Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nakazawaea_20peltata_20[genbank_20GCA_5F001599355.1_202016-03-01] 11 sequences; 11,653,826 total letters Query= NC_033423.1 Length=208501 Score E Sequences producing significant alignments: (Bits) Value seq1 156 6e-33 seq7 98.7 1e-15 >seq1 Length=2934271 Score = 156 bits (172), Expect = 6e-33 Identities = 284/415 (68%), Gaps = 17/415 (4%) Strand=Plus/Minus Query 50475 GGAGATTTAGGACCTGTTTACGGTTTTCAATGGAGACATTTTGGAGCGCGTTACATAAAT 50534 || ||||| ||||| ||||| || || |||||||||||||| || || |||| | || Sbjct 113187 GGTGATTTGGGACCGGTTTATGGGTTCCAATGGAGACATTTCGGTGCCGAATACAAAGAT 113128 Query 50535 TGCGACGTAAATTACGAAGGTCAAGGCGTGGATCAACTGCAAAAAATTATAACGACGTTG 50594 || || | |||| ||||||||| || ||||| | | || || | ||| Sbjct 113127 TGTGATCTGGATTATTCAGGTCAAGGATATGACCAACTTGCAGAGATCATTCACAAGTTA 113068 Query 50595 AAAACAAACCCCGACGATCGGCGTATTTTAATGACCGCCTGGAATCCAACCGATATAGAT 50654 || || || || | || || | || | |||| || ||||||||| | ||| | | Sbjct 113067 AAGACTAATCCTTATGACCGTAGAATCATTATGAGTGCTTGGAATCCACCAGATTTCGCC 113008 Query 50655 CAAACCGTTTTACCTCCGTGTCATGTTTTATGTCAATTTTATG--------CCACAGACA 50706 || | | |||||| || |||||||| || |||||||| |||| ||| || | Sbjct 113007 CAGATGGCTTTACCACCATGTCATGTATTCTGTCAATTCTATGTGAATTTCCCAGAGGGA 112948 Query 50707 ATGTT-------TTATCCTGTCAATGTTATCAAAGATCAGCTGATATGGGTTTAGGCGTT 50759 | | || || ||| || |||||||||||| ||||||||| || || ||| Sbjct 112947 AAGAAACCGGAATTGTCATGTTTATTATATCAAAGATCATGTGATATGGGATTGGGTGTT 112888 Query 50760 CCTTTCAACGTAGCTTCTTACGCTTTATTAACGTATTTGATCGCTCAA-GCCGTCGATAT 50818 ||||||||| | ||| ||||||||||| || | ||||||||||| | || ||||| Sbjct 112887 CCTTTCAACATTGCTAGCTACGCTTTATTGACCAAGATGATCGCTCAATGTTGT-GATAT 112829 Query 50819 GAAACCGGGAGAATTTATTCATACGTTAGGAGACGCTCATATTTACCTCGATCAC 50873 ||| ||||| || |||||||| | ||||| |||||| | || | |||||| Sbjct 112828 GAACTGTGGAGATTTCATTCATACCATGGGAGATGCTCATGTGTATTTGGATCAC 112774 >seq7 Length=809317 Score = 98.7 bits (108), Expect = 1e-15 Identities = 120/164 (73%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 63733 AGATCTTCTAAAATACCAGAAATAGGTGATAAATTTGCTTCTTTTACAGCTCAAAAAGGT 63792 ||| || |||| | || |||| |||||||| ||||||||| | | |||||||||| Sbjct 676196 AGAACTACTAAGGTTCCTCAAATTGGTGATAAGTTTGCTTCTCGTCACGGTCAAAAAGGT 676255 Query 63793 ACGTGTGGTATGATTTATCGACAAGAAGATATGCCTTTTACCAAAGACGGTATCGTACCC 63852 || |||||| | ||| || | |||||||||| ||| ||| || ||||| || || Sbjct 676256 ACTATTGGTATTACTTACAGAAATGAAGATATGCTTTTCACCGCCGAAGGTATGGTTCCA 676315 Query 63853 GATCTCGTCATCAATCCACACGCTTTTCCCAGTCGTATGACCGT 63896 ||| | | ||||| || |||||| |||| ||||||||| || Sbjct 676316 GATTTGATTATCAACCCGCACGCTATTCCATCTCGTATGACTGT 676359 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 667075108277160