Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Naumovozyma_20dairenensis_20[genbank_20GCA_5F001074275.1_202015-07- 10] 4,670 sequences; 13,985,759 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq3714 210 4e-49 seq3673 183 5e-41 seq4086 114 2e-20 seq3068 95.1 2e-14 seq3454 84.2 4e-11 >seq3714 Length=15575 Score = 210 bits (232), Expect = 4e-49 Identities = 373/541 (69%), Gaps = 5/541 (1%) Strand=Plus/Minus Query 38831 TTTTTGGTATTCAGAAACttttttttCGAAAAAGTTTGTTTTTCCTTCTAATGATATTAA 38890 |||||| || || |||||| ||||||| || || || || || || | || || || Sbjct 4748 TTTTTGATAGTCTGAAACTCTTTTTTCAAAGAAATTGGTCTTACCGGCCAAGGAAATGTT 4689 Query 38891 ATTCATAAAATCAAATGGATTTTTGGTATTATAATATTTTTCTCCTATCAATA-CATATA 38949 | ||| ||||| |||||||| | ||| || || ||| | || | | | | | | Sbjct 4688 TTCCATGAAATCGAATGGATTAGTAACATTGTA-TACTTTCTTGTTACCTAAAGCCAACA 4630 Query 38950 ATAATCTATCGGCCACAAATTCAACATATTGTAACATTAATTCACAATTCATACCCAATA 39009 | |||||||| || || ||||||| ||||| |||| || | ||| ||||||||||| | Sbjct 4629 ACAATCTATCAGCGACGAATTCAATGTATTGACACATCAAGTTACAGTTCATACCCAACA 4570 Query 39010 ATTTAAATGGTAATGCATCATCAATAAATTCtttttctatttctacagcttgtttaatta 39069 || | ||| | |||||| || |||||||||| | || ||||||| |||| | Sbjct 4569 ATGACACTGGAAGAGCATCAGTAAAGTATTCTTTTTCAACATCAACAGCTTCAGTAATAA 4510 Query 39070 tcataattatattattttttgataatttatatttaatatgattcgcatataGTAAACATG 39129 | | | | | | | ||| | ||| | | |||| ||| ||| ||||| | Sbjct 4509 TTCTTTCAACAATCTCTGGAGATGGTCTATTCTGCAAATGA---GCAAATAACAAACAGG 4453 Query 39130 CAAAATCCGTATGTAAACCTTCGTCCCTAGATATAAATTCATTACTAAAAGTTAATCCTG 39189 |||| || || ||||||||||| || ||| | || |||||||| ||||| || |||| Sbjct 4452 CAAAGTCGGTGTGTAAACCTTCATCTCTACAAATCAATTCATTTGAGAAAGTCAAACCTG 4393 Query 39190 GCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTACTAGAAAAGAATATAC 39249 |||| || ||||||||||| | ||| || || || ||||| || | ||||| |||| Sbjct 4392 GCATCAAACCTCTCTTTTTCAACCAGAAAATAGAAGCAAATGAACCACTGAAGAAGATAC 4333 Query 39250 CCTCCACACACGCAAATGCTATTATTCTTGCTCCAAACATTAATTTATCATCTAAAATCC 39309 | || ||| ||||| |||| || |||| | ||| | | || ||||||| ||||| Sbjct 4332 CTTCAACAGCAGCAAAAGCTACTAATCTTTCACCATATAAGGCTTCATCATCTTGAATCC 4273 Query 39310 AATTTATGGCCCAATCTGCtttttttttGATAGAAGGTATATTTTCTATAGCTTTAAATA 39369 | || || |||||||| ||||| |||| ||| | || ||||| | || || || || | Sbjct 4272 ATTTGATAGCCCAATCAGCTTTCTTTTGAATACATGGAATATTAGCAATGGCATTGAACA 4213 Query 39370 A 39370 | Sbjct 4212 A 4212 >seq3673 Length=32929 Score = 183 bits (202), Expect = 5e-41 Identities = 376/548 (69%), Gaps = 21/548 (4%) Strand=Plus/Plus Query 38832 TTTTGGTATTCAGAAACttttttttCGAAAAAGTTTGTTTTTCCTTCTAATGATATTAAA 38891 ||||| || ||||| ||| | ||||| || || || ||||| || | || || || Sbjct 10337 TTTTGATAATCAGAGACTCTCTTTTCAAAGAAATTAGTTTTACCAGCCAAGGAAATATTT 10396 Query 38892 TTCATAAAATCAAATGGATTTTTGGTATTATAATATTTTTCTCCTATCAATACATA-TAA 38950 | ||||||||||||||| || | ||| || || |||| | | ||| | || || Sbjct 10397 TCCATAAAATCAAATGGGTTGGTAACATTGTAGTACTTTT-TATTTCCAAAAGCTACTAG 10455 Query 38951 TAATCTATCGGCCACAAATTCAACATATTGTAACATTAATTCACAATTCATACCCAATAA 39010 ||||||||| || |||||||||||||| || |||| || ||||||||||| |||||||| Sbjct 10456 TAATCTATCAGCAACAAATTCAACATACTGGCACATCAAGTCACAATTCATTCCCAATAA 10515 Query 39011 TTTAAATGGTAATGCATCATCAATAAATTCtttttctatttctacagcttgtttaattat 39070 | ||| | ||||| | | ||||||| || || || ||||| | | || || Sbjct 10516 GGATACTGGAAGCGCATCGCTGAAATATTCTTTCTCGATATCAACAGCCTCGGTGATGAT 10575 Query 39071 cataattatattattttttgataa--tttatattt--aatatgattcgcatataGTAAAC 39126 | | ||||||| | | || ||||| ||| ||||||| | ||| ||||| Sbjct 10576 --TTTCTCAATTATTTCTGAAGAAGGTTTATTTTTTAAATATGA-----AAATAATAAAC 10628 Query 39127 ATGCAAAATCCGTATGTAAACCTTCGTCCCTAGATATAAATTCATTACTAAAAGTTAATC 39186 | ||| |||| || || | |||||||| | | | || |||||||| ||| || || | Sbjct 10629 AGGCATAATCTGTGTGAATCCCTTCGTCTCGACAAATTAATTCATTGGAAAATGTCAACC 10688 Query 39187 CTGGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAA---AACTACTAGAAAAGA 39243 | ||||| || || | || || | ||| || |||| ||||| | | ||| |||| | Sbjct 10689 CCGGCATCAAACCCCGTTTCTTTAACCAGAAAATTGCTGCAAACGAGCCACT-GAAA--A 10745 Query 39244 ATATACCCTCCACACACGCAAATGCTATTATTCTTGCTCCAAACATTAATTTATC-ATCT 39302 ||||||| || ||| |||||||| | | ||| | || ||| | || ||| Sbjct 10746 ATATACCTTCAACAGCAGCAAATGCAACCAATCTCTCAGCATACAAAGCATCCTCGCTCT 10805 Query 39303 AAAATCCAATTTATGGCCCAATCTGCtttttttttGATAGAAGGTATATTTTCTATAGCT 39362 ||||| | || |||||||| ||||||||| | ||| | || ||||| || ||||| Sbjct 10806 -GGATCCATCTGATTGCCCAATCGGCTTTTTTTCTTATAAATGGGATATTGTCAATAGCA 10864 Query 39363 TTAAATAA 39370 ||||| || Sbjct 10865 TTAAACAA 10872 >seq4086 Length=2763 Score = 114 bits (126), Expect = 2e-20 Identities = 104/131 (79%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 171942 AATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTT 172001 ||||| |||||||| ||||| || |||||||| ||||| ||||| ||| ||||| Sbjct 2761 AATCTTTGTTGGTCTGGTGGAATACCTTCTTTGTCTTGAATTTTGGATTTGACATTGTCA 2702 Query 172002 ATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAAT 172061 ||||| || || ||||| ||||| | |||||||||||||||||||| ||||| | ||| Sbjct 2701 ATAGTGTCAGAAGATTCAACTTCCAAGGTAATGGTTTTACCAGTTAAGGTTTTGACGAAA 2642 Query 172062 ATCTGCATTTT 172072 || ||||| || Sbjct 2641 ATTTGCATCTT 2631 >seq3068 Length=8349 Score = 95.1 bits (104), Expect = 2e-14 Identities = 100/132 (76%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 171842 ACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGA 171901 ||||||||| | || || || || || || || | || || || || || || || Sbjct 134 ACCACCTCTCAATCTCAAGACCAAGTGCAAGGTGGATTCCTTTTGGATGTTGTAGTCAGA 75 Query 171902 TAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGG 171961 |||| || |||| ||||||||||||||||||||||| ||||| |||||||| ||||| Sbjct 74 CAAAGTTCTACCGTCTTCCAATTGTTTACCAGCAAAAATCAATCTTTGTTGGTCTGGTGG 15 Query 171962 TATTCCTTCTTT 171973 || |||||||| Sbjct 14 AATACCTTCTTT 3 >seq3454 Length=12387 Score = 84.2 bits (92), Expect = 4e-11 Identities = 97/131 (74%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 171842 ACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGA 171901 ||||||||| | || || || || || || |||| ||||| || || || || || Sbjct 12257 ACCACCTCTCAATCTCAAGACCAAGTGCAAGGTAGATTCTTTTTGGATGTTGTAGTCAGA 12316 Query 171902 TAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGG 171961 || | || | || || |||||||||||||| ||||| ||||| |||||||| ||||| Sbjct 12317 CAAGGTTCTACCATCTTCTAATTGTTTACCAGCGAAAATCAATCTTTGTTGGTCTGGTGG 12376 Query 171962 TATTCCTTCTT 171972 || ||||||| Sbjct 12377 AATACCTTCTT 12387 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 905083162686000