Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Naumovozyma_20dairenensis_20[genbank_20GCA_5F001074275.1_202015-07- 10] 4,670 sequences; 13,985,759 total letters Query= NC_002642.1 Length=144575 Score E Sequences producing significant alignments: (Bits) Value seq3714 291 8e-74 seq3673 275 6e-69 >seq3714 Length=15575 Score = 291 bits (322), Expect = 8e-74 Identities = 602/888 (68%), Gaps = 21/888 (2%) Strand=Plus/Minus Query 15943 TTTTTGATATTCACTAACTCTCTTTTCAAAGAAATTTGTTTTTCCTTCTAATGAAATATT 16002 ||||||||| || |||||| |||||||||||||| || || || | || ||||| || Sbjct 4748 TTTTTGATAGTCTGAAACTCTTTTTTCAAAGAAATTGGTCTTACCGGCCAAGGAAATGTT 4689 Query 16003 TTCCATAAAATCAAAAGGATTTTTTGAACAATAGTAT---TTATCGCATCCCAATTCCAA 16059 |||||| ||||| || ||||| | |||| | |||| || | | || || |||| Sbjct 4688 TTCCATGAAATCGAATGGATTAGT--AACATT-GTATACTTTCTTGTTACCTAAAGCCAA 4632 Query 16060 CAATAATCTATCCGCCACAAATTCTATATACTGTTTCATTAAATCACAGTTCATTCCTAT 16119 ||| |||||||| || || ||||| || || || ||| || | ||||||||| || | Sbjct 4631 CAACAATCTATCAGCGACGAATTCAATGTATTGACACATCAAGTTACAGTTCATACCCAA 4572 Query 16120 TAATTTAACAGGGATTGCTTCTGTTAAAAAAtttttttCTATATTAACCGCTTCAATGAT 16179 ||| || || | || || || || | | |||||| | || ||| |||||| | || Sbjct 4571 CAATGACACTGGAAGAGCATCAGTAAAGTATTCTTTTTCAACATCAACAGCTTCAGTAAT 4512 Query 16180 TATATCTCTTACTACACTATTTAACGGAG--GGTTTAAT----AAGTGTTTAAACATTAT 16233 || |||| | ||| | | | |||| ||| || | || || ||| | | Sbjct 4511 AAT---TCTTTCAACAATCTCT---GGAGATGGTCTATTCTGCAAATGAGCAAATAACAA 4458 Query 16234 ACAAGCAAAATCACAATGCAATCCTTCGTCCCTACTTATTAACTCGTTTGAAAATGTAAG 16293 ||| ||||| || || || ||||| || |||| || || || ||||| || || | Sbjct 4457 ACAGGCAAAGTCGGTGTGTAAACCTTCATCTCTACAAATCAATTCATTTGAGAAAGTCAA 4398 Query 16294 ACCTGGCATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGCAAATGAACCAGAAAAGAA 16353 ||||||||| | |||| ||||| | ||| || |||| |||||||||||| ||||| Sbjct 4397 ACCTGGCATCAAACCTCTCTTTTTCAACCAGAAAATAGAAGCAAATGAACCACTGAAGAA 4338 Query 16354 TATACCTTCAACTGCGGCAAATGCAACCAATCGCTCACCGTACGTTCTAtttttactttc 16413 ||||||||||| || ||||| || || |||| ||||| || | | | || Sbjct 4337 GATACCTTCAACAGCAGCAAAAGCTACTAATCTTTCACCATATAAGGCTTCATCATCTTG 4278 Query 16414 tatccattttttagcccaatttgctttttgtttAACACAGTTCATGTTCTCTATTGCATT 16473 |||||||| ||||||||| ||||| | || || ||| || || | || ||||| Sbjct 4277 