Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Naumovozyma_20dairenensis_20[genbank_20GCA_5F001074275.1_202015-07- 10] 4,670 sequences; 13,985,759 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq3068 109 5e-19 seq3454 95.1 1e-14 seq4086 82.4 7e-11 >seq3068 Length=8349 Score = 109 bits (120), Expect = 5e-19 Identities = 110/142 (77%), Gaps = 1/142 (1%) Strand=Plus/Minus Query 94772 TTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTA 94831 |||||| | || |||||||||| ||| ||||||||||| || ||||||||||| | ||| Sbjct 141 TTTTAC-CACCACCTCTCAATCTCAAGACCAAGTGCAAGGTGGATTCCTTTTGGATGTTG 83 Query 94832 TAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGA 94891 || || || ||| | || |||| ||||| || |||| || |||||||| || Sbjct 82 TAGTCAGACAAAGTTCTACCGTCTTCCAATTGTTTACCAGCAAAAATCAATCTTTGTTGG 23 Query 94892 TCTGGAGGAATACCTTCTTTGT 94913 ||||| |||||||||||||||| Sbjct 22 TCTGGTGGAATACCTTCTTTGT 1 >seq3454 Length=12387 Score = 95.1 bits (104), Expect = 1e-14 Identities = 109/147 (74%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 94764 TTTTAAAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTT 94823 || ||||| ||| | || |||||||||| ||| ||||||||||| |||||||| |||| Sbjct 12241 TTATAAAAAATTAGAAACCACCTCTCAATCTCAAGACCAAGTGCAAGGTAGATTCTTTTT 12300 Query 94824 GCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATC 94883 | | ||| || || || || | ||| || | ||||| || | || || |||| Sbjct 12301 GGATGTTGTAGTCAGACAAGGTTCTACCATCTTCTAATTGTTTACCAGCGAAAATCAATC 12360 Query 94884 TTTGCTGATCTGGAGGAATACCTTCTT 94910 |||| || ||||| ||||||||||||| Sbjct 12361 TTTGTTGGTCTGGTGGAATACCTTCTT 12387 >seq4086 Length=2763 Score = 82.4 bits (90), Expect = 7e-11 Identities = 95/128 (74%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 94880 AATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCG 94939 |||||||| || ||||| ||||||||||||||||| | |||||| | ||||| | | Sbjct 2761 AATCTTTGTTGGTCTGGTGGAATACCTTCTTTGTCTTGAATTTTGGATTTGACATTGTCA 2702 Query 94940 ACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAG 94999 | |||||||| || || || | || |||||||| ||||| | ||||| || || Sbjct 2701 ATAGTGTCAGAAGATTCAACTTCCAAGGTAATGGTTTTACCAGTTAAGGTTTTGACGAAA 2642 Query 95000 ATCTGCAT 95007 || ||||| Sbjct 2641 ATTTGCAT 2634 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448265031001200