Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Naumovozyma_20dairenensis_20[genbank_20GCA_5F001074275.1_202015-07- 10] 4,670 sequences; 13,985,759 total letters Query= NC_023615.1 Length=196456 Score E Sequences producing significant alignments: (Bits) Value seq3520 132 6e-26 seq3058 89.7 6e-13 >seq3520 Length=28158 Score = 132 bits (146), Expect = 6e-26 Identities = 293/435 (67%), Gaps = 12/435 (3%) Strand=Plus/Plus Query 171534 ACATTTAGAATTTGATTTAAGTAGTGGAACTATACCATTACTTACTACaaaaaaaaTTGT 171593 ||| ||| |||||||||| | || ||| | || ||| | || || |||||| || Sbjct 20399 ACAATTAAGATTTGATTTATCAAATGATACTTTTCCTTTATTAACCACTAAAAAA---GT 20455 Query 171594 ATATACTAAT---ATCCTTAAAGAACTTTTATGGGTTATTAAAGGTTCAACTGATTCAAA 171650 || | | || ||| | | ||| | |||||| || || || || |||||| | || Sbjct 20456 ATTTTCAAAAGGGATCATACATGAATTATTATGGTTTGTTGCTGGCTCTACTGATGCTAA 20515 Query 171651 ACAATTAAATGATATAGGTGTTAAAGTTTGGAATGATAATGGTTCTCGTGAATTTTTAGA 171710 | ||||| ||| | || || || ||||| | | ||||| |||||||||||||| || Sbjct 20516 AATATTAAGTGAAAAGGGAGTGAAGATTTGGGAAGGCAATGGATCTCGTGAATTTTTGGA 20575 Query 171711 TTTATGCGGGTTTACTGAAAGAAAAGAAGGTGATTTAGGTCCAATTTATGGATTTCAATG 171770 || ||||| ||| | | ||||| ||||| || ||| |||| || || ||||| Sbjct 20576 CAAATTAGGGTTGACTCATCGTCGTGAAGGAGATTTGGGACCAGTTTACGGGTTCCAATG 20635 Query 171771 GAGACATGCAGGGGCTCAATATATCGACTGTTATACAGATTACACAGGACAAGGAGTGGA 171830 ||||||| || || |||||| || ||| || | ||||| || || |||||| | || Sbjct 20636 GAGACATTTTGGAGCAGAATATAAAGATTGTGATTCCGATTATACCGGTCAAGGATTTGA 20695 Query 171831 CCAATTAAGTCAA-AC--TATTAATACTTTACAAAACAACCCAGAAAGTAGAAGGATGTT 171887 |||||| ||| || |||||| | || ||| || ||| | |||||| || | Sbjct 20696 TCAATTA---CAAGACGTTATTAAAAAATTGAAAACAAATCCATATGATAGAAGAATTAT 20752 Query 171888 AATTGATAGTTGGAATGTACCTCAACTTGATAAAATGGTTCTTCCTCCTTGCCACACTTT 171947 || | ||||||| || | ||| |||||||| | ||||| || ||| ||| Sbjct 20753 CATGTCTGCTTGGAATCCGCCAGATTTTGCTAAAATGGCCTTGCCTCCATGTCACGTTTT 20812 Query 171948 AGCACAATTTTATGT 171962 ||||||||||| Sbjct 20813 CTGTCAATTTTATGT 20827 >seq3058 Length=7115 Score = 89.7 bits (98), Expect = 6e-13 Identities = 124/168 (74%), Gaps = 8/168 (5%) Strand=Plus/Plus Query 50327 ATGATGTACT-ATTA--AATAGGCAACCAACACTTCATAAAGCTTCTATGCAAAGTTTTA 50383 ||||||| | |||| ||| | ||||||||| | ||||| ||||||||| || || Sbjct 1853 ATGATGTGGTTATTATGAATCGTCAACCAACATTGCATAAGGCTTCTATGATGGGTCATA 1912 Query 50384 AAGTTAAAATTCAACCAGTA---AAAACATTTAAAATGAATTTA-GCTATGACTAAAGCA 50439 |||| | | | ||||| | ||||| ||||| || | ||| || | ||| ||| Sbjct 1913 AAGTGAGAGTATTACCAGGAGAGAAAAC-TTTAAGATTACATTATGCCAATACTGGTGCA 1971 Query 50440 TATAATGCTGATTTTGATGGGGATGAAATGAATTTACATGTTCCTCAA 50487 |||||||||||||||||||||||||||||||| | ||| | || ||| Sbjct 1972 TATAATGCTGATTTTGATGGGGATGAAATGAACATGCATTTCCCCCAA 2019 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628494509491200