Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nakazawaea_20peltata_20[genbank_20GCA_5F001599355.1_202016-03-01] 11 sequences; 11,653,826 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq4 111 2e-19 >seq4 Length=1221263 Score = 111 bits (122), Expect = 2e-19 Identities = 390/603 (65%), Gaps = 11/603 (2%) Strand=Plus/Plus Query 23500 AACAATAAACATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAA 23559 ||||| ||||| ||||| || || | |||||||| ||||| ||||| || ||||| Sbjct 1137185 AACAACAAACAGGCAAAGTCGGTGTGCATACCTTCATCTCTACTGATCAACTCGTTAGAG 1137244 Query 23560 AATGTTAATCCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCG 23619 || || || ||||||||||| |||| || || | ||| || || | |||||| || || Sbjct 1137245 AAGGTCAAACCTGGCATTAAACCTCTCTTCTTCAACCAGAAGATAGAAGCAAAGGAACCA 1137304 Query 23620 GAAAAGAAAATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTA 23679 ||||| ||||| ||||| || |||||||| || | | ||| || || | Sbjct 1137305 CTGAAGAAGATACCTTCAACGGCAGCAAAGGCAACCAATCTCTCACCGAACAAAGCGTCC 1137364 Query 23680 TAATCAGAAATCCAtttttttGTCCAATTAGCCTTCAATTTTACACACTCAATTGTTTCA 23739 | ||| |||||| | | ||| | |||||| || | ||| ||| || || Sbjct 1137365 TTGTCATTGATCCATCTCAAAGCCCAGTCGGCCTTCTCCTTGATACATGGAATAGTCTCG 1137424 Query 23740 ATTGCTTTTAAGAGAAAAGTTTTTTCTTCATT---ATCTGTTATATATGTATCAATTAGT 23796 || || || || | | ||| | |||| || ||| | || || || ||||| | Sbjct 1137425 ATGGCATTGAACA-AGAAG--TCAGCTTCCTTTGGATCCTTGATGTAGGTGTCAATCAAC 1137481 Query 23797 AAACTATACATTTCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACATCTA 23856 ||| || | ||||| || || || || || ||| || || || || ||||| | Sbjct 1137482 AAAGAGTAAGTCTCAGAGTGGATGTTCTCCATCATAATTTGGAAACCGTAGAAACACTTC 1137541 Query 23857 GCTTCAGACAATTGAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAATACCA 23916 ||||| | |||||| || | | || | | | | || || ||||| |||||||| Sbjct 1137542 AGTTCAGGAAGTTGAACCTCGGCAGAGAAGTTCTCAACCAAGTTCTCGTTGACAATACCG 1137601 Query 23917 TCACTAGCAGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCAGTTGAT-AA 23975 ||| || || ||||| || | ||| || |||| ||| || | || | | || Sbjct 1137602 TCAGAGGCGGCGAAGAAGGCCAAAACTCTGGAGATGAAATATCTCTCGT-TGTCGTTCAA 1137660 Query 23976 TT---TTTTCCAATCATTAATATCTTTTGATAAATCAACTTCATCAACTGTCCAAAAACT 24032 | | ||||| ||| | ||||| || ||| |||| || || | ||||| ||| Sbjct 1137661 CTTGGTCTTCCAGTCAATGATATCCTTACTTAAGTCAATCTCCTCGGCGGTCCAGAAAGA 1137720 Query 24033 TGCCAAGGCACGCTTATACATTAGCCAAATATCATTATGTTGTATTGGAAATATTACGAA 24092 ||| ||| ||| |||||| |||| || || | | | ||||| || | ||||| Sbjct 1137721 AGCCTCGGCCTTCTTGTACATTTGCCAGATTTCGTGGTACTTGATTGGGAACAAGACGAA 1137780 Query 24093 TCT 24095 ||| Sbjct 1137781 TCT 1137783 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521487928295400