Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Naumovozyma_20dairenensis_20[genbank_20GCA_5F001074275.1_202015-07- 10] 4,670 sequences; 13,985,759 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq3929 210 1e-49 seq3873 187 1e-42 >seq3929 Length=34605 Score = 210 bits (232), Expect = 1e-49 Identities = 305/426 (72%), Gaps = 6/426 (1%) Strand=Plus/Plus Query 25888 ATTTGGACAGAATAAATGCCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGG 25947 |||||| |||||||| ||| ||| ||||||| |||||| | | ||| || |||||||| Sbjct 21031 ATTTGGTGAGAATAAAGTCCAGTCACCATTTTGTTCAACTCTTTTCATGAACAAATCTGG 21090 Query 25948 AATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTT 26007 |||||||| || || |||||||| ||||| ||||||||||| |||||||||||| | Sbjct 21091 AATCCACAAAGCTGGGAACAAATCTCTGGCTCTGATTTCTTCTTTACCGTGATTCTTTCT 21150 Query 26008 TAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACC 26067 | ||| | |||||||||||| || ||||||||||||||| || | ||||| ||| Sbjct 21151 AATATCAATGAAATCAAAAATGTCACTGTGCCATGGTTCTAAGTACAAGGCAAAGGCACC 21210 Query 26068 TTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACAT 26127 ||| || |||||||| || || || | |||||| | |||||| ||| | | ||| Sbjct 21211 AGGTCTCTTGTTACCACCTTGGTCGACATAACGTGCAGTGTTATTGAATACTCTTACCAT 21270 Query 26128 TGGAACTAAT-CCAGTTGAAAATCCGTTTGTGCTATGAATCTTGGATCCTGTCGATCTAA 26186 ||||| |||| ||| | ||| || || || | | ||| | | || || || | || Sbjct 21271 TGGAA-TAATACCATTAGAAGTACCATTGGTACCAGCAATGTAAGCACCGGTAGAACGAA 21329 Query 26187 TATCGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAATAGCTGCACA--ATCTGA 26244 | | ||| || | ||||||||| ||||| | |||||| || ||||| || | | Sbjct 21330 TGTTGTGGATGTGTAAACCGATTCCTCCAGCACTTTTTGAGATCAAAGCACACGATTTCA 21389 Query 26245 AACTGTATCGAAAATTCCTTTTATGCTATCACCTTTCATTCCTAATAAAAAACAAGAAGA 26304 || || ||| |||| |||| || |||| | ||||| | | || ||||| || || Sbjct 21390 AA--GTGTCGTAAATACCTTCAATAGAATCATCCTTCATAGCAAGCAAGAAACATGAGGA 21447 Query 26305 TAATTG 26310 | ||| Sbjct 21448 CATTTG 21453 Score = 120 bits (132), Expect = 2e-22 Identities = 125/164 (76%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 25016 AATTCTCCAGACAAAACTCTTCTTATTGATAAGTTTGAAGTGAATGGTTCAAAACATTCA 25075 |||||||||| || |||||||| | | ||| |||||| ||||||||||||||||| Sbjct 20183 AATTCTCCAGCTAATACTCTTCTAGAGTAAATGTTAGAAGTGTATGGTTCAAAACATTCA 20242 Query 25076 TTATTTCCTAAGATTTGAGAAGTAGATGCTGTTGGCATTAATGCTATTAATAGCGAATTT 25135 || || || || ||||| || || || || || |||||| ||| | || | || ||| Sbjct 20243 TTGTTACCCAAAATTTGTGATGTGGAAGCAGTAGGCATTGGTGCAACCAACAAGGAGTTT 20302 Query 25136 CTCAAACCATATTTAACAATCTCTTGTTTTAATTTATCCCAATC 25179 |||| ||||| ||| | | |||||||||||| |||||||||| Sbjct 20303 CTCATACCATGTTTGGCCAAATCTTGTTTTAATGTATCCCAATC 20346 >seq3873 Length=5428 Score = 187 bits (206), Expect = 1e-42 Identities = 296/423 (70%), Gaps = 6/423 (1%) Strand=Plus/Plus Query 25888 ATTTGGACAGAATAAATGCCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGG 25947 |||||| | || ||| ||| |||| ||||| | || || ||||||||| || || Sbjct 597 ATTTGGTGAAAACAAAGTCCAGTCAGAATTTTCTTTCACACGCTTCATAAATAAGTCAGG 656 Query 25948 AATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTT 26007 ||||| | | ||||||| |||||||| | |||||||||||| ||||| ||||| ||| | Sbjct 657 TATCCATAATCCATAAAACAAATCTCTAGTTCTCATTTCTTCGTTTCCATGATTTTTTCT 716 Query 26008 TAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACC 26067 | ||||| | |||||| ||||| |||||||| |||| ||| || ||||| || Sbjct 717 CATTTCTAAAATATCAAATATATCACCATGCCATGGCTCTATATATATGGCAAATGCTCC 776 Query 26068 TTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACAT 26127 | | || || ||||||||||| || || |||||||| | ||| |||| |||||| Sbjct 777 TGGACGCTTACCCCCACCTTGATCGACATACCTTGCAGTATTGTTGTAAACACGCAACAT 836 Query 26128 TGGAACTAATCCAGTTGAAAATCCGTTTGTGCTATGAATCTTGGATCCTGTCGATCTAAT 26187 || || || || ||||| || || ||||| ||| | || || | |||||||| Sbjct 837 GGGTACCAACCCGTTTGAATTCCCATTGGTGCTGGCAATATACGAGCCATTGGATCTAAT 896 Query 26188 ATCGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAAT---AGCTGCACAATCTGA 26244 | ||| |||||||||| ||||| || | ||| ||||| ||| || || Sbjct 897 GTTGTGCACATGAATACCTATTCCTCCTGAAGCTTTGGAAATTAGAGCCGC---TTCATT 953 Query 26245 AACTGTATCGAAAATTCCTTTTATGCTATCACCTTTCATTCCTAATAAAAAACAAGAAGA 26304 || || | ||| || || | ||| |||| ||||||| ||| || ||||| || || Sbjct 954 AAGAGTCTTGAATATCCCATCTATCGAATCATCTTTCATGGCTACTAGGAAACATGATGA 1013 Query 26305 TAA 26307 ||| Sbjct 1014 TAA 1016 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253025598070250