Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Naumovozyma_20dairenensis_20[genbank_20GCA_5F001074275.1_202015-07- 10] 4,670 sequences; 13,985,759 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq3714 257 2e-63 seq3673 159 4e-34 >seq3714 Length=15575 Score = 257 bits (284), Expect = 2e-63 Identities = 646/983 (66%), Gaps = 26/983 (3%) Strand=Plus/Minus Query 21126 TTTAAAAATCAGCATCTAATGAGAAAACATTATCTTCttttttt---------GACATAA 21176 |||| ||||| |||| || | ||| ||| ||||||| ||| | ||||| Sbjct 4815 TTTAGAAATCTTCATCAAAAGTAAAAGCATCGGCTTCTTTGTTTTCGGTCTTGGCCATAA 4756 Query 21177 TTCCCATTTTTTGATAATCACTAACTCTTTTTTCGAAAAAATTTGTCTTTCCTTCCAATG 21236 || ||||||||| || |||||||||||| || ||||| ||||| || |||| | Sbjct 4755 CACCAGCTTTTTGATAGTCTGAAACTCTTTTTTCAAAGAAATTGGTCTTACCGGCCAAGG 4696 Query 21237 ATATAGATTCCATAAAATCAAATGGATTTTCAGATTTAAATATTTTATTACAACCCAGTT 21296 | || |||||| ||||| |||||||| | || ||| ||| || ||| | Sbjct 4695 AAATGTTTTCCATGAAATCGAATGGATTAGTAACATTGTATACTTTCTTGTTACCTAAAG 4636 Query 21297 CTGATAATAATCTATCTGCTACAAATTCTATATATTGACACATTAATTCACAATTCATAC 21356 | | || |||||||| || || ||||| || ||||||||||| || | ||| ||||||| Sbjct 4635 CCAACAACAATCTATCAGCGACGAATTCAATGTATTGACACATCAAGTTACAGTTCATAC 4576 Query 21357 CGATCAATTTTACAGGAAGAGCTTTTGTCAAAAAAGATTTTTCTATAGAGACGGCTTCAA 21416 | | |||| || |||||||| | || || | |||||| | | || |||||| Sbjct 4575 CCAACAATGACACTGGAAGAGCATCAGTAAAGTATTCTTTTTCAACATCAACAGCTTCAG 4516 Query 21417 CAATTATATTT---ATTATC-CT--AGATGTACTAGGGGGATACAATAATTGTTTAAACA 21470 ||| || || | ||| || ||||| ||| | | || || ||| | Sbjct 4515 TAATAATTCTTTCAACAATCTCTGGAGATGGTCTA------TTCTGCAAATGAGCAAATA 4462 Query 21471 TCAAACATGCAAAATCACAATGCAAACCTTCATCCCTACTTATTAATTCATTAGAAAATG 21530 |||||| ||||| || || ||||||||||| |||| || |||||||| || || | Sbjct 4461 ACAAACAGGCAAAGTCGGTGTGTAAACCTTCATCTCTACAAATCAATTCATTTGAGAAAG 4402 Query 21531 TTAAACCGGGCATTAATCCTCTCTTTTTTAACCAAAATATTGACGCAAATGCTCCTGAAA 21590 | ||||| ||||| || ||||||||||| ||||| || || || ||||||| || | Sbjct 4401 TCAAACCTGGCATCAAACCTCTCTTTTTCAACCAGAAAATAGAAGCAAATGAACCACTGA 4342 Query 21591 AGAAAATGCCCTCAACGGCAGCAAATGCAACTAATCGTTCACCGTATGTAGATTCTTTAT 21650 |||| || || ||||| |||||||| || ||||||| |||||| ||| | ||| | || Sbjct 4341 AGAAGATACCTTCAACAGCAGCAAAAGCTACTAATCTTTCACCATATAAGGCTTCATCAT 4282 Query 21651 CCAATATCCATTTTTCTGCCCATTTTGCCTTTTCTTTAATACAATCAATTGTATCAATAG 21710 | |||||||| ||||| | || || | || |||||| ||| || |||| | Sbjct 4281 CTTGAATCCATTTGATAGCCCAATCAGCTTTCTTTTGAATACATGGAATATTAGCAATGG 4222 Query 21711 CTTTTAAAAGATGAtttttttCATCTACATCGGTTATGNNNNNNNNNNNNNNNNNACTAT 21770 | || || | | || || | ||| | || | || Sbjct 4221 CATTGAACAAGTAATCAGCCTCTTGGGGATCTTTGATATATGTTTCAATCAATAAAGAAT 4162 Query 21771 ACATTTCAGAATGTATATTTTCTATCGCTATCTGAAATCCGTAAAAACATCTTGCCTCTG 21830 | |||| ||||| || ||||| ||| || || || || || || || | || || | Sbjct 