AATCCATTTGATAGCCCAATCAGCTTTCTTTTGAATACATGGAATATTAGCAATGGCATT 4218 Query 16474 AAATAAATAAtttttttCTTTGCTATCTAAAATATAAGTATCTATTAGTAAACTATACAT 16533 || || |||| |||| | |||| ||||| || || || | |||| ||| | Sbjct 4217 GAACAAGTAATCAGCCTCTTGGGGATCTTTGATATATGTTTCAATCAATAAAGAATAGGT 4158 Query 16534 TTCTGAATGAATATTCTCCATTGCTATCTGAAAACCATAAAAGCATCTAGCTTCGGATAT 16593 |||||||||||| || ||||| || || |||||||| || || | ||||| | | Sbjct 4157 TTCTGAATGAATGTTTTCCATCATGATTTGGAAACCATAGAATGATTTGGCTTCAGGAAG 4098 Query 16594 TTGTACTTCAGAGTAAAACCTTTCTGCTAAGTTTTCGTTAACTATTCCATCGCTAGCTGC 16653 ||| ||||||| | || |||| ||| ||||| ||| || |||||| ||| || Sbjct 4097 TTGAACTTCAGTTGAGAAATTTTCAATTAAATTTTCACCAACAATACCATCGGAAGCGGC 4038 Query 16654 AAAAAACGCAAGTATGTGTTTAATAAAAtttttttCGTTATC-TGAAAGT--TTTAACCA 16710 |||||| || | || |||||||| | |||| || || | || | || ||| Sbjct 4037 AAAAAATGCCAATACTCTAGAAATAAAATATCTTTCATTTTCATTTAATTTGTTGTTCCA 3978 Query 16711 GTCAGAAAAATCTTTTGATAAATCGACCTCTTCTACAGTCCAAAAAGAAGCAACAGCCTT 16770 |||| |||||||| ||||| | ||||| ||||||| || ||||| ||||||| Sbjct 3977 GTCATCCAAATCTTTACTCAAATCAATTTCTTCAGCAGTCCAGAAGGAAGCTTCAGCCTT 3918 Query 16771 TTTATACATTTTCCATATGTCTTCGTAAACAATAGGAAACACAACATA 16818 || || | ||||| || || | ||| || || |||| ||||| Sbjct 3917 CTTGTAAAAGTTCCAAATTTCATGGTATCTGATTGGGAACATCACATA 3870 >seq3673 Length=32929 Score = 275 bits (304), Expect = 6e-69 Identities = 583/860 (68%), Gaps = 29/860 (3%) Strand=Plus/Plus Query 15944 TTTTGATATTCACTAACTCTCTTTTCAAAGAAATTTGTTTTTCCTTCTAATGAAATATTT 16003 |||||||| ||| |||||||||||||||||||| ||||| || | || ||||||||| Sbjct 10337 TTTTGATAATCAGAGACTCTCTTTTCAAAGAAATTAGTTTTACCAGCCAAGGAAATATTT 10396 Query 16004 TCCATAAAATCAAAAGGATTTTTTGAACAAT--AGTATTTATCGCATCCCAATTCCAACA 16061 |||||||||||||| || || | |||| | |||| || | ||| || | | | Sbjct 10397 TCCATAAAATCAAATGGGTTGGT--AACATTGTAGTACTTTTTATTTCCAAAAGCTACTA 10454 Query 16062 ATAATCTATCCGCCACAAATTCTATATACTGTTTCATTAAATCACAGTTCATTCCTATTA 16121 ||||||||| || |||||||| | |||||| ||| || ||||| |||||||| | || Sbjct 10455 GTAATCTATCAGCAACAAATTCAACATACTGGCACATCAAGTCACAATTCATTCCCAATA 10514 Query 16122 ATTTAACAGGGATTGCTTCTGTTAAAAAAtttttttCTATATTAACCGCTTCAATGATTA 16181 | || || | || || | ||| | | ||| || |||| ||| || || |||| | Sbjct 10515 AGGATACTGGAAGCGCATCGCTGAAATATTCTTTCTCGATATCAACAGCCTCGGTGATGA 10574 Query 16182 