Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nakazawaea_20peltata_20[genbank_20GCA_5F001599355.1_202016-03-01]
11 sequences; 11,653,826 total letters
Query= NC_033423.1
Length=208501
Score E
Sequences producing significant alignments: (Bits) Value
seq1 156 6e-33
seq7 98.7 1e-15
>seq1
Length=2934271
Score = 156 bits (172), Expect = 6e-33
Identities = 284/415 (68%), Gaps = 17/415 (4%)
Strand=Plus/Minus
Query 50475 GGAGATTTAGGACCTGTTTACGGTTTTCAATGGAGACATTTTGGAGCGCGTTACATAAAT 50534
|| ||||| ||||| ||||| || || |||||||||||||| || || |||| | ||
Sbjct 113187 GGTGATTTGGGACCGGTTTATGGGTTCCAATGGAGACATTTCGGTGCCGAATACAAAGAT 113128
Query 50535 TGCGACGTAAATTACGAAGGTCAAGGCGTGGATCAACTGCAAAAAATTATAACGACGTTG 50594
|| || | |||| ||||||||| || ||||| | | || || | |||
Sbjct 113127 TGTGATCTGGATTATTCAGGTCAAGGATATGACCAACTTGCAGAGATCATTCACAAGTTA 113068
Query 50595 AAAACAAACCCCGACGATCGGCGTATTTTAATGACCGCCTGGAATCCAACCGATATAGAT 50654
|| || || || | || || | || | |||| || ||||||||| | ||| | |
Sbjct 113067 AAGACTAATCCTTATGACCGTAGAATCATTATGAGTGCTTGGAATCCACCAGATTTCGCC 113008
Query 50655 CAAACCGTTTTACCTCCGTGTCATGTTTTATGTCAATTTTATG--------CCACAGACA 50706
|| | | |||||| || |||||||| || |||||||| |||| ||| || |
Sbjct 113007 CAGATGGCTTTACCACCATGTCATGTATTCTGTCAATTCTATGTGAATTTCCCAGAGGGA 112948
Query 50707 ATGTT-------TTATCCTGTCAATGTTATCAAAGATCAGCTGATATGGGTTTAGGCGTT 50759
| | || || ||| || |||||||||||| ||||||||| || || |||
Sbjct 112947 AAGAAACCGGAATTGTCATGTTTATTATATCAAAGATCATGTGATATGGGATTGGGTGTT 112888
Query 50760 CCTTTCAACGTAGCTTCTTACGCTTTATTAACGTATTTGATCGCTCAA-GCCGTCGATAT 50818
||||||||| | ||| ||||||||||| || | ||||||||||| | || |||||
Sbjct 112887 CCTTTCAACATTGCTAGCTACGCTTTATTGACCAAGATGATCGCTCAATGTTGT-GATAT 112829
Query 50819 GAAACCGGGAGAATTTATTCATACGTTAGGAGACGCTCATATTTACCTCGATCAC 50873
||| ||||| || |||||||| | ||||| |||||| | || | ||||||
Sbjct 112828 GAACTGTGGAGATTTCATTCATACCATGGGAGATGCTCATGTGTATTTGGATCAC 112774
>seq7
Length=809317
Score = 98.7 bits (108), Expect = 1e-15
Identities = 120/164 (73%), Gaps = 0/164 (0%)
Strand=Plus/Plus
Query 63733 AGATCTTCTAAAATACCAGAAATAGGTGATAAATTTGCTTCTTTTACAGCTCAAAAAGGT 63792
||| || |||| | || |||| |||||||| ||||||||| | | ||||||||||
Sbjct 676196 AGAACTACTAAGGTTCCTCAAATTGGTGATAAGTTTGCTTCTCGTCACGGTCAAAAAGGT 676255
Query 63793 ACGTGTGGTATGATTTATCGACAAGAAGATATGCCTTTTACCAAAGACGGTATCGTACCC 63852
|| |||||| | ||| || | |||||||||| ||| ||| || ||||| || ||
Sbjct 676256 ACTATTGGTATTACTTACAGAAATGAAGATATGCTTTTCACCGCCGAAGGTATGGTTCCA 676315
Query 63853 GATCTCGTCATCAATCCACACGCTTTTCCCAGTCGTATGACCGT 63896
||| | | ||||| || |||||| |||| ||||||||| ||
Sbjct 676316 GATTTGATTATCAACCCGCACGCTATTCCATCTCGTATGACTGT 676359
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 667075108277160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |