Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Naumovozyma_20dairenensis_20[genbank_20GCA_5F001074275.1_202015-07- 10] 4,670 sequences; 13,985,759 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq3520 161 1e-34 seq3454 105 1e-17 seq3068 100 4e-16 >seq3520 Length=28158 Score = 161 bits (178), Expect = 1e-34 Identities = 444/687 (65%), Gaps = 50/687 (7%) Strand=Plus/Minus Query 205329 TAATTTTGGAAATGGGTTTGGTGTACGTTCTAATTGtttttttAATCCATTAATATGATT 205388 |||||| |||||| | || || | | ||| ||||||| |||||| ||| ||||| | Sbjct 21107 TAATTTGGGAAATTGTTTAGGGATTCTTTCAAATTGTTCTTTTAAGGCATCTATATGGTC 21048 Query 205389 AACATATATATGTGCATTACCAATATTATGAATAAATTCATATGGTTTTAAATTAGTTAA 205448 | ||| | |||||||| ||| | | |||||||||||||| | | || | Sbjct 21047 CAAATAGACATGTGCATCACCTAAAGTATGAATAAATTCACCACAGTCCATATCCACCAC 20988 Query 205449 ATGTGCAATCATATAAGTCAATAAACTATAACTAGCAACATTAAATGGTACACCTAAACC 205508 |||||||||||| | || |||||| || |||| |||||||||||||||||| || Sbjct 20987 ATGTGCAATCATCTTGGTTAATAAAGCGTAGGATGCAATATTAAATGGTACACCTAACCC 20928 Query 205509 CATATCAGCTGATCTTTGATACATTTGACATG---------------------TAAGATA 205547 ||||||| || |||||||||| | ||| | || | Sbjct 20927 CATATCACAAGACCTTTGATACAATAAACAAGATAATTTTGGTTTGGCCGTTTTAGCTTG 20868 Query 205548 TTTA---TTATT-----------------------AATT-ACATGAAATTGT-ACAAAAC 205579 |||| ||||| |||| |||| |||||| | ||||| Sbjct 20867 TTTAGGATTATTTGGGTCCGGCAGAGATGTAGGGAAATTCACATAAAATTGACAGAAAAC 20808 Query 205580 AATGACAAGGTGGTATAACCATATTTTCAACATCTATAGGATTCCAGGCTGTTAATATTA 205639 ||||| || || | |||| || ||| |||| |||||||| || | | || | Sbjct 20807 G-TGACATGGAGGCAAGGCCATTTTAGCAAAATCTGGCGGATTCCAAGCAGACATGATAA 20749 Query 205640 TATTTCTAGATTCAGGtttattttttattttatttatAATATGTGTTAATTGATCAAATC 205699 | ||||| | || || |||| | ||| || |||| | | |||||||||||||| Sbjct 20748 TTCTTCTATCATATGGATTTGTTTTCAATTTTTTAATAACGTCTTGTAATTGATCAAATC 20689 Query 205700 CTTGATTTGTATAATTTGTATCCATATCAATATATTTAGCACCAAAATGACGCCATTGAA 205759 ||||| ||||||| | ||| ||| |||||| || |||||||| | |||||| | Sbjct 20688 CTTGACCGGTATAATCGGAATCACAATCTTTATATTCTGCTCCAAAATGTCTCCATTGGA 20629 Query 205760 AACCATAAACTGGACCTAAATCACCTTCTTTTCTATCATTAAAACCACGtttttttatat 205819 | || |||||||| || ||||| ||||| | || | | || || ||| | | | Sbjct 20628 ACCCGTAAACTGGTCCCAAATCTCCTTCACGACGATGAGTCAACCCTAATTTGTCCAAAA 20569 Query 205820 attttaatgatccattttcatcccaaatatggattcctttattttttaGAATATTTGTAT 205879 ||| |||||||| | |||||||| | | ||| || | ||| || || | || Sbjct 20568 ATTCACGAGATCCATTGCCTTCCCAAATCTTCACTCCCTTTTCACTTAATATTTTAGCAT 20509 Query 205880 TAGTTGATCCAGATATAAACCATAATAATTCTTCAACAATTCCTCTCCAAAACATTGATT 205939 ||| || |||| | ||||||||||||||| | | || ||| | |||| | | || Sbjct 20508 CAGTAGAGCCAGCAACAAACCATAATAATTCATGTATGATCCCTTTTGAAAATACTTTTT 20449 Query 205940 TTGTTGTAAATAATGGAAATGAATCAT 205966 | || || ||||| ||||| | ||||| Sbjct 20448 TAGTGGTTAATAAAGGAAAAGTATCAT 20422 >seq3454 Length=12387 Score = 105 bits (116), Expect = 1e-17 Identities = 122/163 (75%), Gaps = 1/163 (1%) Strand=Plus/Minus Query 124636 AAGAAGGTATACCACCTGATCAACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATA 124695 |||||||||| ||||| || |||||||| | ||||| || || ||||||||||| ||| Sbjct 12387 AAGAAGGTATTCCACCAGACCAACAAAGATTGATTTTCGCTGGTAAACAATTAGAAGATG 12328 Query 124696 GTCGAACATTAGAAGATTATAATATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTT 124755 || |||| || || || || || ||||||||||| || ||||| ||||| || | | Sbjct 12327 GTAGAACCTTGTCTGACTACAACATCCAAAAAGAATCTACCTTGCACTTGGTCTTGAGAT 12268 Query 124756 TACGAGGTGGTAT-TAAAAATTCATAAAAATTGATTGTAAATA 124797 | |||||||| | ||| || |||| |||| | |||||| Sbjct 12267 TGAGAGGTGGTTTCTAATTTTTTATAATCATTGCTGCTAAATA 12225 >seq3068 Length=8349 Score = 100 bits (110), Expect = 4e-16 Identities = 106/140 (76%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 124635 AAAGAAGGTATACCACCTGATCAACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGAT 124694 ||||||||||| ||||| || |||||||| | |||||||| || |||||||| || || Sbjct 3 AAAGAAGGTATTCCACCAGACCAACAAAGATTGATTTTTGCTGGTAAACAATTGGAAGAC 62 Query 124695 AGTCGAACATTAGAAGATTATAATATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGT 124754 || |||| || || || || || ||||| ||||| || ||||| ||||| || | Sbjct 63 GGTAGAACTTTGTCTGACTACAACATCCAAAAGGAATCCACCTTGCACTTGGTCTTGAGA 122 Query 124755 TTACGAGGTGGTATTAAAAA 124774 || |||||||| |||||| Sbjct 123 TTGAGAGGTGGTGGTAAAAA 142 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 755411900256000