Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Naumovozyma_20dairenensis_20[genbank_20GCA_5F001074275.1_202015-07- 10] 4,670 sequences; 13,985,759 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq3714 167 7e-36 seq3929 141 3e-28 seq3543 114 4e-20 seq393 104 7e-17 seq3958 100 8e-16 seq3780 93.3 1e-13 seq4079 86.0 2e-11 seq3673 86.0 2e-11 >seq3714 Length=15575 Score = 167 bits (184), Expect = 7e-36 Identities = 324/467 (69%), Gaps = 15/467 (3%) Strand=Plus/Plus Query 133203 ATGAAAAACATTTTATTTCTATGATTTTAGCGTTTTTTGCTGCGAGTGATGGTATTGTTC 133262 |||||| | |||||||||||| | || || |||||||| || |||||||||||| Sbjct 4000 ATGAAAGATATTTTATTTCTAGAGTATTGGCATTTTTTGCCGCTTCCGATGGTATTGTTG 4059 Query 133263 TTGAAAATTTA--GGAACACGGTTTAT-GGGAGAAGTTCAACTGGCCGAAGCCCGTGCCT 133319 |||||||||| ||| | ||| | ||||||||||| | |||||| | | Sbjct 4060 GTGAAAATTTAATTGAAAA---TTTCTCAACTGAAGTTCAACTTCCTGAAGCCAAATCAT 4116 Query 133320 TTTATGGGCTACAGATTGCGATGGAAAATATCCATTCTATCACATATTCTACTCTAATTG 133379 | ||||| | || || ||||||||| || ||||| || |||||| | |||| Sbjct 4117 TCTATGGTTTCCAAATCATGATGGAAAACATTCATTCAGAAACCTATTCTTTATTGATTG 4176 Query 133380 ATACTTACATCAAAGATACCGTCCAGAAGC--ACAAACTATTCAACGCCATTAGCGAAT- 133436 | || || ||||||||| || | ||| || | | | ||||| |||||| || ||| Sbjct 4177 AAACATATATCAAAGATCCC--CAAGAGGCTGATTACTTGTTCAATGCCATT-GCTAATA 4233 Query 133437 TTCCTTGTATTAAAAAGAAATCTGACTGGGCTATTAAATGGATCCAGGACAAGCGTGCGA 133496 |||| |||||| |||||||| |||| |||||||| |||||||| || || | || Sbjct 4234 TTCCATGTATTCAAAAGAAAGCTGATTGGGCTATCAAATGGATTCAAGATGATGAAGCCT 4293 Query 133497 GTTTTGCTACTCGTCTCGTTGCTTTTGCTGTAGTAGAGGGCAtttttttCAGTGGTGCGT 133556 | || | | | || |||||||||| || || || || || ||||||||| | | Sbjct 4294 TATATGGTGAAAGATTAGTAGCTTTTGCTGCTGTTGAAGGTATCTTCTTCAGTGGTTCAT 4353 Query 133557 TCTGC-TCTATTTTTTGGCTTAAAAAGCGTGGTATTCTACCTGGACTGTGTTTTTCTAAC 133615 | ||| |||||||| ||| | |||||| | ||| | | || || || ||| || || Sbjct 4354 T-TGCTTCTATTTTCTGGTTGAAAAAGAGAGGTTTGATGCCAGGTTTGACTTTCTCAAAT 4412 Query 133616 GAACTTATTTCAAGGGACGAGGCACTTCACACCGAATTTGCC-GTTT 133661 ||| | |||| || || || | | |||||||| |||||| |||| Sbjct 4413 GAATTGATTTGTAGAGATGAAGGTTTACACACCGACTTTGCCTGTTT 4459 >seq3929 Length=34605 Score = 141 bits (156), Expect = 3e-28 Identities = 364/554 (66%), Gaps = 3/554 (1%) Strand=Plus/Plus Query 155979 CCGTGATTCTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATAC 156038 ||||||||||| | | || | ||| || ||| ||| || ||| || | ||| Sbjct 21137 CCGTGATTCTTTCTAATATCAATGAAATCAAAAATGTCACTGTGCCATGGTTCTAAGTAC 21196 Query 156039 ATAGCAAAACTACCATTCCTCTTG---CCACCCTGATCTACATACCGAGCAGTCTTATTG 156095 | ||||| |||| |||||| ||||| || || ||||| || ||||| |||||| Sbjct 21197 AAGGCAAAGGCACCAGGTCTCTTGTTACCACCTTGGTCGACATAACGTGCAGTGTTATTG 21256 Query 156096 AAGACACCTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAA 156155 || || | || ||| |||||||||||||| ||||| |||||||| || ||| | | | Sbjct 21257 AATACTCTTACCATTGGAATAATACCATTAGAAGTACCATTGGTACCAGCAATGTAAGCA 21316 Query 156156 CCAGATGAGCGAACATTATGAATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGA 156215 || | || |||| || || || |||| || || || || | | ||| || || | Sbjct 21317 CCGGTAGAACGAATGTTGTGGATGTGTAAACCGATTCCTCCAGCACTTTTTGAGATCAAA 21376 Query 156216 GCGCATTCCTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGA 156275 || || || | ||| | | |||||||||||||||||||||| | ||| | || | Sbjct 21377 GCACACGATTTCAAAGTGTCGTAAATACCTTCAATAGAATCATCCTTCATAGCAAGCAAG 21436 Query 156276 TAGCACGAACTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGA 156335 | || || | ||| |||| |||||| |||||||| |||| ||| | |||| Sbjct 21437 AAACATGAGGACATTTGTGGTCTTGGTGTACCAGCGTTAAATAAACAAGGAGAACCATGG 21496 Query 156336 ATAAAATACTTATTAGACATATAATCGTATGTCTCCTTAATCTTCTCAAGATTAGACCCG 156395 | || | | | |||||| | | || || || | | | | | || | ||| Sbjct 21497 GTGAAGAATCTTTGAGACATCAAGTTATAGGTTTCAATGACCCTTGGTATATCATTACCG 21556 Query 156396 TGAATACAGATAGAGACCCTCATCCACATATGCTGAGGACGCTCTACAATCACTCCATCA 156455 ||||||| || || |||||||| || ||| || || | || ||| | || | Sbjct 21557 TGAATACCGACAGCAACCCTCATGATCAAATGTTGTGGTCTTTCAGCAACCTTACCGTTG 21616 Query 156456 ATTCGCAGAAGGTATGCGCGTTCCAGAGTTTTAAACCCGAAATAATCAAACAGAAAATCA 156515 || || | | |||| | ||||| ||| || ||||| ||||||| | |||||| Sbjct 21617 ATACGTAACAAATATGATCTTTCCAAAGTCTTGAACCCAAAATAATTGTAGTTAAAATCT 21676 Query 156516 CGGTTGTAATCAAT 156529 | || |||| |||| Sbjct 21677 CTGTCGTAAACAAT 21690 >seq3543 Length=6020 Score = 114 bits (126), Expect = 4e-20 Identities = 306/462 (66%), Gaps = 8/462 (2%) Strand=Plus/Plus Query 288883 TCTAATATATCGGCTCTGTTTGTTGCTGCCAATACAACAATAGATTCGGTTTGCTTAAAT 288942 || || ||||| | ||| || || | ||||| ||||||| | || ||| | ||| Sbjct 1207 TCCAAAATATCTGGTCTATTAGTACCAGCCAAAACAACAACATGGTCAGTTGTATCAAAC 1266 Query 288943 CCATCCATACTTGTTAAAATTTGATTAAGTGTTTGTTCCCTTTCATCATTTGAACCTCTT 289002 |||||||| || | |||||| | ||| | ||| | ||||||||| ||| || Sbjct 1267 CCATCCATTTCCACCAACAATTGATTTAATGTGTTTTCACGTTCATCATTACCACCCATT 1326 Query 289003 GAATCACCCGAATCGCTCCtttttttACCAACAGCATCAATTTCGTCAATGAAAATCACA 289062 | ||| || ||| ||| |||||||| ||||||||||| |||| ||| || | | Sbjct 1327 ----CTCCCATTTC-CTC-TTTCTTTACCAATTGCATCAATTTCATCAACGAATATAATA 1380 Query 289063 CACGGAGAATTTTGTCTCGCAATTGCAAATAATTCTCTTACACGGGATGCTCCAAGACCA 289122 |||| ||| | ||| || |||||| || | ||||| || || || | |||| Sbjct 1381 GCAGGAGCCATTTCACGGGCAGTTTTAAATAAATCACGGACACGAGAAGCACCTACACCA 1440 Query 289123 ACATACATTTCTACAAATTCAGAAGCGGATACTTGAATGAATGTTACATTTGCTTCGCCT 