Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Naumovozyma_20dairenensis_20[genbank_20GCA_5F001074275.1_202015-07- 10] 4,670 sequences; 13,985,759 total letters Query= NC_023611.1 Length=198533 Score E Sequences producing significant alignments: (Bits) Value seq3520 123 3e-23 seq3058 89.7 7e-13 seq884 86.0 8e-12 >seq3520 Length=28158 Score = 123 bits (136), Expect = 3e-23 Identities = 241/353 (68%), Gaps = 6/353 (2%) Strand=Plus/Plus Query 168528 GAACTTTTATGGGTTATAAAAGGTTCAACTGATTCAAAACAATTAAATGATATAGGTGTT 168587 ||| | |||||| || | || || |||||| | ||| ||||| ||| | || || Sbjct 20478 GAATTATTATGGTTTGTTGCTGGCTCTACTGATGCTAAAATATTAAGTGAAAAGGGAGTG 20537 Query 168588 AAAGTTTGGAACGATAATGGTTCTCGTGAATTTTTAGATTTATGTGGTTTTACCGAAAGA 168647 || ||||| | | ||||| |||||||||||||| || || || || || | | Sbjct 20538 AAGATTTGGGAAGGCAATGGATCTCGTGAATTTTTGGACAAATTAGGGTTGACTCATCGT 20597 Query 168648 AAAGAAGGTGATTTAGGTCCAATTTATGGATTTCAATGGAGACATGCAGGAGCTCAATAT 168707 ||||| ||||| || ||| |||| || || |||||||||||| ||||| ||||| Sbjct 20598 CGTGAAGGAGATTTGGGACCAGTTTACGGGTTCCAATGGAGACATTTTGGAGCAGAATAT 20657 Query 168708 ATTGACTGTGATACAGATTACACCGGACAAGGAGTAGACCAATTAAGTCAA-AC--TATA 168764 | || |||||| | ||||| ||||| |||||| | || |||||| ||| || ||| Sbjct 20658 AAAGATTGTGATTCCGATTATACCGGTCAAGGATTTGATCAATTA---CAAGACGTTATT 20714 Query 168765 AATACTTTACACAACAATCCGGAAAATAGAAGAATATTAATTAATAGTTGGGATGTACCA 168824 || | || | | ||||| | |||||||||| | || | |||| || ||| Sbjct 20715 AAAAAATTGAAAACAAATCCATATGATAGAAGAATTATCATGTCTGCTTGGAATCCGCCA 20774 Query 168825 CAACTTGATAAAATGGTTCTTCCCCCTTGTCACACTTTAGTGCAATTTTATGT 168877 | ||| |||||||| | || || |||||| ||| ||||||||||| Sbjct 20775 GATTTTGCTAAAATGGCCTTGCCTCCATGTCACGTTTTCTGTCAATTTTATGT 20827 >seq3058 Length=7115 Score = 89.7 bits (98), Expect = 7e-13 Identities = 124/168 (74%), Gaps = 8/168 (5%) Strand=Plus/Plus Query 51877 ATGATGTACT-ATTA--AATAGGCAACCAACACTTCATAAAGCTTCTATGCAAAGTTTTA 51933 ||||||| | |||| ||| | ||||||||| | ||||| ||||||||| || || Sbjct 1853 ATGATGTGGTTATTATGAATCGTCAACCAACATTGCATAAGGCTTCTATGATGGGTCATA 1912 Query 51934 AAGTTAAAATTCAACCAGTA---AAAACATTTAAAATGA-ATTTGGCTATGACTAAAGCA 51989 |||| | | | ||||| | ||||| ||||| || | ||| || | ||| ||| Sbjct 1913 AAGTGAGAGTATTACCAGGAGAGAAAAC-TTTAAGATTACATTATGCCAATACTGGTGCA 1971 Query 51990 TATAATGCTGATTTTGATGGGGATGAAATGAATTTACATGTTCCTCAA 52037 |||||||||||||||||||||||||||||||| | ||| | || ||| Sbjct 1972 TATAATGCTGATTTTGATGGGGATGAAATGAACATGCATTTCCCCCAA 2019 >seq884 Length=30835 Score = 86.0 bits (94), Expect = 8e-12 Identities = 104/142 (73%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 193450 AAATAGGGGATAAATTTTGTTCAGGAATGGCCCAAAAAGGAACTTGTGGTATGATTTATT 193509 |||| |||||||||||| ||| || | |||||||| ||| |||| | | ||| Sbjct 17850 AAATTGGGGATAAATTTGCTTCGAGACACGGTCAAAAAGGTACTATTGGTGTTACCTATA 17791 Query 193510 CACAAGAAGATATGCCATTTACAGCTTCAGGTATGGTACCAGATATTATTATTAATCCAA 193569 ||| ||||||||||| |||||||| |||||| || ||||| | || ||||| || Sbjct 17790 GACACGAAGATATGCCTTTTACAGCAGAAGGTATTGTTCCAGACTTAATCATTAACCCTC 17731 Query 193570 ATTGTATTCCATCCAGAATGAC 193591 || ||||||||| | ||||| Sbjct 17730 ATGCTATTCCATCTCGTATGAC 17709 Score = 86.0 bits (94), Expect = 8e-12 Identities = 120/165 (73%), Gaps = 4/165 (2%) Strand=Plus/Minus Query 192952 ATTATCCACAAAAACCCCTTGTTACCAC-AGAT-ATTGCAAAATTTAATAAATTAGACGA 193009 |||||||||| ||||| | | |||||| |||| | || || |||| | | || || Sbjct 18384 ATTATCCACAGAAACCATTGGGTACCACGAGATCAATGGAATATTTGA--AGTTCCGTGA 18327 Query 193010 TTATCCAAATGGTATTAATGCTATTGTTGCTATAGCTTGCTATACTGGTTATAATCAAGA 193069 |||| |||| ||||| ||||||||||| || || ||| | |||||||||||||| Sbjct 18326 ACTTCCAGCTGGTCAAAATGCCATTGTTGCTATTGCATGTTATTCCGGTTATAATCAAGA 18267 Query 193070 AGACAGTATTATTTTAAATAAAGCTTCTATTGAAAGAGGATTATT 193114 ||| || ||| | ||| || | || ||||| |||||||| || Sbjct 18266 AGATTCCATGATTATGAATCAATCATCCATTGATAGAGGATTGTT 18222 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635140521507600