Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Naumovozyma_20dairenensis_20[genbank_20GCA_5F001074275.1_202015-07- 10] 4,670 sequences; 13,985,759 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq3929 197 2e-45 seq3780 96.9 4e-15 seq4378 93.3 5e-14 >seq3929 Length=34605 Score = 197 bits (218), Expect = 2e-45 Identities = 849/1321 (64%), Gaps = 37/1321 (3%) Strand=Plus/Plus Query 105896 TTGACAATCACAAACTCTCCCGCGAGGGTTCTTCTCAGA-TAGATGTTCGTCGTGTAGGG 105954 |||||||| || ||||| || | |||||| ||| || ||||| | ||||| || Sbjct 20171 TTGACAATTTGGAATTCTCCAGCTAATACTCTTCT-AGAGTAAATGTTAGAAGTGTATGG 20229 Query 105955 TTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCAT 106014 |||||| |||||||| |||||||| ||||||| ||||| || || ||||||||||| | Sbjct 20230 TTCAAAACATTCATTGTTACCCAAAATTTGTGATGTGGAAGCAGTAGGCATTGGTGCAAC 20289 Query 106015 CAAAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTCCTTGAGAACATCCCAGTCG-- 106072 ||| | ||| | | ||| | || | || || | |||||| || Sbjct 20290 CAACAAGGAGTTTCTCATACCATGTTTGGCCAAATCTTGTTTTAATGTATCCCAATCCCA 20349 Query 106073 TAGTTGAGCTTGGTTTCACCTTCCCACATATCAAATTGAAGCACCCCTTGGGACGTGGGA 106132 || || || ||||||| |||| ||| ||||||||| | | ||||| || | ||| Sbjct 20350 TAATTCAG-TTGGTTTTCTGTTCC-ACAAATCAAATTGTAATAAACCTTGAGAGGCTGGA 20407 Query 106133 GAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTCCAGG 106192 ||||| | | || || |||| ||||| ||| |||||||||| || || | Sbjct 20408 GAACCTGGATAGGTTTCGTAGGCACCTTCTTCTTTAGCCAATTCAATTGAAGCTTCAACA 20467 Query 106193 GATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATCA 106252 | || || || || || ||||| || || |||| || | ||||| | || ||| Sbjct 20468 GCAGCATGGTAGATAGTCTCAAAAATTTGAATGTTCAATTCTCTAGCTTCTTGAGAGTCA 20527 Query 106253 AATGCGTAGCGGCACAAA---ATAAATACATCCGCGAGACCTTGAACACCCAAACCAATA 106309 |||| ||| | ||| ||||| |||| || | |||||||||||||||| |||| Sbjct 20528 AATG-GTAAT--CTCAATTCCATAAAGGCATCAGCCAAACCTTGAACACCCAAAGCAATT 20584 Query 106310 GGTCTGTGTCGCATATTAGA-CTTTCGCGCAGTCTCA-ACGGGATAAAAATTTCTGTCAA 106367 |||||||||| ||| || || ||||| || ||| || || ||| || | ||||| Sbjct 20585 GGTCTGTGTCTCATGTTTGATCTTTCA-GCT-TCTGGGACTGGGTAATGGTTACGGTCAA 20642 Query 106368 TGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCAA 106427 | |||| ||| | || ||| |||| ||| |||| | ||| | ||| ||| | | Sbjct 20643 TAACTCTGTTCAAGTTACGGGTGACAACCTTAGTGACCTGATGTAATTTGTCAAAGTTGT 20702 Query 106428 A---AGTGCGAGTCTCTTCATTG---ACATACTTTGGAAGGGCGATTGATGCCAAATTGC 106481 | ||| | | || ||||| ||| | ||| | ||| || || ||||| || | Sbjct 20703 ACCAAGTACTTTTTTCATCATTTTCAACAAATGATGGCAAGGCAATGGAAGCCAAGTTAC 20762 Query 106482 AAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAACTCT 106541 ||||||| ||||| | | | || || | |||||| ||||||||||||| | Sbjct 20763 AAACAGCAACTTCATCTGGAGCAGAATATTCAACAATTTCACAACACAAGTTGGAAGATT 20822 Query 106542 TAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGT 106601 | || | ||||| ||||||||||| || ||||| || | ||| || || | ||| Sbjct 20823 TGATAATACCCAAGTTCTTTTGGTTGGATTTGTTGTTACATGAATCTTTATATAACATAA 20882 Query 106602 AGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACACATCGGCGGC--TGG 106659 | || || || || || || || | | ||| || | ||||| | || || Sbjct 20883 ATGGGGTACCTGTTTCAGTTTGGGCTCCCAAAATAGCATACCACAATTTTTGAGCTTTGA 20942 Query 106660 TACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTC 106719 | || | | | || || ||||| || ||||| | |||| || || || Sbjct 20943 TGGTCTGTC--TACCACGGTTTTCTTTTTCGTATTTGGTGTATAATTCTTCGAATTCGTC 21000 Query 106720 ACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACC 106779 ||| | || | | ||||| |||| | ||| |||| | || ||| | |||| Sbjct 21001 