Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Naumovozyma_20dairenensis_20[genbank_20GCA_5F001074275.1_202015-07- 10] 4,670 sequences; 13,985,759 total letters Query= NC_005179.1 Length=134721 Score E Sequences producing significant alignments: (Bits) Value seq3714 246 3e-60 seq3673 239 4e-58 >seq3714 Length=15575 Score = 246 bits (272), Expect = 3e-60 Identities = 568/847 (67%), Gaps = 23/847 (3%) Strand=Plus/Minus Query 12859 TTTTTGATATTCGCTAACTCTTTTTTCAAAAAAGTTTGTTTTTCCTTCTAACGAAATATT 12918 ||||||||| || ||||||||||||||| || || || || || | || ||||| || Sbjct 4748 TTTTTGATAGTCTGAAACTCTTTTTTCAAAGAAATTGGTCTTACCGGCCAAGGAAATGTT 4689 Query 12919 TTCCATAAAATCGAAAGGATTTTTCGAACAATAGTAT---TTTTTACACCCTAATTCTAG 12975 |||||| |||||||| ||||| | |||| | |||| || || ||||| | | Sbjct 4688 TTCCATGAAATCGAATGGATTAGT--AACATT-GTATACTTTCTTGTTACCTAAAGCCAA 4632 Query 12976 TAACAATCTGTCAGCAACAAACTCTATGTACTGTTTCATTAAATCACAGTTCATTCCTAT 13035 |||||||| ||||| || || || ||||| || ||| || | ||||||||| || | Sbjct 4631 CAACAATCTATCAGCGACGAATTCAATGTATTGACACATCAAGTTACAGTTCATACCCAA 4572 Query 13036 TAATTTTACAGGCATAGCTTCTGTTAAAAAGtttttttCTATATCAACTGCTTCGATAAC 13095 ||| || || | ||| || || || | | |||||| | |||||| ||||| ||| Sbjct 4571 CAATGACACTGGAAGAGCATCAGTAAAGTATTCTTTTTCAACATCAACAGCTTCAGTAAT 4512 Query 13096 TATGTCTCTTATTACGTTCTCTA---ATGGAGGATTTGATAGATGCTTAAACATCATACA 13152 || |||| || ||||| |||| ||| | ||| ||| | || ||| Sbjct 4511 AAT---TCTTTCAACAATCTCTGGAGATGGTCTATTCTGCAAATGAGCAAATAACAAACA 4455 Query 13153 TGCAAAATCACAGTGCAATCCTTCATCTCTACTTATTAGCTCGTTTGAAAATGTTAGACC 13212 ||||| || ||| || ||||||||||||| || | || ||||| || || | ||| Sbjct 4454 GGCAAAGTCGGTGTGTAAACCTTCATCTCTACAAATCAATTCATTTGAGAAAGTCAAACC 4395 Query 13213 CGGCATAAGCCCTCGTTTTTTAATCCAAAATATAGCAGCAAACGAACCCGaaaaaaaTAT 13272 ||||| | |||| ||||| | ||| || |||| |||||| ||||| || || || Sbjct 4394 TGGCATCAAACCTCTCTTTTTCAACCAGAAAATAGAAGCAAATGAACCACTGAAGAAGAT 4335 Query 13273 TCCTTCAACTGCTGCAAACGCTATCAACCTTTCACCATACGTACTATTTTTACTC-TCT- 13330 |||||||| || ||||| |||| || ||||||||||| || | || || ||| Sbjct 4334 ACCTTCAACAGCAGCAAAAGCTACTAATCTTTCACCATA--TA--AGGCTTCATCATCTT 4279 Query 13331 --ATCCACTTTCTGGCCCAGTTTGCTTTTTGTTTAACGCAGTTCATATTTTCTATTGCGT 13388 ||||| || | ||||| | ||||| | || || || ||||| | || || | Sbjct 