289182 ||| ||||||| ||||| |||||| | || || | |||| || |||||| || Sbjct 1441 ACAAACATTTCGACAAACTCAGAACCCGAAACAGACAAAAATGGAACTCCTGCTTCACCA 1500 Query 289183 GCTACTGCCCTCGCCAGAAGTGTCTTACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCC 289242 || ||| | || | | ||| ||||| || || ||||| || ||| | | || Sbjct 1501 GCAGTAGCCTTGGCTAACAATGTTTTACCAGTACCTGGTGGACCAGATAAAATTGCCCCA 1560 Query 289243 TTTGGTACTTTTGCCCCAGCAGACTTATATTTCTCAGGGCTCTT-TAAAAATTCTACAAT 289301 || | |||||| || | |||||| | |||| |||| |||||| | |||| Sbjct 1561 CGAGGGATTTTTGCACCTAATTTTTCATATTTGTGAGGG-TCTTGTAAAAACTTGACAAA 1619 Query 289302 TTCCTCAAGTTCATATTTTGCCTCATCACATCCTGCTACATC 289343 |||| || ||| | ||| | || |||||||| || ||||| Sbjct 1620 TTCCATAATTTCTTCTTTAGATTCGTCACATCCAGCAACATC 1661 >seq393 Length=6568 Score = 104 bits (114), Expect = 7e-17 Identities = 192/282 (68%), Gaps = 0/282 (0%) Strand=Plus/Plus Query 302562 AATCATAATGTCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGT 302621 || |||||||||||||| ||||| ||||||||| ||||||||||| ||| | ||| Sbjct 2168 AACCATAATGTCTTCCAATGCCTTGACTAAACGACGTTGAATATAACCTGTTTCTGCTGT 2227 Query 302622 TTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTC 302681 ||| ||||| |||||||| ||||| | | |||| |||| || ||||| || | |||| Sbjct 2228 TTTCACAGCAGTATCAATAAGACCTTCTCTACCAGCCATGGCGTGGAAAAAGAATTCTTG 2287 Query 302682 CGGTCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGTC 302741 || || ||| | | | | || | ||||| ||||| | || || |||| || Sbjct 2288 TGGAGTTAACCCTCTTAAATAAGAATTTTCAACAAAACCTTTAGATTCAGGTGAATAATC 2347 Query 302742 GAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATC 302801 || ||||| ||||||| | | | || | ||| |||| || | || || || Sbjct 2348 ATCTTTTGTAAAATGTGGCAAAGAACGATCACCAAACCCGAATGGAATTCTTTTACCTTC 2407 Query 302802 AACGTTCTGCTGTCCCAGGCACGAAATCATCTGCGAAATATT 302843 || | || || || | |||| | ||| || |||||||| Sbjct 2408 GACAATTTGTTGACCAACACACGCAGACATTTGAGAAATATT 2449 Score = 84.2 bits (92), Expect = 6e-11 Identities = 112/155 (72%), Gaps = 3/155 (2%) Strand=Plus/Plus Query 301813 AGAATTTCTTCAATACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGCA 301872 |||||||| | || ||| |||||||| || || || ||| || | ||||||||| Sbjct 1401 AGAATTTCCTTAAGACGTGGAACACCCAATGTAACATT---CTTTGATGAGACACCAGCA 1457 Query 301873 AAGTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAATC 301932 | ||||||||||||| || | ||| || | |||||||||||| ||| || || | Sbjct 1458 TAATGGAAAGTATTCAAGGTCATTTGGGTGGCAGGCTCACCAATAGATTGAGCTGCCACA 1517 Query 301933 ATACCAACCATTTCTCCTGGTGCTACAATAGACTT 301967 | ||| |||||||| || || |||||||| || Sbjct 1518 ACACCCACCATTTCACCAGGATGAACAATAGATTT 1552 >seq3958 Length=30803 Score = 100 bits (110), Expect = 8e-16 Identities = 179/254 (70%), Gaps = 18/254 (7%) Strand=Plus/Plus Query 60122 CGAGTAATCTTGGATAATTGTGTGAAAATATACCTCTCGGATGCTGCG---TCCTTGCCA 60178 |||||||||| |||| |||||||||||| ||||| | || | | || || ||| Sbjct 19896 CGAGTAATCTCACTCAATTCTGTGAAAATATA--TCTCGCA-GCAGAGAAATCTTTACCA 19952 Query 60179 CCCATAAGACGGGTTCCAAATTGTCCGTTTGGCTGGAATAGATTAATGTTGTTAGAGCCT 60238 || | ||| | ||||| || ||||| | |||| ||||||||||| || || Sbjct 19953 CCAGCAGCACGCGAACCAAAAGAACCATTTGGTTTTAATACGTTAATGTTGTTTGATCCA 20012 Query 60239 ACGAAATTTTGAGCGAGACCAACAATA----GCACCATTTAAACTGGCTTCACCGTGATG 60294 ||||||||||| || ||||||| ||| |||| | | |||| |||||| ||||| Sbjct 20013 ACGAAATTTTGGGCAAGACCAATTATAGTTTGCACTAAT--GACTG--TTCACCATGATG 20068 Query 60295 ATATCCAGAATGTTCTGAAACATATCCACTG--AATTGTGCGACTTTAATTTCGGAGTGG 60352 |||||| | |||| | | || || | ||| |||||||| ||||||||||| Sbjct 20069 ATATCCCG--TGTTTTCACTCACATACCCTGCTAATTGTGCAACTTTAATTTCACTTCTC 20126 Query 60353 AGTTTTTTCTTGAA 60366 | |||||||||||| Sbjct 20127 AATTTTTTCTTGAA 20140 >seq3780 Length=17529 Score = 93.3 bits (102), Expect = 1e-13 Identities = 269/406 (66%), Gaps = 11/406 (3%) Strand=Plus/Plus Query 288963 TTGATTAAGTGTTTGTTCCCTTTCATCATTTGAACCTCTTGAATCACCCGAATCGCTCCt 289022 |||||| | |||| ||| | ||||||||| | ||| | | || ||| | | | Sbjct 12994 TTGATTCAATGTTGTTTCACGTTCATCATTGGCACCGGTAGCATTCCCC---TTGGAACG 13050 Query 289023 ttttttACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGC 289082 || |||||||| |||||||||||| |||| || | | | || | ||||| || || Sbjct 13051 TTGTTTACCAATAGCATCAATTTCATCAACAAACACAATTGAAGGGGCATTTTCTCGTGC 13110 Query 289083 AATTGCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTC 289142 | || ||| || || | || | || || |||| ||||||| ||||||| |||||||| Sbjct 13111 AGTTTTAAACAAATCACGAACTCTAGACGCACCAACACCAACAAACATTTCAACAAATTC 13170 Query 289143 AGAAGCGGATACTTGAAT-GAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAA 289201 ||| |||| || |||| || | || |||||| || || |||| | || || | Sbjct 13171 TGAACCGGAAAC-AGAATAAAACGGAACCCCTGCTTCACCAGCAGTTGCCTTGGCAAGTA 13229 Query 289202 GTGTCTTACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGCCCCAG 289261 || ||||| || || || || || ||| | | |||| || | ||| || || Sbjct 13230 ACGTTTTACCAGTACCTGGGGGACCAGATAAAATAGCTCCACGGGGAATTTTAGCACC-- 13287 Query 289262 CAGACTT--ATATTTCTCAGGGCTCTTTAAAAATTCTACAATTTCCTCAAGTTCATATTT 289319 || || |||||| || || | | || |||| |||| |||| || ||| | ||| Sbjct 13288 CAATTTTTCATATTTTTCTGGATTTTGCAAGAATTTAACAAATTCCATAACTTCTTGTTT 13347 Query 289320 TGCCTCATCACAT-CCTGCTACATCAGCAAAAGTAATATTAATATC 289364 || || | ||| ||||| ||||| || |||| |||| ||| Sbjct 13348 AGCTTC-TGCCATACCTGCAACATCTTTGAATTTAATTTTAACATC 13392 >seq4079 Length=5100 Score = 86.0 bits (94), Expect = 2e-11 Identities = 155/223 (70%), Gaps = 8/223 (4%) Strand=Plus/Plus Query 289030 CCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAATTGCA 289089 |||| || ||||||||| || || ||||| | | || | || || ||| || || | Sbjct 2174 CCAATAGAATCAATTTCATCCATAAAAATGATTGATGGTGCATGTTCTCTTGCCATCACG 2233 Query 289090 AATAATTCTCTTAC---ACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAA 289146 || || || || || ||| || || | |||| |||| ||| || ||||| ||| Sbjct 2234 AACAACTCCCTAACCATACGAGACCCTTCC---CCAATATACTTTTGCACTAATTCTGAA 2290 Query 289147 GCGGATACTTGAATGAATGTTACATTTGCT-TCGCCTGCTACTGCCCTCGCCAGAAGTGT 289205 | || || |||||||| ||||||| | | | | || ||||| || |||| | || Sbjct 2291 CCAGAAACACGAATGAAT-TTACATTCGGTATGGTGAGCAACTGCTCTTGCCAATAAGGT 2349 Query 289206 CTTACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGT 289248 ||||||||| || |||||||| | |||| ||| || |||||| Sbjct 2350 CTTACCTGTACCCGGTGGTCCATACAATATAACACCTTTTGGT 2392 >seq3673 Length=32929 Score = 86.0 bits (94), Expect = 2e-11 Identities = 297/456 (65%), Gaps = 12/456 (3%) Strand=Plus/Minus Query 133214 TTTATTTCTATGATTTTAGCGTTTTTTGCTGCGAGTGATGGTATTGTTCTTGAAAATTT- 133272 ||||| ||| |||| || || |||||||| |||||||||||| ||| || || Sbjct 11073 TTTATCTCTCGAGTTTTGGCATTCTTTGCTGCATCGGATGGTATTGTTAATGAGAACTTG 11014 Query 133273 -AGGAACACGGTTTATG-GGAGAAGTTCAACTGGCCGAAGCCCGTGCCTTTTATGGGCTA 133330 |||| | ||| || | |||||| ||| | |||| || |||| | | Sbjct 11013 GTGGAAAA---TTTCTGTGCAGAAGTGCAAATACCCGAGGCTAAACTGGTTTACAAGTTT 10957 Query 133331 CAGATTGCGATGGAAAATATCCATTCTATCACATATTCTACTCTAATTGATACTTACATC 133390 ||||| ||||||||| || ||||| || ||||| |||| || || || || Sbjct 10956 CAGATCATGATGGAAAACATTCATTCAGAGACTTATTCGTTGTTAATAGAAACATATTTC 10897 Query 133391 AAAGATACCGTCCAGAAGC--ACAAACTATTCAACGCCATTAGCGAATTTCCTTGTATTA 133448 ||||| ||| |||||| || | || || || ||| | | | || | ||| | Sbjct 10896 AAAGACCCCG--AAGAAGCAGACTTTTTGTTTAATGCTATTGACAATATCCCATTTATAA 10839 Query 133449 AAAAGAAATCTGACTGGGCTATTAAATGGATCCAGGACAAGCGTGCGAGTTTTGCTACTC 133508 ||| ||| | || ||||| || | |||||||||| | || ||| | |||| Sbjct 10838 GAAAAAAAGCCGATTGGGCAATCAGATGGATCCAGAGCGAGGATGCTTTGTATGCTGAGA 10779 Query 133509 GTCTCGTTGCTTTTGCTGTAGTAGAGGGCAtttttttCAGTGGTGCGTTCTGC-TCTATT 133567 | | ||||| ||||||| || || || || ||||||||||| |||| ||| | ||| Sbjct 10778 GATTGGTTGCATTTGCTGCTGTTGAAGGTATATTTTTCAGTGGCTCGTT-TGCAGCAATT 10720 Query 133568 TTTTGGCTTAAAAAGCGTGGTATTCTACCTGGACTGTGTTTTTCTAACGAACTTATTTCA 133627 || ||| | || || || ||| | | || || || ||||| || ||| | |||| Sbjct 10719 TTCTGGTTAAAGAAACGGGGTTTGATGCCGGGGTTGACATTTTCCAATGAATTAATTTGT 10660 Query 133628 AGGGACGAGGCACTTCACACCGAATTTGCCGTTTTA 133663 | ||||| | ||||||| || | |||| |||| Sbjct 10659 CGAGACGAAGGGATTCACACAGATTATGCCTGTTTA 10624 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471729534713790