ACCATAAACATCAGCCAAGCCTGGGGCCTCATTTGGTGAGAATAAAGTCCAGTCACCATT 21060 Query 106780 CTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCT-AC 106838 | ||||| | |||||||| | ||||||||||||| | || || | |||||| | Sbjct 21061 TTGTTCAACTCTTTTCATGAACAAATCTGGAATCCACAAAGCTGGGAACAAATCTCTGGC 21120 Query 106839 ACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGT 106898 | || ||||| | ||| || || || | |||| ||| || | || || || Sbjct 21121 TCTGA-TTTCTTCTTTACCGTGATTCTTTCTAATATCAATGAAATCAAAAATGTCACTGT 21179 Query 106899 GCCATGGCTCAAGATAGACTGCGA------TAGATCCCTTTCGACGCCCAGCTTGATTTA 106952 ||||||| || | || | || | || || ||| | ||| |||| | | Sbjct 21180 GCCATGGTTCTAAGTACAAGGCAAAGGCACCAGGTCTCTTGTTA---CCACCTTGGTCGA 21236 Query 106953 CATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCAT 107012 |||| || || ||| || ||||| | | ||||||||||||||||| || ||||| Sbjct 21237 CATAACGTGCAGTGTTATTGAATACTCTTACCATTGGAATAATACCATTAGAAGTACCAT 21296 Query 107013 TTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCC 107072 | || || ||| || | | | | | |||||||| | || || || | Sbjct 21297 TGGTACCAGCAATGTAAGCACCGGTAGAACGAATGTTGTGGATGTGTAAACCGATTCCTC 21356 Query 107073 CAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGT 107132 |||| | |||||||| |||||| | | ||| | || ||||| | || || | Sbjct 21357 CAGCACTTTTTGAGATCAAAGCACACGATTTCAAAGTGTCGTAAATACCTTCAATAGAAT 21416 Query 107133 CCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGA 107192 | ||||| | || | | ||| || |||||| || ||||||||||||||||| || | Sbjct 21417 CATCCTTCATAGCAAGCAAGAAACATGAGGACATTTGTGGTCTTGGTGTACCAGCGTTAA 21476 Query 107193 A 107193 | Sbjct 21477 A 21477 >seq3780 Length=17529 Score = 96.9 bits (106), Expect = 4e-15 Identities = 195/286 (68%), Gaps = 9/286 (3%) Strand=Plus/Plus Query 9277 TATCAAAACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCG 9336 ||||||| || ||||| ||| ||| | ||| || | ||| ||| ||||||||||| | Sbjct 12966 TATCAAACCCGTCCATTTCTACCAACAATTGATTCAATGTTGTTTCACGTTCATCATTGG 13025 Query 9337 C-----TGGCATACCACCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAA 9391 | | |||| || | | | ||||| || || | |||||||| ||||||| || Sbjct 13026 CACCGGTAGCATTCCCCTTGGAA--CGTTGTTTACCAATAGCATCAATTTCATCAACAAA 13083 Query 9392 GACAATACATGGTTGATTTTCGCGGGCGATTTCAAAGAGATCGCGAACCCTTTTGGCGCC 9451 ||||| | || |||||| || || ||| ||| | ||| ||||| || || || Sbjct 13084 CACAATTGAAGGGGCATTTTCTCGTGCAGTTTTAAACAAATCACGAACTCTAGACGCACC 13143 Query 9452 CACACCAACAAACATCTCCACAAAGTTTGCGGCGGAACATTGGAT-GAAGGGGACATTAG 9510 |||||||||||||| || ||||| | || ||||| | | || || || || | Sbjct 13144 AACACCAACAAACATTTCAACAAATTCTGAACCGGAA-ACAGAATAAAACGGAACCCCTG 13202 Query 9511 ATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGG 9556 |||||| ||| | || ||| || | || ||||| |||||||| Sbjct 13203 CTTCACCAGCAGTTGCCTTGGCAAGTAACGTTTTACCAGTACCTGG 13248 >seq4378 Length=39572 Score = 93.3 bits (102), Expect = 5e-14 Identities = 116/159 (73%), Gaps = 0/159 (0%) Strand=Plus/Plus Query 155044 TATGGTCGTGTTGCACCACGATCCGGTCTCGCTGTGAAGCATGGTATTCAAGTTGGTGCG 155103 |||||||||||||| ||||| || || | || ||||| ||||||||| | |||||| Sbjct 26554 TATGGTCGTGTTGCCCCACGTTCGGGATTGGCCGTGAAACATGGTATTTCAACTGGTGCT 26613 Query 155104 GGTGTTATTGATCCCGACTATACAGGTGAAGTCAAAGTCGTTCTCTTCAATCACGGAGAC 155163 ||||| |||||| | || ||| |||||||| ||||| || | || || || | || Sbjct 26614 GGTGTCATTGATGCTGATTATCGTGGTGAAGTGAAAGTAGTCTTATTTAACCATAGTGAA 26673 Query 155164 AAAGACTTTGAGGTAAAGAAAGGGGATCGCATCGCACAA 155202 ||||| || || | || |||| ||| | || || ||| Sbjct 26674 AAAGATTTCGAAATTAAAGAAGGTGATAGAATTGCTCAA 26712 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589946359870800