Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Naumovozyma_20dairenensis_20[genbank_20GCA_5F001074275.1_202015-07- 10] 4,670 sequences; 13,985,759 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq3714 260 3e-64 seq3673 152 1e-31 seq3068 95.1 3e-14 seq3454 93.3 1e-13 >seq3714 Length=15575 Score = 260 bits (288), Expect = 3e-64 Identities = 611/906 (67%), Gaps = 37/906 (4%) Strand=Plus/Plus Query 268705 TGTGATATTTCCAATACAGC-ATGGTGATATATGGAGGATGTACAAACAGGCCGTTGCTT 268763 |||||| || ||||| ||| | ||| || |||| | ||||| |||| | |||| Sbjct 3872 TGTGATGTTCCCAAT-CAGATACCATGAAATTTGGAACTTTTACAAGAAGGCTGAAGCTT 3930 Query 268764 CTTTTTGGACTGTAGAAGAAGTAGATCTGTCTTATGACTTAATAGATTGGAAAAAT---T 268820 | || ||||||| |||||| | ||| || | | || || || ||||| || | Sbjct 3931 CCTTCTGGACTGCTGAAGAAATTGATTTGAGTAAAGATTTGGATGACTGGAACAACAAAT 3990 Query 268821 TAAAACCAGAAGAAAGAAGATTTATATCTTATATTCTTG-CGTTTTTTGCAGTTAGTGAT 268879 |||| | | |||||| ||||| ||| | | | ||| | |||||||| | | ||| Sbjct 3991 TAAATGAAAATGAAAGATATTTTATTTCT-AGAGTATTGGCATTTTTTGCCGCTTCCGAT 4049 Query 268880 GGTATCGTTAACGAAAATCTAGTAGAGAAGTTCTGTCAA--GAGGTACAGATTCCTGAAG 268937 ||||| ||| |||||| || | || || |||| ||| || || || ||||||||| Sbjct 4050 GGTATTGTTGGTGAAAATTTAATTGAAAATTTCT--CAACTGAAGTTCAACTTCCTGAAG 4107 Query 268938 CCAGATGTTTTTACGGATTCCAGATAGCTATAGAAAATATTCATTCAGAGATGTACAGTC 268997 ||| || || || || ||||| || || ||||| ||||||||||| | || | Sbjct 4108 CCAAATCATTCTATGGTTTCCAAATCATGATGGAAAACATTCATTCAGAAACCTATTCTT 4167 Query 268998 TATTAATAGATACTTATATAGATGATAACAACGAAAAGAAAAGACT-ATT--TTCTTCTA 269054 |||| || || || ||||| | ||| | | || | || ||| || ||| | Sbjct 4168 TATTGATTGAAACATATATCAAAGATCCCCAAGA--------GGCTGATTACTTGTTCAA 4219 Query 269055 TGAGA-----ACTATGGACTGTGTGAGaaaaaaaTCTGAATGGGCTCTGAAATGGATAAA 269109 || | | ||| ||| | ||| ||| |||| |||||| | |||||||| | Sbjct 4220 TGCCATTGCTAATATTCCATGTATTCAAAAGAAAGCTGATTGGGCTATCAAATGGATTCA 4279 Query 269110 CGATAGCGC-GCCTTAC--GGAGAAAGGTTAGTTGCTTTTGCCGCTGTAGAAGGTATATT 269166 ||| | |||||| || ||||| ||||| |||||||| ||||| |||||||| || Sbjct 4280 AGATGATGAAGCCTTATATGGTGAAAGATTAGTAGCTTTTGCTGCTGTTGAAGGTATCTT 4339 Query 269167 CTTTTCGGGGTCTTTTGCCGCTATCTTTTGGTTGAAGAAAAGAGGCCTTATGCCAGGATT 269226 ||| || || ||||| |||| || |||||||| || ||||| | |||||||| || Sbjct 4340 CTTCAGTGGTTCATTTGCTTCTATTTTCTGGTTGAAAAAGAGAGGTTTGATGCCAGGTTT 4399 Query 269227 AACTTTCTCTAACGAATTGATAAGCAGGGACGAAGGTTTACACTGCGACTTCGCTTGTTT 269286 |||||||| || |||||||| | || || |||||||||||| |||||| || ||||| Sbjct 4400 GACTTTCTCAAATGAATTGATTTGTAGAGATGAAGGTTTACACACCGACTTTGCCTGTTT 4459 Query 269287 ATTATTTACTAATTATCTTTCA-CACAAACCTTCTCAAGATAGAGTATACGAAATTATAG 269345 |||||| || || || || | | ||| |||| ||| | || | |||||| Sbjct 4460 GTTATTTGCTCAT----TTGCAGAATAGACCATCTCCAGAGATTGTTGAAAGAATTATTA 