4278 GAATCCATTTGATAGCCCAATCAGCTTTCTTTTGAATACATGGAATATTAGCAATGGCAT 4219 Query 13389 TAAATAAATAAtttttttCCTTACTGTCTAAAATATAAGTATCTATCAATAAGCTATACA 13448 | || || |||| || | ||| ||||| || || |||||||| ||| Sbjct 4218 TGAACAAGTAATCAGCCTCTTGGGGATCTTTGATATATGTTTCAATCAATAAAGAATAGG 4159 Query 13449 TTTCTGAATGAATATTTTCCATCGCTATTTGGAAACCATAAAAACATCTAGCCTCTGATA 13508 ||||||||||||| ||||||||| |||||||||||||| || || | || || | | Sbjct 4158 TTTCTGAATGAATGTTTTCCATCATGATTTGGAAACCATAGAATGATTTGGCTTCAGGAA 4099 Query 13509 CCTGAACTTCGGAGTAAAATCTTTCTGCTAAGTTTTCGTTAACTATCCCGTCACTAGCAG 13568 |||||||| | | || |||| ||| ||||| ||| || || || ||| | Sbjct 4098 GTTGAACTTCAGTTGAGAAATTTTCAATTAAATTTTCACCAACAATACCATCGGAAGCGG 4039 Query 13569 CaaaaaaaGCAAGTATGTGCTTAATAAAttttttttCGTTTTC---TGACAACTTTAACC 13625 ||||||| || | || |||||| | | |||| ||||| | | || || Sbjct 4038 CAAAAAATGCCAATACTCTAGAAATAAAATATCTTTCATTTTCATTTAATTTGTTGTTCC 3979 Query 13626 AATCTGGAAAATCTTTTGATAAATCTACCTCCTCAACGGTCCAAAAAGAAGCAACAGCCT 13685 | || |||||||| ||||| | || ||| | ||||| || ||||| |||||| Sbjct 3978 AGTCATCCAAATCTTTACTCAAATCAATTTCTTCAGCAGTCCAGAAGGAAGCTTCAGCCT 3919 Query 13686 TCTTATA 13692 |||| || Sbjct 3918 TCTTGTA 3912 >seq3673 Length=32929 Score = 239 bits (264), Expect = 4e-58 Identities = 572/854 (67%), Gaps = 17/854 (2%) Strand=Plus/Plus Query 12860 TTTTGATATTCGCTAACTCTTTTTTCAAAAAAGTTTGTTTTTCCTTCTAACGAAATATTT 12919 |||||||| || ||||| |||||||| || || ||||| || | || ||||||||| Sbjct 10337 TTTTGATAATCAGAGACTCTCTTTTCAAAGAAATTAGTTTTACCAGCCAAGGAAATATTT 10396 Query 12920 TCCATAAAATCGAAAGGATTTTTCGAACAAT--AGTATTTTTTACACCCTAATTCTAGTA 12977 ||||||||||| || || || | |||| | |||| |||||| || || ||| || Sbjct 10397 TCCATAAAATCAAATGGGTTGGT--AACATTGTAGTACTTTTTATTTCCAAAAGCTACTA 10454 Query 12978 ACAATCTGTCAGCAACAAACTCTATGTACTGTTTCATTAAATCACAGTTCATTCCTATTA 13037 ||||| ||||||||||| || | ||||| ||| || ||||| |||||||| | || Sbjct 10455 GTAATCTATCAGCAACAAATTCAACATACTGGCACATCAAGTCACAATTCATTCCCAATA 10514 Query 13038 ATTTTACAGGCATAGCTTCTGTTAAAAAGtttttttCTATATCAACTGCTTCGATAACTA 13097 | ||| || | || || | ||| | | ||| || |||||||| || ||| | | | Sbjct 10515 AGGATACTGGAAGCGCATCGCTGAAATATTCTTTCTCGATATCAACAGCCTCGGTGATGA 10574 Query 13098 TGTCTCTTA-TTACGTTCTCTAATGGAGG---ATTTGATAGATGCTTAAACATCATACAT 