Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Naumovozyma_20dairenensis_20[genbank_20GCA_5F001074275.1_202015-07- 10] 4,670 sequences; 13,985,759 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq3673 149 6e-31 seq3714 111 1e-19 >seq3673 Length=32929 Score = 149 bits (164), Expect = 6e-31 Identities = 401/609 (66%), Gaps = 12/609 (2%) Strand=Plus/Minus Query 57690 GTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGATTT 57749 || ||||| || || || ||||| |||||||||||||| ||||| ||||| |||| || Sbjct 11061 GTTTTGGCATTCTTTGCTGCATCGGATGGTATTGTTAATGAGAACTTGGTGGAAAATTTC 11002 Query 57750 TCACAAGAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATTGAA 57809 | |||||||||| | | ||||| | | ||||| ||||| | || ||| Sbjct 11001 TGTGCAGAAGTGCAAATACCCGAGGCTAAACTGGTTTACAAGTTTCAGATCATGATGGAA 10942 Query 57810 AACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGACAACGACGAG 57869 ||| | |||||||| | |||||| | | || || || || | || ||| ||| || Sbjct 10941 AACATTCATTCAGAGACTTATTCGTTGTTAATAGAAACATATTTCAAAGACCCCGA--AG 10884 Query 57870 AAACGTAGACT----GTTCAACGCGATCGAAACAATGCCCGCGATCGCCAAGAAGGCAGA 57925 || | ||||| ||| || || || || | || || || || || || || Sbjct 10883 AAGC--AGACTTTTTGTTTAATGCTATTGACAATATCCCATTTATAAGAAAAAAAGCCGA 10826 Query 57926 GTGGTCAATCAAATGGATAAAAAGCGCCACGGCCACGTTCGCCGAGAGGCTAATCGCGTT 57985 ||| |||||| |||||| | |||| || || || ||||| | | || || Sbjct 10825 TTGGGCAATCAGATGGATCCAGAGCGAGGATGCTTTGTATGCTGAGAGATTGGTTGCATT 10766 Query 57986 CGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATGAAGAA 58045 || || || ||||||||||| || ||| ||||| ||||| || ||| | ||||| Sbjct 10765 TGCTGCTGTTGAAGGTATATTTTTCAGTGGCTCGTTTGCAGCAATTTTCTGGTTAAAGAA 10706 Query 58046 ACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAGGGTCT 58105 ||| || ||||||| || |||| ||| ||| || || || | || ||||| || | Sbjct 10705 ACGGGGTTTGATGCCGGGGTTGACATTTTCCAATGAATTAATTTGTCGAGACGAAGGGAT 10646 Query 58106 CCATACTGATTTTGCGTGCCTAATGTACTCTCACATT--GTCAATAAACCGACGCGGGAT 58163 || || |||| ||| || || || | ||| ||| |||||||| | || Sbjct 10645 TCACACAGATTATGCCTGTTTA--TTATTTTCATATTTAAAAAATAAACCTTCTTCAGAA 10588 Query 58164 CGCATCTTGGACATTATCACCGAGGCGGTCGCGATCGAAAATGAGTTTGTCACCGAAGCC 58223 || | | || ||||||||||| || | ||||| || || | | ||| ||| || Sbjct 10587 ATAATTGAGAAAATCATCACCGAGGCTGTTGATATCGAGAAAGAATATTTCAGCGATGCG 10528 Query 58224 CTACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTACATTGAGTTTGTT 58283 || || || || | | || ||||| ||| ||||||| |||| |||| |||||| Sbjct 10527 CTTCCAGTATCCTTATTGGGAATGAATTGTGACTTGATGTGCCAGTATGTTGAATTTGTT 10468 Query 58284 GCCGACAGA 58292 || || ||| Sbjct 10467 GCTGATAGA 10459 >seq3714 Length=15575 Score = 111 bits (122), Expect = 1e-19 Identities = 217/320 (68%), Gaps = 3/320 (1%) Strand=Plus/Plus Query 57534 CGTAGATTTGTCATGTTTCCGATTGAATATCCAGACATTTGGAACATGTACAAAAAGGCA 57593 ||| | | ||| ||||| || || ||| | || ||||||||| | ||||| ||||| Sbjct 3864 CGTCGTTATGTGATGTTCCCAATCAGATACCATGAAATTTGGAACTTTTACAAGAAGGCT 3923 Query 57594 GAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTGTCTAAGGATCTGAGCGATTGGGAT 57653 ||||| || || ||||| | |||||| | || || ||| ||| || || ||| | Sbjct 3924 GAAGCTTCCTTCTGGACTGCTGAAGAAATTGATTTGAGTAAAGATTTGGATGACTGGAAC 3983 Query 57654 TCCC---TCAAAGAATCTGAGAGAAATTTTATTAAACACGTGTTGGCGTTTTTCGCCGCA 57710 | | || ||| ||| ||| |||||||| || ||||| ||||| ||||| Sbjct 3984 AACAAATTAAATGAAAATGAAAGATATTTTATTTCTAGAGTATTGGCATTTTTTGCCGCT 4043 Query 57711 TCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGATTTTCACAAGAAGTGCAAGTGACG 57770 ||||||||||||||| || ||||| | |||| || ||| ||||| ||| | | Sbjct 4044 TCCGATGGTATTGTTGGTGAAAATTTAATTGAAAATTTCTCAACTGAAGTTCAACTTCCT 4103 Query 57771 GAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATTGAAAACGTGCATTCAGAAATGTAT 57830 || || | || || || || || ||| | || |||||| | |||||||||| ||| Sbjct 4104 GAAGCCAAATCATTCTATGGTTTCCAAATCATGATGGAAAACATTCATTCAGAAACCTAT 4163 Query 57831 TCGCTACTCATCGATACGTA 57850 || || | || || || || Sbjct 4164 TCTTTATTGATTGAAACATA 4183 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445740378386400