Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Naumovozyma_20dairenensis_20[genbank_20GCA_5F001074275.1_202015-07- 10] 4,670 sequences; 13,985,759 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq3873 118 3e-21 seq3673 116 1e-20 seq350 87.8 5e-12 >seq3873 Length=5428 Score = 118 bits (130), Expect = 3e-21 Identities = 432/667 (65%), Gaps = 11/667 (2%) Strand=Plus/Minus Query 363561 GCCAACAATGTACAATGCTGGAACTCGTAATCCAC-AGATGTCTTCTTGCTTTCTTCTAA 363619 ||| ||| |||| |||||||| | | | | || || | | || || || || || || Sbjct 1053 GCCCACATTGTATAATGCTGGTAGT-GAATTCAACTATTTATCATCATGTTTCCTAGTAG 995 Query 363620 AAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAA-GAATTGTGCTCTTATT 363678 ||||| || ||||| || || || || || | || ||||| ||| | ||||| ||| Sbjct 994 CCATGAAAGATGATTCGATAGATGGGATATTCAAGACTCTTAATGAAGCG-GCTCTAATT 936 Query 363679 TCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGCACAGAACAGTTAC 363738 ||||| | |||| ||||| ||| | | ||||| || | | | | || Sbjct 935 TCCAAAGCTTCAGGAGGAATAGGTATTCATGTGCACAACATTAGATCCAATGGCTCGTAT 876 Query 363739 ATTCGCGGCAC-AGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAA 363797 ||| | |||| | |||| | || || ||| |||| |||||| | ||||| | |||| Sbjct 875 ATTGCCAGCACCAATGGGA-ATTCAAACGGGTTGGTACCCATGTTGCGTGTTTACAACAA 817 Query 363798 TACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCT 363857 |||||| ||||| ||||| || ||||| || ||||| ||| || ||||| || ||| | Sbjct 816 TACTGCAAGGTATGTCGATCAAGGTGGGGGTAAGCGTCCAGGAGCATTTGCCATATATAT 757 Query 363858 CGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGA 363917 ||||| |||| ||||| ||||| || | || | | ||||| ||||| || Sbjct 756 AGAGCCATGGCATGGTGATATATTTGATATTTTAGAAATGAGAAAAAATCATGGAAACGA 697 Query 363918 GGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCG 363977 ||| || | | | ||| |||| |||| | | ||| | ||||| ||||||||||| Sbjct 696 AGAAATGAGAACTAGAGATTTGTTTTATGGATTATGGATACCTGACTTATTTATGAAGCG 637 Query 363978 CGTGGAGGCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGA 364037 ||| | | | | | ||| | | |||| ||| | ||| | || || || Sbjct 636 TGTGAAAGAAAATTCTGACTGGACTTTGTTTTCACCAAATGAAGCTGTTGGCCTAAGTGA 577 Query 364038 TGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCG 364097 ||| | || || || | || ||||| || |||||||| ||| | | | Sbjct 576 TGTTTACGGCGAGGAATTTGAAAAATTATACTGCAAATATGAATC----AGAAGGTTTTG 521 Query 364098 TAAGACA-ATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAG 364156 || | | || || || || ||||| | ||||| || |||| || | || |||| Sbjct 520 GAACAAAGGTTAGTGCTCACAAATTATGGCTAGCCATTTTGCATTCTCAAACAGAAACAG 461 Query 364157 GAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTG 364216 | ||||| ||||| |||||||| | || ||| || |||||||| | | ||| Sbjct 460 GTGGCCCCTACATGTTATACAAAGACGCCTGTAACACAAAATCCAACCAAAAAAATATTG 401 Query 364217 GTACAAT 364223 ||||||| Sbjct 400 GTACAAT 394 >seq3673 Length=32929 Score = 116 bits (128), Expect = 1e-20 Identities = 307/462 (66%), Gaps = 19/462 (4%) Strand=Plus/Minus Query 22499 TTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCAATCTTTTGGC 22558 |||||||||||| |||||||| || || || ||| | ||| ||||| || ||| Sbjct 10772 TTGCATTTGCTGCTGTTGAAGGTATATTTTTCAGTGGCTCGTTTGCAGCAATTTTCTGGT 10713 Query 22559 TaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATTAGCCGAGATG 22618 |||| ||||| | | |||||||| | || ||||| ||||| |||||| | ||||| | Sbjct 10712 TAAAGAAACGGGGTTTGATGCCGGGGTTGACATTTTCCAATGAATTAATTTGTCGAGACG 10653 Query 22619 AGGGTCTTCATACCGATTTTGCGTGTATGCTATATCGGAATCATA--TCATTCATAAACT 22676 | || |||| || |||| ||| ||| | ||| | ||||| | | |||||| Sbjct 10652 AAGGGATTCACACAGATTATGCCTGTTTATTATTT-----TCATATTTAAAAAATAAACC 10598 Query 22677 TCCATATGAAACTGTACTTG---ATATTATTACAAATGCAGTTG--AACTTGAACGTCTA 22731 | | | |||| || ||| | || || || | || |||| | | ||| | || Sbjct 10597 TTCTTCAGAAA---TAATTGAGAAAATCATCACCGAGGCTGTTGATATCGAGAAAGAATA 10541 Query 22732 TTTATTTGCGAGGCGTTACCAGTAAGTCTCATT-GGTATCAATGCCGAATCAATGAGTAC 22790 || | |||| ||| | ||||| | || ||| || || ||| || | ||| | Sbjct 10540 TT--TCAGCGATGCGCTTCCAGT-ATCCTTATTGGGAATGAATTGTGACTTGATGTGCCA 10484 Query 22791 ATATATTAAATTTGTTGCAGATCGTCTATTAATTTCACTCGGTTATGCAAAGCATTATAA 22850 ||| || |||||||||| ||| | || || | | | || || |||| | || || Sbjct 10483 GTATGTTGAATTTGTTGCTGATAGATTACTAGTAGCTTTTGGAAATAAAAAGTACTACAA 10424 Query 22851 CGTCGTTAATCCATTTGAATGGATGGAACTTATTTCACTTGAAGGAAAGACCAATTTCTT 22910 || || |||||||| | |||||| |||||| | | || || || |||||||| Sbjct 10423 TGTTACCAACCCATTTGATTTTATGGAAAATATTTCCTTGGCTGGTAAAACTAATTTCTT 10364 Query 22911 CGAAAAAAGAGTTGGTGAATACCAAAAAGCAGGTGTTATGGA 22952 ||||| ||||| ||| || ||||| || ||||| ||||| Sbjct 10363 TGAAAAGAGAGTCTCTGATTATCAAAAGGCTGGTGTGATGGA 10322 >seq350 Length=9345 Score = 87.8 bits (96), Expect = 5e-12 Identities = 115/154 (75%), Gaps = 4/154 (3%) Strand=Plus/Minus Query 131384 CAAGAGTTCTTATTATCGATGAAGTTTCTATGCTTGATGGAGAATTATTTAATAAACTTG 131443 |||| ||| | || || |||||| |||| ||| |||||||| | || || ||||| ||| Sbjct 6424 CAAGGGTTTTGATAATTGATGAAATTTCCATGGTTGATGGACATTTGTTAAATAAG-TTG 6366 Query 131444 AAA-AAATCGCACAGAGTATTCGATCAAATTCTAGACCATTTGGTGGAATTCAACTAAT- 131501 || |||| || ||| | | || |||| | ||||||| ||||||||||||||| | Sbjct 6365 AATGAAATTGCCAAGAATCTCAGACGAAATAATCGACCATTCGGTGGAATTCAACTAGTA 6306 Query 131502 TCTCGTTGGAGACTTTTATCAGCTACCACCTGTC 131535 || | ||| || |||||||| ||||||| ||| Sbjct 6305 GCTTG-TGGTGATTTTTATCAATTACCACCGGTC 6273 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303275614651940