13153 | | ||| | ||| | ||| | | ||| |||| || || ||| | | ||| Sbjct 10575 TTT-TCTCAATTA---TTTCTGAAGAAGGTTTATTTTTTAAATATGAAAATAATAAACAG 10630 Query 13154 GCAAAATCACAGTGCAATCCTTCATCTCTACTTATTAGCTCGTTTGAAAATGTTAGACCC 13213 ||| |||| ||| | ||||| |||| || |||| || || |||||||| | ||| Sbjct 10631 GCATAATCTGTGTGAATCCCTTCGTCTCGACAAATTAATTCATTGGAAAATGTCAACCCC 10690 Query 13214 GGCATAAGCCCTCGTTTTTTAATCCAAAATATAGCAGCAAACGAACCCGaaaaaaaTATT 13273 ||||| | || ||||| || | ||| || || || |||||||| || |||||||| Sbjct 10691 GGCATCAAACCCCGTTTCTTTAACCAGAAAATTGCTGCAAACGAGCCACTGAAAAATATA 10750 Query 13274 CCTTCAACTGCTGCAAACGCTATCAACCTTTCACCATACGTACTATTTTTACTCTCTATC 13333 |||||||| || ||||| || | ||| || ||| ||||| | || | |||| ||| Sbjct 10751 CCTTCAACAGCAGCAAATGCAACCAATCTCTCAGCATACAAAGCATCCTCGCTCTGGATC 10810 Query 13334 CACTTTCTGGCCCAGTTTGCTTTTTGTTTAACGCAGTTCATATTTTCTATTGCGTTAAAT 13393 || | | ||||| | ||||||| | | | | ||||| || || || ||||| Sbjct 10811 CATCTGATTGCCCAATCGGCTTTTTTTCTTATAAATGGGATATTGTCAATAGCATTAAAC 10870 Query 13394 AAATAAtttttttCCTTACTGTCTAAAATATAAGTATCTATCAATAAGCTATACATTTCT 13453 ||| | | | ||| | |||| | ||| || ||||| || || ||| | ||| Sbjct 10871 AAAAAGTCTGCTTCTTCGGGGTCTTTGAAATATGTTTCTATTAACAACGAATAAGTCTCT 10930 Query 13454 GAATGAATATTTTCCATCGCTATTTGGAAACCATAAAAACA-TCTAGCCTCTGATACCTG 13512 |||||||| ||||||||| || | ||||| ||| || | ||||||| | || || Sbjct 10931 GAATGAATGTTTTCCATCATGATCT-GAAACTTGTAAACCAGTTTAGCCTCGGGTATTTG 10989 Query 13513 AACTTCGGAGTAAAATCTTTCTGCTAAGTTTTCGTTAACTATCCCGTCACTAGCAGCaaa 13572 ||||| | | || |||| | ||||| || ||||| || || || |||||||| Sbjct 10990 CACTTCTGCACAGAAATTTTCCACCAAGTTCTCATTAACAATACCATCCGATGCAGCAAA 11049 Query 13573 aaaaGCAAGTATGTGCTTAATAAAttttttttCGTTTTCTGACAACT--TTA-ACCAATC 13629 || || | | | ||||| | |||||||||| || || ||| |||||| Sbjct 11050 GAATGCCAAAACTCGAGAGATAAAGAATCTTTCGTTTTCGTTCATCTTATTATTCCAATC 11109 Query 13630 TGGAAAATCTTTTGATAAATCTACCTCCTCAACGGTCCAAAAAGAAGCAACAGCCTTCTT 13689 |||||||| || || | ||| ||| | ||||| || || || | | ||| || Sbjct 11110 ATCCAAATCTTTACTCAAGTCAAGCTCTTCAGCAGTCCAGAATGAGGCTAACGACTTTTT 11169 Query 13690 ATACATCATCCATA 13703 ||| | | ||||| Sbjct 11170 ATAGAACTGCCATA 11183 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430957870367340