4515 Query 269346 ATTCAGCTGTTTCTGTAGAAACAGAATTTCTAACGGAAGCTCTATCTATCGATCTT-ATC 269404 | ||||||| ||| |||| ||||| | || || ||||| || | | || | Sbjct 4516 CTGAAGCTGTTGATGTTGAAAAAGAATACTTTACTGATGCTCT-TCCAGTGTCATTGTTG 4574 Query 269405 GGTATGAATAGCAAATCGATGATAGAATATATTAAGTTCGTATCTGATAGATTGCTGGTG 269464 |||||||| | || | |||| |||| ||| | ||||| ||||||||||| || || Sbjct 4575 GGTATGAACTGTAACTTGATGTGTCAATACATTGAATTCGTCGCTGATAGATTGTTGTTG 4634 Query 269465 TCTTTAGGGTTTAGTAAAAAATATAACGTTGAAAATCCGTTTAGTTTTATGGAGAATATA 269524 ||||||| | ||| ||| || ||| ||||| || ||| ||||| || || Sbjct 4635 GCTTTAGGTAACAAGAAAGTATACAATGTTACTAATCCATTCGATTTCATGGAAAACATT 4694 Query 269525 TCATTAGAAGGTAAGGCTAATTTCTTCGAGAAGCGGGTAAGTAACTATCAGAAAATGGGT 269584 || || | |||||| | |||||||| || || | || ||||||| ||| ||| Sbjct 4695 TCCTTGGCCGGTAAGACCAATTTCTTTGAAAAAAGAGTTTCAGACTATCAAAAAGCTGGT 4754 Query 269585 GTAATG 269590 || ||| Sbjct 4755 GTTATG 4760 >seq3673 Length=32929 Score = 152 bits (168), Expect = 1e-31 Identities = 580/899 (65%), Gaps = 31/899 (3%) Strand=Plus/Minus Query 268709 ATATTTCCAATACAGCATGGTGATATATGGAGGATGTACAAACAGGCCGTTGCTTCTTTT 268768 |||| ||||||| || || || ||||| | | || ||| || | | || || || Sbjct 11208 ATATATCCAATAAAGTATCCCGAGTTATGGCAGTTCTATAAAAAGTCGTTAGCCTCATTC 11149 Query 268769 TGGACTGTAGAAGAAGTAGATCTGTCTTATGACTTAATAGATTGGAAAAATTTAA--AAC 268826 ||||||| ||||| | || || | | || || |||||||| ||| | ||| Sbjct 11148 TGGACTGCTGAAGAGCTTGACTTGAGTAAAGATTTGGATGATTGGAATAATAAGATGAAC 11089 Query 268827 CAGAA-GAAAGAAGATTTATATCTTATATTCTTGCGTTTTTTGCAGTTAGTGATGGTATC 268885 | || |||||| ||||| ||| || | || || ||||| | |||||||| Sbjct 11088 GAAAACGAAAGATTCTTTATCTCTCGAGTTTTGGCATTCTTTGCTGCATCGGATGGTATT 11029 Query 268886 GTTAACGAAAATCTAGTAGAGAAGTTCTGTCAAGAGGTACAGATTCCTGAAGCCAGATGT 268945 ||||| || || | || || || |||||| ||| || || || || || || | | Sbjct 11028 GTTAATGAGAACTTGGTGGAAAATTTCTGTGCAGAAGTGCAAATACCCGAGGCTAAACTG 10969 Query 268946 TTTTACGGATTCCAGATAGCTATAGAAAATATTCATTCAGAGATGTACAGTCTATTAATA 269005 ||||| || ||||| || ||||| ||||||||||||| || | |||||| Sbjct 10968 GTTTACAAGTTTCAGATCATGATGGAAAACATTCATTCAGAGACTTATTCGTTGTTAATA 10909 Query 269006 GATACTTATATAGATGATAACAACGAAAAGAAAAGACTATTTTCTT----CTAT-GAGAA 269060 || || ||| | | || | |||| | | ||||| ||| || |||| || || Sbjct 10908 GAAACATATTTCAAAGA---CCCCGAAGA-AGCAGACTTTTTGTTTAATGCTATTGACAA 10853 Query 269061 CTATGGACTGTGTGAGaaaaaaaTCTGAATGGGCTCTGAAATGGATAAACGATAGCGCGC 269120 ||| | | | ||||||||| | || ||||| | | |||||| | | |||| | Sbjct 10852 -TATCCCATTTATAAGAAAAAAAGCCGATTGGGCAATCAGATGGAT---CCAGAGCGAGG 10797 Query 269121 CT------TACGGAGAAAGGTTAGTTGCTTTTGCCGCTGTAGAAGGTATATTCTTTTCGG 269174 | || | || || || ||||| ||||| ||||| ||||||||||| || | Sbjct 10796 