Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Naumovozyma_20dairenensis_20[genbank_20GCA_5F001074275.1_202015-07- 10] 4,670 sequences; 13,985,759 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq3873 89.7 6e-13 seq3780 86.0 8e-12 >seq3873 Length=5428 Score = 89.7 bits (98), Expect = 6e-13 Identities = 291/450 (65%), Gaps = 8/450 (2%) Strand=Plus/Plus Query 116152 GCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCG 116211 || || || || || || || || || ||||| || || ||| | || |||||| Sbjct 28 GCTTCAAGTGCAGCATGGTATATAGTTTCAAATATTTGAATATTTAATGTTTTGGCCATT 87 Query 116212 TCGGAATCAAACGCGAGACGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGG 116271 |||||||||| | | || | ||||| || || | |||||| ||||| | Sbjct 88 GCGGAATCAAATGGTAACCGAAGTTCAGCAAATAGGTCTGCCAAACCTTGTACACCTAAA 147 Query 116272 CCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACGGGATAAAAATTCCTA 116331 ||||||| || ||||| |||| || | | || || || ||||| || | | Sbjct 148 GCAATTGGACGGTGTCTTTTATTTGAGTATTCTGCTGTTTCAACGGGGTATTTTGTTACA 207 Query 116332 TCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAA 116391 || ||||| ||||| | |||| | || | || || |||| || | ||||| || Sbjct 208 TCAATAACTCTATTCAAATTTCTTGTCAACACTTTGGTGACAGAGTGCAATTTTTCAAAA 267 Query 116392 TCAAAACTGCGAGTCTCTTCA------TTGACATACTTAGGAAGGGCGATTGACGCCAGA 116445 ||||| | ||| ||||| || | |||| | || | || | || |||| | Sbjct 268 TCAAATCCAATAGTATCTTCTGTTGTTTTCAAATACGTCGGTAATGCAAGGGATGCCAAA 327 Query 116446 TTACACACAGAGGTCTCATCCTTATCA-GTGTACTCTATAATTTCCGTACACAAATTTGA 116504 ||||| |||| ||| || | | | | | || || | ||| || |||||||||||| Sbjct 328 TTACAGACAGCGGTTTCTTT-TGGTGACGAATATTCAACAATCTCACAACACAAATTTGA 386 Query 116505 ACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAGAG 116564 | ||| || || || | || ||||| || || ||||||||||| || || ||||| | Sbjct 387 AGACTTTATTGTACCAATATTTTTTTGGTTGGATTTTGTGTTACAGGCGTCTTTGTATAA 446 Query 116565 CATATATGGCGTCCCCGTCTCCGTTTGGGA 116594 ||| || || || || || ||||| || Sbjct 447 CATGTAGGGGCCACCTGTTTCTGTTTGAGA 476 >seq3780 Length=17529 Score = 86.0 bits (94), Expect = 8e-12 Identities = 143/204 (70%), Gaps = 7/204 (3%) Strand=Plus/Plus Query 12787 TATCGAAGCCATCCATCTCAGTCAAGAGTTGATTGATGGTTTGTTCACGTTCATCATTCG 12846 |||| || || ||||| || ||| | |||||| | ||| ||||||||||||||| | Sbjct 12966 TATCAAACCCGTCCATTTCTACCAACAATTGATTCAATGTTGTTTCACGTTCATCATTGG 13025 Query 12847 ---CGG--GCATACCACCCGCACTGCGTTGCTTACCGACGGCGTCAATTTCGTCAATGAA 12901 ||| |||| || | | | ||||| ||||| | || |||||||| |||| || Sbjct 13026 CACCGGTAGCATTCCCCTTGGA--ACGTTGTTTACCAATAGCATCAATTTCATCAACAAA 13083 Query 12902 AACGATACACGGTTGATTTTCACGGGCAACTTCAAAGATATCTCGCACTCTCTTGGCACC 12961 || || | || |||||| || ||| || ||| | ||| || ||||| ||||| Sbjct 13084 CACAATTGAAGGGGCATTTTCTCGTGCAGTTTTAAACAAATCACGAACTCTAGACGCACC 13143 Query 12962 GACACCCACAAACATCTCCACAAA 12985 ||||| |||||||| || ||||| Sbjct 13144 AACACCAACAAACATTTCAACAAA 13167 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613471386517200