Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Naumovozyma_20dairenensis_20[genbank_20GCA_5F001074275.1_202015-07- 10] 4,670 sequences; 13,985,759 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq3520 226 3e-54 seq3577 150 2e-31 seq884 91.5 2e-13 >seq3520 Length=28158 Score = 226 bits (250), Expect = 3e-54 Identities = 424/625 (68%), Gaps = 65/625 (10%) Strand=Plus/Minus Query 6694 ATAGCTGGATGAGGATTATAATCTAACAATT-CAAAATCTTCAAATTTAAAATCAC--AT 6750 |||| ||||| || | ||| || ||| ||| | ||||||||||||||||||||| || Sbjct 21202 ATAGGTGGATATGGTTCATA-TCCAACTATTTCGAAATCTTCAAATTTAAAATCATCAAT 21144 Query 6751 AAATT--ATCAGACtttttttttAATATT-----AC-AACAGGTGAAGGT-TTTATTGAT 6801 | | | ||| | ||||| ||| | || || || | ||| | |||| ||| Sbjct 21143 AGACTTAATCTCATTTTTTCTTTCCTCTTTGATAACTAATTTGGGAAATTGTTTAGGGAT 21084 Query 6802 CGAGTTAA-TTGTTCTTTTATAGCTTTTATATGATCTAAATAAATATGAGCATCTCCTAG 6860 | || ||||||||||| || | |||||| || ||||| | ||| ||||| |||| Sbjct 21083 TCTTTCAAATTGTTCTTTTAAGGCATCTATATGGTCCAAATAGACATGTGCATCACCTAA 21024 Query 6861 CGTATGAATAAATTCACCTGGTTTCATATCAACAGCTTGAGCAATTAAATATGTTAATAA 6920 ||||||||||||||||| | |||||| || | || ||||| | | |||||||| Sbjct 21023 AGTATGAATAAATTCACCACAGTCCATATCCACCACATGTGCAATCATCTTGGTTAATAA 20964 Query 6921 TGCATAAGAAGCTACATTAAAAGGTACACCTAATCCCATATCTGCTGATCTTTGATAACA 6980 || || || || | |||||| ||||||||||| |||||||| || |||||||| | Sbjct 20963 AGCGTAGGATGCAATATTAAATGGTACACCTAACCCCATATCACAAGACCTTTGATACAA 20904 Query 6981 TTGACAAGATAA------------------------------AATATT---GTC------ 7001 | ||||||||| | |||| ||| Sbjct 20903 TAAACAAGATAATTTTGGTTTGGCCGTTTTAGCTTGTTTAGGATTATTTGGGTCCGGCAG 20844 Query 7002 ---TATAG---------CATAAAATTGACACAATACATGACATGGAGGTAAAACAGCCTG 7049 | ||| ||||||||||||| || || ||||||||||| || | | Sbjct 20843 AGATGTAGGGAAATTCACATAAAATTGACAGAAAACGTGACATGGAGGCAAGGCCATTTT 20784 Query 7050 ATCTATATCAGATGGATTCCAAGCAGTCATTAAAATACGTCTATCATTTGGATTTGTTTT 7109 | | | ||| | ||||||||||||| ||| | ||| | |||||||| |||||||||||| Sbjct 20783 AGCAAAATCTGGCGGATTCCAAGCAGACATGATAATTCTTCTATCATATGGATTTGTTTT 20724 Query 7110 TAATTTTGTTATAATTATTTGTAATTGATCTATACCCTGACCTTCATAATTAGTATGACA 7169 |||||| | |||| |||||||||||| | || ||||| ||||| | || ||| Sbjct 20723 CAATTTTTTAATAACGTCTTGTAATTGATCAAATCCTTGACCGGTATAATCGGAATCACA 20664 Query 7170 ATTTATATAATTAGCTCCAAAATGTCTCCATTGAAACCCATAAATAGGACCTAAATCACC 7229 || | |||| | |||||||||||||||||||| ||||| |||| || || ||||| || Sbjct 20663 ATCTTTATATTCTGCTCCAAAATGTCTCCATTGGAACCCGTAAACTGGTCCCAAATCTCC 20604 Query 7230 TTCTTCACGATGATTAAATCCTAAT 7254 ||| ||||||| | || |||||| Sbjct 20603 TTCACGACGATGAGTCAACCCTAAT 20579 >seq3577 Length=2981 Score = 150 bits (166), Expect = 2e-31 Identities = 320/475 (67%), Gaps = 21/475 (4%) Strand=Plus/Plus Query 164495 aaaaaTTAGGCTGTAAACATATAAAAGGAATTTTATTACATGGACCTCCTGGTTGCGGTA 164554 ||||||| | | ||||||| ||||| | |||||| | |||||||| ||| |||| Sbjct 1294 AAAAATTGGATTATAAACATTGTAAAGGGTTATTATTATACGGACCTCCAGGTACTGGTA 1353 Query 164555 AAACATTAATGGCTCGATGCATTGCTCAAGCTTTTAAATCGC---GACCCGTTAAAATTG 164611 |||| || || ||||| | ||| || | | ||| | || || |||||||| Sbjct 1354 AAACGTTGATTGCTCG-TAAATTATCGAAAATGCTTAATGGTAAAGAACC--TAAAATTG 1410 Query 164612 TTAATGGTCCTGAATTATTGAACAAATATGTAGGTGAGTCAGAAGCTAATGTTAGAAAGT 164671 | |||||||| ||| | |||| |||||||| |||| ||||||| ||| || | || | Sbjct 1411 TCAATGGTCCAGAAATGTTGAGTAAATATGTTGGTGCATCAGAAGAAAATATTCGTAATT 1470 Query 164672 TGTTTCAGGAGGCTGAAGAAGAACAAAAGAAAGCAGGTTTAGCTAGTAAATTACATGTTA 164731 ||||| | || ||||||| |||| | || | |||| || | | |||||||||| Sbjct 1471 TGTTTAAAGATGCTGAAGCAGAATATAAATTAAAAGGTGAAGATTCAGATTTACATGTTA 1530 Query 164732 TTGTTTTTGATGAGATAGAT--GCTCTTT--GCAAA-----------AAACGTGGTGATA 164776 || |||| ||||| | ||| | | ||| |||| ||| | || || Sbjct 1531 TTATTTTCGATGAATTGGATTCGGTATTTAAACAAAGAGGATCAGGGAAATCCGATGGTA 1590 Query 164777 ATATTATTCATGATGCAGTGGTTAATCAGTTGCTTTCTAAAATAGATGGTGTAGAATCCT 164836 | | || |||| || || ||||| || | || ||||| |||||||| || | Sbjct 1591 CTGGTGTTGGTGATAATGTTGTCAATCAATTATTATCGAAAATGGATGGTGTTGATCAAT 1650 Query 164837 TAAATAATATTTTAATTGTAGGTATGACCAACCGACCTGATTTAATTGATGATGCTTTAT 164896 | ||||||||||| | | |||||||| || || ||||| || ||| ||||||| Sbjct 1651 TGAATAATATTTTGGTGATTGGTATGACTAATCGTTTGGATTTGATCGATACAGCTTTAT 1710 Query 164897 TACGACCTGGTCGATTAGAATTGAAAATAGAAATAGGATTACCCGACAAAGAAGG 164951 || |||||||| |||| ||| | |||| ||||| ||||| || || |||| Sbjct 1711 TAAGACCTGGTAGATTTGAAATTCAAATTGAAATTTCCTTACCTGATGAAAAAGG 1765 >seq884 Length=30835 Score = 91.5 bits (100), Expect = 2e-13 Identities = 115/158 (73%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 19350 CTAAAATACCTGAAATAGGTGATAAGTTTGCTTCTTTTACTGCTCAAAAAGGCACATGTG 19409 ||||| | || |||| || ||||| |||||||| | ||||||||| || || Sbjct 17862 CTAAAGTTCCACAAATTGGGGATAAATTTGCTTCGAGACACGGTCAAAAAGGTACTATTG 17803 Query 19410 GTATGATTTATCGTCAAGAAGATATGCCTTTTACTAAAGATGGTATAGTGCCGGATCTTA 19469 || | | ||| | || ||||||||||||||||| ||| ||||| || || || | | Sbjct 17802 GTGTTACCTATAGACACGAAGATATGCCTTTTACAGCAGAAGGTATTGTTCCAGACTTAA 17743 Query 19470 TTATTAACCCACATGCTTTTCCAAGTCGAATGACGCTT 19507 | |||||||| |||||| ||||| ||| |||||| || Sbjct 17742 TCATTAACCCTCATGCTATTCCATCTCGTATGACGGTT 17705 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595837215972000