ATGCTTTGTATGCTGAGAGATTGGTTGCATTTGCTGCTGTTGAAGGTATATTTTTCAGTG 10737 Query 269175 GGTCTTTTGCCGCTATCTTTTGGTTGAAGAAAAGAGGCCTTATGCCAGGATTAACTTTCT 269234 | || ||||| || || || ||||| |||||| | || | ||||| || || || || | Sbjct 10736 GCTCGTTTGCAGCAATTTTCTGGTTAAAGAAACGGGGTTTGATGCCGGGGTTGACATTTT 10677 Query 269235 CTAACGAATTGATAAGCAGGGACGAAGGTTTACACTGCGACTTCGCTTGTTTATTATTTA 269294 | || ||||| || | | |||||||| | ||| || | || |||||||||||| Sbjct 10676 CCAATGAATTAATTTGTCGAGACGAAGGGATTCACACAGATTATGCCTGTTTATTATTTT 10617 Query 269295 CTAATTATCTTTCACACAAACCTTCTCAAGATAGAGTATACGAAATTATAGATTCAGCTG 269354 | ||| | | | ||||||||| ||| | | | | |||| || |||| Sbjct 10616 C---ATATTTAAAAAATAAACCTTCTTCAGAAATAATTGAGAAAATCATCACCGAGGCTG 10560 Query 269355 TTTCTGTAGAAACAGAATTTCTAACGGAAGCTCTATC--TATCGATCTTA-TCGGTATGA 269411 || | | || | ||||| | | | || || || | |||| |||| | || |||| Sbjct 10559 TTGATATCGAGAAAGAATATTTCAGCGATGCGCTTCCAGTATC---CTTATTGGGAATGA 10503 Query 269412 ATAGCAAATCGATGATAGAATATATTAAGTTCGTATCTGATAGATTGCTGGTGTCTTTAG 269471 || | | | |||| | ||| || | || || |||||||||| || || |||| | Sbjct 10502 ATTGTGACTTGATGTGCCAGTATGTTGAATTTGTTGCTGATAGATTACTAGTAGCTTTTG 10443 Query 269472 GGTTTAGTAAAAAATATAACGTTGAAAATCCGTTTAGTTTTATGGAGAATATATCATTAG 269531 | || || | || || ||| || || ||| ||||||||| ||||| || || | Sbjct 10442 GAAATAAAAAGTACTACAATGTTACCAACCCATTTGATTTTATGGAAAATATTTCCTTGG 10383 Query 269532 AAGGTAAGGCTAATTTCTTCGAGAAGCGGGTAAGTAACTATCAGAAAATGGGTGTAATG 269590 ||||| |||||||||| || ||| | || | | ||||| || ||||| ||| Sbjct 10382 CTGGTAAAACTAATTTCTTTGAAAAGAGAGTCTCTGATTATCAAAAGGCTGGTGTGATG 10324 >seq3068 Length=8349 Score = 95.1 bits (104), Expect = 3e-14 Identities = 85/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 104357 TGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGT 104416 || || || ||||| || || || || |||||||| | ||||||||||||||| | |||| Sbjct 109 TGCAAGGTGGATTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTACCGTCTTCCAATTGT 50 Query 104417 TTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTT 104463 || ||||||||||| | || ||||| || || || || |||||||| Sbjct 49 TTACCAGCAAAAATCAATCTTTGTTGGTCTGGTGGAATACCTTCTTT 3 >seq3454 Length=12387 Score = 93.3 bits (102), Expect = 1e-13 Identities = 84/106 (79%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 104357 TGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGT 104416 || || ||||||||||| || || || |||||||| | |||||||| ||||||| |||| Sbjct 12282 TGCAAGGTAGATTCTTTTTGGATGTTGTAGTCAGACAAGGTTCTACCATCTTCTAATTGT 12341 Query 104417 TTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTT 104462 || ||||| ||||| | || ||||| || || || || ||||||| Sbjct 12342 TTACCAGCGAAAATCAATCTTTGTTGGTCTGGTGGAATACCTTCTT 12387 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151329506796360