4161 AGGTTTCTGAATGAATGTTTTCCATCATGATTTGGAAACCATAGAATGATTTGGCTTCAG 4102 Query 21831 AACATTGAACCTCGGAATAAAATCGTTGAGCCAAGTTTTCATTTACTATTCCATCACTGG 21890 | |||||| || | | || || | || |||||| || || ||||| | Sbjct 4101 GAAGTTGAACTTCAGTTGAGAAATTTTCAATTAAATTTTCACCAACAATACCATCGGAAG 4042 Query 21891 CGGCAAAAAATGCCAATATATTTTTTATAAAATATCGTTCGTTATCTGTTAAT---TTTT 21947 |||||||||||||||||| | |||||||||| ||| || || ||||| || | Sbjct 4041 CGGCAAAAAATGCCAATACTCTAGAAATAAAATATCTTTCATTTTCATTTAATTTGTTGT 3982 Query 21948 TCCAATCTAATAAATCTTTTGATAAATCTACTTCTTCAGTTGTCCAAAAGCTAGCAATAG 22007 |||| || |||||||| ||||| | |||||||| ||||| ||| ||| || Sbjct 3981 TCCAGTCATCCAAATCTTTACTCAAATCAATTTCTTCAGCAGTCCAGAAGGAAGCTTCAG 3922 Query 22008 CCTTTTTATACATAATCCAGATATCATTATATATTATTGGAAATATTACAAACCTGTTAT 22067 |||| || || | |||| || |||| ||| | ||||| || || ||| | | | | Sbjct 3921 CCTTCTTGTAAAAGTTCCAAATTTCATGGTATCTGATTGGGAACATCACATAAC-GACGT 3863 Query 22068 TTG-ATTCAACTAAAAGTGGTTC 22089 ||| |||||| || | |||||| Sbjct 3862 TTGTTTTCAACCAATAATGGTTC 3840 >seq3673 Length=32929 Score = 159 bits (176), Expect = 4e-34 Identities = 305/445 (69%), Gaps = 6/445 (1%) Strand=Plus/Plus Query 21185 TTTTGATAATCACTAACTCTTTTTTCGAAAAAATTTGTCTTTCCTTCCAATGATATAGAT 21244 |||||||||||| ||||| ||||| || ||||| || || || |||| || ||| | Sbjct 10337 TTTTGATAATCAGAGACTCTCTTTTCAAAGAAATTAGTTTTACCAGCCAAGGAAATATTT 10396 Query 21245 TCCATAAAATCAAATGGATT-TTCAGATTTAAATATTTTATTACAACCCAGTTCTGATAA 21303 ||||||||||||||||| || | | ||| | || ||| ||| || | || || Sbjct 10397 TCCATAAAATCAAATGGGTTGGTAACATTGTAGTACTTT-TTATTTCCAAAAGCTACTAG 10455 Query 21304 TAATCTATCTGCTACAAATTCTATATATTGACACATTAATTCACAATTCATACCGATCAA 21363 ||||||||| || |||||||| | ||| || ||||| || ||||||||||| || | || Sbjct 10456 TAATCTATCAGCAACAAATTCAACATACTGGCACATCAAGTCACAATTCATTCCCAATAA 10515 Query 21364 TTTTACAGGAAGAGCTTTTGTCAAAAAAGATTTTTCTATAGAGACGGCTTCAACAATTAT 21423 ||| ||||| || | | ||| | ||| || ||| || || || || || Sbjct 10516 GGATACTGGAAGCGCATCGCTGAAATATTCTTTCTCGATATCAACAGCCTCGGTGATGAT 10575 Query 21424 ATTTATTATCCTAGATGTACTAGGGGGATACAATAATTGTTTAAACATCAAACATGCAAA 21483 || || | || | ||| || ||| | | ||| | ||||| ||| | Sbjct 10576 TTTCTCAATTATTTCTGAAGAAGGTTTATTTTTTAAATATGAAAATAATAAACAGGCATA 10635 Query 21484 ATCACAATGCAAACCTTCATCCCTACTTATTAATTCATTAGAAAATGTTAAACCGGGCAT 21543 ||| || | ||||| || | || ||||||||||| |||||||| || || ||||| Sbjct 10636 ATCTGTGTGAATCCCTTCGTCTCGACAAATTAATTCATTGGAAAATGTCAACCCCGGCAT 10695 Query 21544 TAATCCTCTCTTTTTTAACCAAAATATTGACGCAAA--TGCTCCTGAAAAGAAAATGCCC 21601 || || | || |||||||| || |||| ||||| || |||||| || || || Sbjct 10696 CAAACCCCGTTTCTTTAACCAGAAAATTGCTGCAAACGAGCCACTGAAA--AATATACCT 10753 Query 21602 TCAACGGCAGCAAATGCAACTAATC 21626 ||||| |||||||||||||| |||| Sbjct 10754 TCAACAGCAGCAAATGCAACCAATC 10778 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531869750290800