Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Naumovozyma_20dairenensis_20[genbank_20GCA_5F001074275.1_202015-07-
10] 4,670 sequences; 13,985,759 total letters
Query= NC_023611.1
Length=198533
Score E
Sequences producing significant alignments: (Bits) Value
seq3520 123 3e-23
seq3058 89.7 7e-13
seq884 86.0 8e-12
>seq3520
Length=28158
Score = 123 bits (136), Expect = 3e-23
Identities = 241/353 (68%), Gaps = 6/353 (2%)
Strand=Plus/Plus
Query 168528 GAACTTTTATGGGTTATAAAAGGTTCAACTGATTCAAAACAATTAAATGATATAGGTGTT 168587
||| | |||||| || | || || |||||| | ||| ||||| ||| | || ||
Sbjct 20478 GAATTATTATGGTTTGTTGCTGGCTCTACTGATGCTAAAATATTAAGTGAAAAGGGAGTG 20537
Query 168588 AAAGTTTGGAACGATAATGGTTCTCGTGAATTTTTAGATTTATGTGGTTTTACCGAAAGA 168647
|| ||||| | | ||||| |||||||||||||| || || || || || | |
Sbjct 20538 AAGATTTGGGAAGGCAATGGATCTCGTGAATTTTTGGACAAATTAGGGTTGACTCATCGT 20597
Query 168648 AAAGAAGGTGATTTAGGTCCAATTTATGGATTTCAATGGAGACATGCAGGAGCTCAATAT 168707
||||| ||||| || ||| |||| || || |||||||||||| ||||| |||||
Sbjct 20598 CGTGAAGGAGATTTGGGACCAGTTTACGGGTTCCAATGGAGACATTTTGGAGCAGAATAT 20657
Query 168708 ATTGACTGTGATACAGATTACACCGGACAAGGAGTAGACCAATTAAGTCAA-AC--TATA 168764
| || |||||| | ||||| ||||| |||||| | || |||||| ||| || |||
Sbjct 20658 AAAGATTGTGATTCCGATTATACCGGTCAAGGATTTGATCAATTA---CAAGACGTTATT 20714
Query 168765 AATACTTTACACAACAATCCGGAAAATAGAAGAATATTAATTAATAGTTGGGATGTACCA 168824
|| | || | | ||||| | |||||||||| | || | |||| || |||
Sbjct 20715 AAAAAATTGAAAACAAATCCATATGATAGAAGAATTATCATGTCTGCTTGGAATCCGCCA 20774
Query 168825 CAACTTGATAAAATGGTTCTTCCCCCTTGTCACACTTTAGTGCAATTTTATGT 168877
| ||| |||||||| | || || |||||| ||| |||||||||||
Sbjct 20775 GATTTTGCTAAAATGGCCTTGCCTCCATGTCACGTTTTCTGTCAATTTTATGT 20827
>seq3058
Length=7115
Score = 89.7 bits (98), Expect = 7e-13
Identities = 124/168 (74%), Gaps = 8/168 (5%)
Strand=Plus/Plus
Query 51877 ATGATGTACT-ATTA--AATAGGCAACCAACACTTCATAAAGCTTCTATGCAAAGTTTTA 51933
||||||| | |||| ||| | ||||||||| | ||||| ||||||||| || ||
Sbjct 1853 ATGATGTGGTTATTATGAATCGTCAACCAACATTGCATAAGGCTTCTATGATGGGTCATA 1912
Query 51934 AAGTTAAAATTCAACCAGTA---AAAACATTTAAAATGA-ATTTGGCTATGACTAAAGCA 51989
|||| | | | ||||| | ||||| ||||| || | ||| || | ||| |||
Sbjct 1913 AAGTGAGAGTATTACCAGGAGAGAAAAC-TTTAAGATTACATTATGCCAATACTGGTGCA 1971
Query 51990 TATAATGCTGATTTTGATGGGGATGAAATGAATTTACATGTTCCTCAA 52037
|||||||||||||||||||||||||||||||| | ||| | || |||
Sbjct 1972 TATAATGCTGATTTTGATGGGGATGAAATGAACATGCATTTCCCCCAA 2019
>seq884
Length=30835
Score = 86.0 bits (94), Expect = 8e-12
Identities = 104/142 (73%), Gaps = 0/142 (0%)
Strand=Plus/Minus
Query 193450 AAATAGGGGATAAATTTTGTTCAGGAATGGCCCAAAAAGGAACTTGTGGTATGATTTATT 193509
|||| |||||||||||| ||| || | |||||||| ||| |||| | | |||
Sbjct 17850 AAATTGGGGATAAATTTGCTTCGAGACACGGTCAAAAAGGTACTATTGGTGTTACCTATA 17791
Query 193510 CACAAGAAGATATGCCATTTACAGCTTCAGGTATGGTACCAGATATTATTATTAATCCAA 193569
||| ||||||||||| |||||||| |||||| || ||||| | || ||||| ||
Sbjct 17790 GACACGAAGATATGCCTTTTACAGCAGAAGGTATTGTTCCAGACTTAATCATTAACCCTC 17731
Query 193570 ATTGTATTCCATCCAGAATGAC 193591
|| ||||||||| | |||||
Sbjct 17730 ATGCTATTCCATCTCGTATGAC 17709
Score = 86.0 bits (94), Expect = 8e-12
Identities = 120/165 (73%), Gaps = 4/165 (2%)
Strand=Plus/Minus
Query 192952 ATTATCCACAAAAACCCCTTGTTACCAC-AGAT-ATTGCAAAATTTAATAAATTAGACGA 193009
|||||||||| ||||| | | |||||| |||| | || || |||| | | || ||
Sbjct 18384 ATTATCCACAGAAACCATTGGGTACCACGAGATCAATGGAATATTTGA--AGTTCCGTGA 18327
Query 193010 TTATCCAAATGGTATTAATGCTATTGTTGCTATAGCTTGCTATACTGGTTATAATCAAGA 193069
|||| |||| ||||| ||||||||||| || || ||| | ||||||||||||||
Sbjct 18326 ACTTCCAGCTGGTCAAAATGCCATTGTTGCTATTGCATGTTATTCCGGTTATAATCAAGA 18267
Query 193070 AGACAGTATTATTTTAAATAAAGCTTCTATTGAAAGAGGATTATT 193114
||| || ||| | ||| || | || ||||| |||||||| ||
Sbjct 18266 AGATTCCATGATTATGAATCAATCATCCATTGATAGAGGATTGTT 18222
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 635140521507600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |