Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Naumovozyma_20dairenensis_20[genbank_20GCA_5F001074275.1_202015-07- 10] 4,670 sequences; 13,985,759 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq3714 212 1e-49 seq3673 158 2e-33 seq4086 102 2e-16 seq3454 87.8 4e-12 seq3068 86.0 1e-11 >seq3714 Length=15575 Score = 212 bits (234), Expect = 1e-49 Identities = 431/647 (67%), Gaps = 3/647 (0%) Strand=Plus/Minus Query 49647 AATAATCTATCGGCTACAAATTCAACATATTGTGACATTAATTCACAATTCATACCCAAT 49706 || |||||||| || || ||||||| ||||| |||| || | ||| ||||||||||| Sbjct 4630 AACAATCTATCAGCGACGAATTCAATGTATTGACACATCAAGTTACAGTTCATACCCAAC 4571 Query 49707 AATTTAAATGGTAATGCATCATCAATAAATTCtttttctatttctacagcttgtttaatt 49766 ||| | ||| | |||||| || |||||||||| | || ||||||| |||| Sbjct 4570 AATGACACTGGAAGAGCATCAGTAAAGTATTCTTTTTCAACATCAACAGCTTCAGTAATA 4511 Query 49767 atcataattatattattttttgataatttatatttaatatgattcgcatatattaaACAT 49826 || | | | | | | ||| | ||| | | |||| ||| ||| ||||| Sbjct 4510 ATTCTTTCAACAATCTCTGGAGATGGTCTATTCTGCAAATGA---GCAAATAACAAACAG 4454 Query 49827 GCAAAATCAGTATGTAAACCCTCGTCCCTAGATATAAATTCATTACTAAAAGTTAATCCT 49886 ||||| || || |||||||| || || ||| | || |||||||| ||||| || ||| Sbjct 4453 GCAAAGTCGGTGTGTAAACCTTCATCTCTACAAATCAATTCATTTGAGAAAGTCAAACCT 4394 Query 49887 GGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTACTAGAAAAGAATATA 49946 ||||| || ||||||||||| | ||| || || || ||||| || | ||||| ||| Sbjct 4393 GGCATCAAACCTCTCTTTTTCAACCAGAAAATAGAAGCAAATGAACCACTGAAGAAGATA 4334 Query 49947 CCCTCGACACACGCAAATGCTATTATTCTTGCTCCAAACATTAATTTATCATCTAATATC 50006 || || ||| ||||| |||| || |||| | ||| | | || ||||||| ||| Sbjct 4333 CCTTCAACAGCAGCAAAAGCTACTAATCTTTCACCATATAAGGCTTCATCATCTTGAATC 4274 Query 50007 CAATTTATAGCCCAATCTGCtttttttttGATAGAAGGTATATTTTCTATAGCTTTAAAT 50066 || || ||||||||||| ||||| |||| ||| | || ||||| | || || || || Sbjct 4273 CATTTGATAGCCCAATCAGCTTTCTTTTGAATACATGGAATATTAGCAATGGCATTGAAC 4214 Query 50067 AATTCAtttttttCATNNNNNNNNNNNNNNNNNNNNNNNATTAATAAAGAATACATTTCA 50126 || | || || | || ||||||||||| |||| Sbjct 4213 AAGTAATCAGCCTCTTGGGGATCTTTGATATATGTTTCAATCAATAAAGAATAGGTTTCT 4154 Query 50127 GAATGTACAGCTTCCATAGCTATTTGAAATGAATAAAATTGTCTTGCTTCTGAATACTGA 50186 ||||| | |||||| ||||| || ||| ||| | | ||||| | | ||| Sbjct 4153 GAATGAATGTTTTCCATCATGATTTGGAAACCATAGAATGATTTGGCTTCAGGAAGTTGA 4094 Query 50187 ACTTCGGAAAAGAATCGTTCAACTAAATTCTCAGATACAATACCATCAGATGCTGCGAAG 50246 ||||| | |||| ||||| |||||| ||| ||||||||||| || || || || Sbjct 4093 ACTTCAGTTGAGAAATTTTCAATTAAATTTTCACCAACAATACCATCGGAAGCGGCAAAA 4034 Query 50247 AATGCTAAAACGTATTTAATAAAATGTTTTTCATTATCTTTTAAATT 50293 ||||| || || |||||||| | ||||||| || ||||| || Sbjct 4033 AATGCCAATACTCTAGAAATAAAATATCTTTCATTTTCATTTAATTT 3987 >seq3673 Length=32929 Score = 158 bits (174), Expect = 2e-33 Identities = 442/675 (65%), Gaps = 21/675 (3%) Strand=Plus/Plus Query 49592 CATAAAATCAAATGGATTTTTGGTATTATAATATTTTTCTCCTATCAATACATA-TAATA 49650 ||||||||||||||| || | ||| || || |||| | | ||| | || || || Sbjct 10399 CATAAAATCAAATGGGTTGGTAACATTGTAGTACTTTT-TATTTCCAAAAGCTACTAGTA 10457 Query 49651 ATCTATCGGCTACAAATTCAACATATTGTGACATTAATTCACAATTCATACCCAATAATT 49710 ||||||| || |||||||||||||| || |||| || ||||||||||| |||||||| Sbjct 10458 ATCTATCAGCAACAAATTCAACATACTGGCACATCAAGTCACAATTCATTCCCAATAAGG 10517 Query 49711 TAAATGGTAATGCATCATCAATAAATTCtttttctatttctacagcttgtttaattatca 49770 | ||| | ||||| | | ||||||| || || || ||||| | | || || Sbjct 10518 ATACTGGAAGCGCATCGCTGAAATATTCTTTCTCGATATCAACAGCCTCGGTGATGAT-- 10575 Query 49771 taattatattattttttgataa--tttatattt--aatatgattcgcatatattaaACAT 49826 | | ||||||| | | || ||||| ||| ||||||| | ||| |||||| Sbjct 10576 TTTCTCAATTATTTCTGAAGAAGGTTTATTTTTTAAATATGA-----AAATAATAAACAG 10630 Query 49827 GCAAAATCAGTATGTAAACCCTCGTCCCTAGATATAAATTCATTACTAAAAGTTAATCCT 49886 ||| |||| || || | || ||||| | | | || |||||||| ||| || || || Sbjct 10631 GCATAATCTGTGTGAATCCCTTCGTCTCGACAAATTAATTCATTGGAAAATGTCAACCCC 10690 Query 49887 GGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAA---AACTACTAGAAAAGAAT 49943 ||||| || || | || || | ||| || |||| ||||| | | ||| |||| ||| Sbjct 10691 GGCATCAAACCCCGTTTCTTTAACCAGAAAATTGCTGCAAACGAGCCACT-GAAA--AAT 10747 Query 49944 ATACCCTCGACACACGCAAATGCTATTATTCTTGCTCCAAACATTAATTTATC-ATCTAA 50002 ||||| || ||| |||||||| | | ||| | || ||| | || ||| Sbjct 10748 ATACCTTCAACAGCAGCAAATGCAACCAATCTCTCAGCATACAAAGCATCCTCGCTCT-G 10806 Query 50003 TATCCAATTTATAGCCCAATCTGCtttttttttGATAGAAGGTATATTTTCTATAGCTTT 50062 ||||| | || |||||||| ||||||||| | ||| | || ||||| || ||||| || Sbjct 10807 GATCCATCTGATTGCCCAATCGGCTTTTTTTCTTATAAATGGGATATTGTCAATAGCATT 10866 Query 50063 AAATAATTCAtttttttCATNNNNNNNNNNNNNNNNNNNNNNNATTAATAAAGAATACAT 50122 ||| || | | ||| | ||||| || ||||| | Sbjct 10867 AAACAAAAAGTCTGCTTCTTCGGGGTCTTTGAAATATGTTTCTATTAACAACGAATAAGT 10926 Query 50123 TTCAGAATGTACAGCTTCCATAGCTATTTGAAATGAATAAAATTGTCTTGCTTCTGAATA 50182 || ||||| | |||||| || ||||| |||| || | || || | Sbjct 10927 CTCTGAATGAATGTTTTCCATCATGATCTGAAACTTGTAAACCAGTTTAGCCTCGGGTAT 10986 Query 50183 CTGAACTTCGGAAAAGAATCGTTCAACTAAATTCTCAGATACAATACCATCAGATGCTGC 50242 || ||||| | | |||| ||| || || |||||| ||||||||||| ||||| || Sbjct 10987 TTGCACTTCTGCACAGAAATTTTCCACCAAGTTCTCATTAACAATACCATCCGATGCAGC 11046 Query 50243 GAAGAATGCTAAAAC 50257 |||||||| ||||| Sbjct 11047 AAAGAATGCCAAAAC 11061 >seq4086 Length=2763 Score = 102 bits (112), Expect = 2e-16 Identities = 101/131 (77%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 192409 AATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTT 192468 ||||| ||||| || ||||| || |||||||| ||||| ||||| ||| ||||| Sbjct 2761 AATCTTTGTTGGTCTGGTGGAATACCTTCTTTGTCTTGAATTTTGGATTTGACATTGTCA 2702 Query 192469 ATAGAATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAAT 192528 |||| || || ||||| ||||| | |||||||||||||||||||| ||||| | || Sbjct 2701 ATAGTGTCAGAAGATTCAACTTCCAAGGTAATGGTTTTACCAGTTAAGGTTTTGACGAAA 2642 Query 192529 ATCTGCATTTT 192539 || ||||| || Sbjct 2641 ATTTGCATCTT 2631 >seq3454 Length=12387 Score = 87.8 bits (96), Expect = 4e-12 Identities = 98/131 (75%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGA 192368 ||||||||| | | || || || || || |||| ||||| ||| || || ||||| Sbjct 12257 ACCACCTCTCAATCTCAAGACCAAGTGCAAGGTAGATTCTTTTTGGATGTTGTAGTCAGA 12316 Query 192369 TAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGG 192428 || |||| |||| || |||||||||||||| || || ||||| ||||| || ||||| Sbjct 12317 CAAGGTTCTACCATCTTCTAATTGTTTACCAGCGAAAATCAATCTTTGTTGGTCTGGTGG 12376 Query 192429 TATTCCTTCTT 192439 || ||||||| Sbjct 12377 AATACCTTCTT 12387 >seq3068 Length=8349 Score = 86.0 bits (94), Expect = 1e-11 Identities = 98/132 (74%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGA 192368 ||||||||| | | || || || || || || | || || ||| || || ||||| Sbjct 134 ACCACCTCTCAATCTCAAGACCAAGTGCAAGGTGGATTCCTTTTGGATGTTGTAGTCAGA 75 Query 192369 TAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGG 192428 || |||| | || |||||||||||||||||||| || ||||| ||||| || ||||| Sbjct 74 CAAAGTTCTACCGTCTTCCAATTGTTTACCAGCAAAAATCAATCTTTGTTGGTCTGGTGG 15 Query 192429 TATTCCTTCTTT 192440 || |||||||| Sbjct 14 AATACCTTCTTT 3 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 984421094254500