TATCTCTTACTACACTATTT---AACGGAGGGTTTAAT----AAGTGTTTAAACATTATA 16234 | | ||| | | ||||| || || |||||| | || | | ||| | || | Sbjct 10575 TTT-TCTCAAT----TATTTCTGAA--GAAGGTTTATTTTTTAAATATGAAAATAATAAA 10627 Query 16235 CAAGCAAAATCACAATGCAATCCTTCGTCCCTACTTATTAACTCGTTTGAAAATGTAAGA 16294 || ||| |||| || | |||||||| | || ||||| || || |||||||| | Sbjct 10628 CAGGCATAATCTGTGTGAATCCCTTCGTCTCGACAAATTAATTCATTGGAAAATGTCAAC 10687 Query 16295 CCTGGCATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGCAAATGAACCAGAAAAGAAT 16354 || ||||| | || ||||| || | ||| || || || ||||| || ||| || ||| Sbjct 10688 CCCGGCATCAAACCCCGTTTCTTTAACCAGAAAATTGCTGCAAACGAGCCACTGAAAAAT 10747 Query 16355 ATACCTTCAACTGCGGCAAATGCAACCAATCGCTCACCGTACGTTCTAtttttactttct 16414 ||||||||||| || |||||||||||||||| |||| | ||| || | || | Sbjct 10748 ATACCTTCAACAGCAGCAAATGCAACCAATCTCTCAGCATACAAAGCATCCTCGCTCTGG 10807 Query 16415 atccattttttagcccaatttgctttttgtttAACACAGTTCATGTTCTCTATTGCATTA 16474 |||||| | | ||||||| ||||||| | | | | | || || || || |||||| Sbjct 10808 ATCCATCTGATTGCCCAATCGGCTTTTTTTCTTATAAATGGGATATTGTCAATAGCATTA 10867 Query 16475 AATAAATAAtttttttCTTTGCTATCTAAAATATAAGTATCTATTAGTAAACTATACATT 16534 || ||| | | | ||||| | ||| | ||| || ||||||| || ||| | Sbjct 10868 AACAAAAAGTCTGCTTCTTCGGGGTCTTTGAAATATGTTTCTATTAACAACGAATAAGTC 10927 Query 16535 TCTGAATGAATATTCTCCATTGCTATCTGAAAACCATAAAAGCATCTAGCTTCGGATATT 16594 ||||||||||| || ||||| |||||||| |||| | |||| |||| |||| Sbjct 10928 TCTGAATGAATGTTTTCCATCATGATCTGAAACTTGTAAACCAGTTTAGCCTCGGGTATT 10987 Query 16595 TGTACTTCAGAGTAAAACCTTTCTGCTAAGTTTTCGTTAACTATTCCATCGCTAGCTGCA 16654 || ||||| | | || |||| | ||||| || ||||| || ||||| || ||| Sbjct 10988 TGCACTTCTGCACAGAAATTTTCCACCAAGTTCTCATTAACAATACCATCCGATGCAGCA 11047 Query 16655 AAAAACGC---AAGT-ATGTGTTTAATAAAAttt--ttttCGTT-ATCTGAAAGTTTTAA 16707 || || || || | | | | || || ||| |||||||| |||| | || Sbjct 11048 AAGAATGCCAAAACTCGAGAGATAAAGAATCTTTCGTTTTCGTTCATCTTA----TTATT 11103 Query 16708 CCAGTCAGAAAAATCTTTTGATAAATCGACCTCTTCTACAGTCCAAAAAGAAGCAACAGC 16767 ||| ||| |||||||| || || | |||||| ||||||| || || || | | Sbjct 11104 CCAATCATCCAAATCTTTACTCAAGTCAAGCTCTTCAGCAGTCCAGAATGAGGCTAACGA 11163 Query 16768 CTTTTTATACATTTTCCATA 16787 ||||||||| | | ||||| Sbjct 11164 CTTTTTATAGAACTGCCATA 11183 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462485000862000