGAGAAGTTCTCAACCAAGTTCTCGTTGACAATACCG 1137601
Query 23917 TCACTAGCAGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCAGTTGAT-AA 23975
||| || || ||||| || | ||| || |||| ||| || | || | | ||
Sbjct 1137602 TCAGAGGCGGCGAAGAAGGCCAAAACTCTGGAGATGAAATATCTCTCGT-TGTCGTTCAA 1137660
Query 23976 TT---TTTTCCAATCATTAATATCTTTTGATAAATCAACTTCATCAACTGTCCAAAAACT 24032
| | ||||| ||| | ||||| || ||| |||| || || | ||||| |||
Sbjct 1137661 CTTGGTCTTCCAGTCAATGATATCCTTACTTAAGTCAATCTCCTCGGCGGTCCAGAAAGA 1137720
Query 24033 TGCCAAGGCACGCTTATACATTAGCCAAATATCATTATGTTGTATTGGAAATATTACGAA 24092
||| ||| ||| |||||| |||| || || | | | ||||| || | |||||
Sbjct 1137721 AGCCTCGGCCTTCTTGTACATTTGCCAGATTTCGTGGTACTTGATTGGGAACAAGACGAA 1137780
Query 24093 TCT 24095
|||
Sbjct 1137781 TCT 1137783
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 521487928295400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |