Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Naumovozyma_20dairenensis_20[genbank_20GCA_5F001074275.1_202015-07-
10] 4,670 sequences; 13,985,759 total letters
Query= NC_004690.1
Length=113220
Score E
Sequences producing significant alignments: (Bits) Value
seq3068 109 4e-19
seq3454 104 2e-17
seq4086 91.5 1e-13
>seq3068
Length=8349
Score = 109 bits (120), Expect = 4e-19
Identities = 104/133 (78%), Gaps = 0/133 (0%)
Strand=Plus/Minus
Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196
|||||||||||||| || || || || | |||||| || ||||| |||||||| ||
Sbjct 133 CCACCTCTCAATCTCAAGACCAAGTGCAAGGTGGATTCCTTTTGGATGTTGTAGTCAGAC 74
Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256
| | |||| ||||||| |||||||| ||||| | ||||| | ||||||||| ||||
Sbjct 73 AAAGTTCTACCGTCTTCCAATTGTTTACCAGCAAAAATCAATCTTTGTTGGTCTGGTGGA 14
Query 15257 ATTCCTTCTTTGT 15269
|| ||||||||||
Sbjct 13 ATACCTTCTTTGT 1
>seq3454
Length=12387
Score = 104 bits (114), Expect = 2e-17
Identities = 101/130 (78%), Gaps = 0/130 (0%)
Strand=Plus/Plus
Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196
|||||||||||||| || || || || | ||| || |||||||| |||||||| ||
Sbjct 12258 CCACCTCTCAATCTCAAGACCAAGTGCAAGGTAGATTCTTTTTGGATGTTGTAGTCAGAC 12317
Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256
| |||| | |||||||||||||| |||||| | ||||| | ||||||||| ||||
Sbjct 12318 AAGGTTCTACCATCTTCTAATTGTTTACCAGCGAAAATCAATCTTTGTTGGTCTGGTGGA 12377
Query 15257 ATTCCTTCTT 15266
|| |||||||
Sbjct 12378 ATACCTTCTT 12387
>seq4086
Length=2763
Score = 91.5 bits (100), Expect = 1e-13
Identities = 100/133 (75%), Gaps = 0/133 (0%)
Strand=Plus/Minus
Query 15234 TCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTT 15293
|||| | ||||||||| |||||| ||||||||||| ||||||| || ||| | |
Sbjct 2763 TCAATCTTTGTTGGTCTGGTGGAATACCTTCTTTGTCTTGAATTTTGGATTTGACATTGT 2704
Query 15294 CTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAA 15353
| || || || | ||| || || ||||||||||||||||| || | ||||| || |
Sbjct 2703 CAATAGTGTCAGAAGATTCAACTTCCAAGGTAATGGTTTTACCAGTTAAGGTTTTGACGA 2644
Query 15354 AAATTTGCATATT 15366
|||||||||| ||
Sbjct 2643 AAATTTGCATCTT 2631
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 362158586344470
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |