Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Naumovozyma_20dairenensis_20[genbank_20GCA_5F001074275.1_202015-07- 10] 4,670 sequences; 13,985,759 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq3714 217 1e-51 seq3673 201 9e-47 seq3577 178 1e-39 seq3520 86.0 5e-12 >seq3714 Length=15575 Score = 217 bits (240), Expect = 1e-51 Identities = 587/881 (67%), Gaps = 29/881 (3%) Strand=Plus/Plus Query 43707 TGTTTCCAATTCAATATCATGACATATGGCAAATGTACAAAAAAGCACAGGCGTCATTTT 43766 |||| ||||| ||| ||||| || ||| | | ||||| || || | || || || | Sbjct 3877 TGTTCCCAATCAGATACCATGAAATTTGGAACTTTTACAAGAAGGCTGAAGCTTCCTTCT 3936 Query 43767 GGACAGCAGAAGAAGTTGATTTGACTAAAGACTTAGCACATTGGATTGC---ATTAAAAC 43823 |||| || |||||| ||||||||| |||||| || | | |||| |||||| Sbjct 3937 GGACTGCTGAAGAAATTGATTTGAGTAAAGATTTGGATGACTGGAACAACAAATTAAATG 3996 Query 43824 CACAAGAAAAACATTTTATATCTTTGGTTTTGGCGTTTTTTGCTGCGAGCGACGGGATAG 43883 | | |||| | ||||||| ||| || ||||| |||||||| || ||| || || | Sbjct 3997 AAAATGAAAGATATTTTATTTCTAGAGTATTGGCATTTTTTGCCGCTTCCGATGGTATTG 4056 Query 43884 TCAATGAAAATTTGGTTAGTCGGTTTGCGCAA--GAAGTTCAATTACCAGAAGCACGATG 43941 | ||||||||| || | ||| | ||| ||||||||| | || ||||| || Sbjct 4057 TTGGTGAAAATTTAATT-GAAAATTT-CTCAACTGAAGTTCAACTTCCTGAAGCCAAATC 4114 Query 43942 TTTTTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTACAGTCTTCTGAT 44001 || ||||| || ||||| || ||||| |||||||| |||| || | | |||| Sbjct 4115 ATTCTATGGTTTCCAAATCATGATGGAAAACATTCATTCAGAAACCTATTCTTTATTGAT 4174 Query 44002 AGATACGTACATCAAAGATGGGCACGAGAAGCATCGATTGTTTAATGCGATAGA-AACAG 44060 || || || ||||||||| || ||| || ||||| ||||| || | || | Sbjct 4175 TGAAACATATATCAAAGATCCCCAAGAGGCTGATTACTTGTTCAATGCCATTGCTAATAT 4234 Query 44061 TACCTGCGATTAAACATAAAGCAGACTGGGCCCTTAAATGGATAAATTCAA----ATGAT 44116 | | || ||| || | ||||| || ||||| | |||||||| |||| |||| Sbjct 4235 TCCATGT-ATTCAAAAGAAAGCTGATTGGGCTATCAAATGGAT----TCAAGATGATGAA 4289 Query 44117 TCTTT---TGGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGA 44173 | || ||| ||| || | || || ||||| | ||| ||||| || ||||| || Sbjct 4290 GCCTTATATGGTGAAAGATTAGTAGCTTTTGCTGCTGTTGAAGGTATCTTCTTCAGTGGT 4349 Query 44174 TCGTTTGCGGCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCA 44233 || ||||| | || || ||||| || || ||||||||||||| || ||||| || ||| Sbjct 4350 TCATTTGCTTCTATTTTCTGGTTGAAAAAGAGAGGTTTGATGCCAGGTTTGACTTTCTCA 4409 Query 44234 AATGAGTTAATAAGTCGTGATGAAGGCTTACATTGCGATTTTGCTTGCTTGTTACTTGGA 44293 ||||| || || || | |||||||| ||||| ||| ||||| || |||||| ||| Sbjct 4410 AATGAATTGATTTGTAGAGATGAAGGTTTACACACCGACTTTGCCTGTTTGTTATTTGCT 4469 Query 44294 TATCTAGGAGACGATAAGCCTTCATGTAAGACAATT-ACAGATATTGTTGTAGAGGCAGT 44352 || | | ||| ||| || || ||| || | ||| ||| || || || || Sbjct 4470 CAT-TTGCAGA--ATAGACCATCTCCAGAGATTGTTGAAAGA-ATTATTACTGAAGCTGT 4525 Query 44353 AAAGATAGAACAAGAATTTATGACAACAGCATTACCTGTAAATTTAATAGGAATGAA-TG 44411 | | ||| |||||| | || || | || || || | || ||||| || Sbjct 4526 TGATGTTGAAAAAGAATACTTTACTGATGCTCTTCCAGTGTCATTGTTGGGTATGAACTG 4585 Query 44412 -AACTTTTGATGAACCAATATATTGAATACATTGCAGATCGTTTACTTTTGGAACTGGGT 44470 ||| |||||| ||||| ||||||| | | || ||| | || | |||| | ||| Sbjct 4586 TAAC--TTGATGTGTCAATACATTGAATTCGTCGCTGATAGATTGTTGTTGGCTTTAGGT 4643 Query 44471 TGCGATAAACACTATATTGTACAAAACCCGTTTGATTTTATGGAAAATATTTCGTTGGAA 44530 | | ||| || | ||| || || || ||||| |||||||| ||||| |||| Sbjct 4644 AACAAGAAAGTATACAATGTTACTAATCCATTCGATTTCATGGAAAACATTTCCTTGGCC 4703 Query 44531 GGCAAAACAAACTTTTTTGAAAAACGCGTTGGAGAATATCA 44571 || || || || || ||||||||| | ||| ||| ||||| Sbjct 4704 GGTAAGACCAATTTCTTTGAAAAAAGAGTTTCAGACTATCA 4744 >seq3673 Length=32929 Score = 201 bits (222), Expect = 9e-47 Identities = 567/859 (66%), Gaps = 29/859 (3%) Strand=Plus/Minus Query 43711 TCCAATTCAATATCATGACATATGGCAAATGTACAAAAAAGCACAGGCGTCATTTTGGAC 43770 |||||| | |||| || ||||||| | || ||||| | || ||||| ||||| Sbjct 11203 TCCAATAAAGTATCCCGAGTTATGGCAGTTCTATAAAAAGTCGTTAGCCTCATTCTGGAC 11144 Query 43771 AGCAGAAGAAGTTGATTTGACTAAAGACTTAGCACATTGGATTGCATTAA----AACCAC 43826 || ||||| |||| |||| |||||| || | |||||| | | ||| ||| | Sbjct 11143 TGCTGAAGAGCTTGACTTGAGTAAAGATTTGGATGATTGGAAT--AATAAGATGAACGAA 11086 Query 43827 AA-GAAAAACATTTTATATCTTTGGTTTTGGCGTTTTTTGCTGCGAGCGACGGGATAGTC 43885 || |||| | ||||| ||| |||||||| || |||||||| || || || || Sbjct 11085 AACGAAAGATTCTTTATCTCTCGAGTTTTGGCATTCTTTGCTGCATCGGATGGTATTGTT 11026 Query 43886 AATGAAAATTTGGTTAGTCGGTT-TGCGCAAGAAGTTCAATTACCAGAAGCACGATGTTT 43944 ||||| || ||||| || || ||| ||||| ||| |||| || || | | Sbjct 11025 AATGAGAACTTGGTGGAAAATTTCTGTGCA-GAAGTGCAAATACCCGAGGCTAAACTGGT 10967 Query 43945 TTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTACAGTCTTCTGATAGA 44004 ||| |||||| || || ||||| |||||||| || | || | | ||||| Sbjct 10966 TTACAAGTTTCAGATCATGATGGAAAACATTCATTCAGAGACTTATTCGTTGTTAATAGA 10907 Query 44005 TACGTACATCAAAGATGGGCACGA-GAAGCATCGA----TTGTTTAATGCGATAGAAACA 44059 || || ||||||| | ||| |||||| || ||||||||||| || || | Sbjct 10906 AACATATTTCAAAGAC---CCCGAAGAAGCA--GACTTTTTGTTTAATGCTATTGACAAT 10852 Query 44060 GTACCTGCGATTAAACATAAAGCAGACTGGGCCCTTAAATGGATAAATTCAAATGATTCT 44119 | || || | | | ||||| || ||||| | | |||||| | | ||| || Sbjct 10851 ATCCCATTTATAAGAAAAAAAGCCGATTGGGCAATCAGATGGATCCAGAGCGAGGATGCT 10792 Query 44120 TT---TGGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAG--GAT 44174 || || || || | || || ||||| | ||| ||||| || || |||||| | | Sbjct 10791 TTGTATGCTGAGAGATTGGTTGCATTTGCTGCTGTTGAAGGTATATT--TTTCAGTGGCT 10734 Query 44175 CGTTTGCGGCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCAA 44234 ||||||| || || || |||||||||||||| ||||||||||| |||||||| ||||| | Sbjct 10733 CGTTTGCAGCAATTTTCTGGTTAAAGAAACGGGGTTTGATGCCGGGGTTGACATTTTCCA 10674 Query 44235 ATGAGTTAATAAGTCGTGATGAAGGCTTACATTGCGATTTTGCTTGCTTGTTACTTGGAT 44294 |||| ||||| |||| || ||||| | || |||| ||| || || ||| || || Sbjct 10673 ATGAATTAATTTGTCGAGACGAAGGGATTCACACAGATTATGCCTGTTTATTATTTTCAT 10614 Query 44295 ATCTAGGAGACGATAAGCCTTCATGTAAGACAATTACAGATATTGTTGTAGAGGCAGTAA 44354 || | | | |||| ||||| | | | |||| | || | ||||| || Sbjct 10613 ATTT---AAAAAATAAACCTTCTTCAGAAATAATTGAGAAAATCATCACCGAGGCTGTTG 10557 Query 44355 AGATAGAACAAGAATTTATGACAACAGCATTACCTGTAAATTTAATAGGAATGAATGAAC 44414 | || || |||||| | | | || | || ||| ||| | ||||||||| Sbjct 10556 ATATCGAGAAAGAATATTTCAGCGATGCGCTTCCAGTATCCTTATTGGGAATGAATTGTG 10497 Query 44415 TTTTGATGAACCAATATATTGAATACATTGCAGATCGTTTACTTTTGGAACTGGGTTGCG 44474 |||||| ||| ||| |||||| |||| ||| | ||||| | | | || Sbjct 10496 ACTTGATGTGCCAGTATGTTGAATTTGTTGCTGATAGATTACTAGTAGCTTTTGGAAATA 10437 Query 44475 ATAAACACTATATTGTACAAAACCCGTTTGATTTTATGGAAAATATTTCGTTGGAAGGCA 44534 | || |||| | ||| ||||| ||||||||||||||||||||||| |||| || | Sbjct 10436 AAAAGTACTACAATGTTACCAACCCATTTGATTTTATGGAAAATATTTCCTTGGCTGGTA 10377 Query 44535 AAACAAACTTTTTTGAAAA 44553 |||| || || |||||||| Sbjct 10376 AAACTAATTTCTTTGAAAA 10358 >seq3577 Length=2981 Score = 178 bits (196), Expect = 1e-39 Identities = 264/372 (71%), Gaps = 18/372 (5%) Strand=Plus/Plus Query 19420 AAACAACCTCCCAAAATTGTAAATGGTCCTGAAATCTTAAATAAATATGTAGGTCAATCG 19479 ||| ||||| |||||||| |||||||| ||||| || | ||||||||| ||| ||| Sbjct 1395 AAAGAACCT---AAAATTGTCAATGGTCCAGAAATGTTGAGTAAATATGTTGGTGCATCA 1451 Query 19480 GAAGAAAATGTACGACGTTTGTTTGCTGACGCTGAAGAAGAACAAAAACGTTTAGGGCGC 19539 ||||||||| | || ||||||| || ||||||| |||| | ||| | | || | Sbjct 1452 GAAGAAAATATTCGTAATTTGTTTAAAGATGCTGAAGCAGAATATAAAT-TAAAAGGTGA 1510 Query 19540 AAAAGTTC---TTTGCACATTATAATACTAGATGAATTGGACGCAATCTGTAAGCAAAGA 19596 | | ||| ||| || |||| || | ||||||||||| | | | ||| |||||| Sbjct 1511 AGA--TTCAGATTTACATGTTATTATTTTCGATGAATTGGATTCGGTATTTAAACAAAGA 1568 Query 19597 GGTTCTGG---------TGTAAATGGAGTACATGACACTGTTGTCAATCAACTCCTGTCA 19647 || || || || | ||| || ||| | ||||||||||||| | | || Sbjct 1569 GGATCAGGGAAATCCGATGGTACTGGTGTTGGTGATAATGTTGTCAATCAATTATTATCG 1628 Query 19648 AAATTAGACGGTGTTAACCAACTGAATAATATTTTAGTTATTGGCATGACTAATAGACTG 19707 ||| | || |||||| | ||| ||||||||||||| || ||||| ||||||||| | || Sbjct 1629 AAAATGGATGGTGTTGATCAATTGAATAATATTTTGGTGATTGGTATGACTAATCGTTTG 1688 Query 19708 GAATTAATAGACAGCGCCTTATTACGACCCGGTCGGTTGGAAATAAAGATCGAAATTAAC 19767 || || || || | || |||||| |||| ||| | || ||||| | || |||||| | Sbjct 1689 GATTTGATCGATACAGCTTTATTAAGACCTGGTAGATTTGAAATTCAAATTGAAATTTCC 1748 Query 19768 TTACCCGATGAA 19779 ||||| |||||| Sbjct 1749 TTACCTGATGAA 1760 >seq3520 Length=28158 Score = 86.0 bits (94), Expect = 5e-12 Identities = 152/222 (68%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 41106 TCATGTCAATTGTATCAAAGATCAGGTGACATGGGACTAGGGGTCCCGTTTAACATAGCG 41165 || ||| |||||||||||| || |||| ||||| |||| || || ||||| || || Sbjct 20895 TCTTGTTTATTGTATCAAAGGTCTTGTGATATGGGGTTAGGTGTACCATTTAATATTGCA 20954 Query 41166 AGTTATGCTCTGCTCACGTATATGATTGCACACGTTACCAATTTAAAACCTGGTGAATTT 41225 || ||| | | || | ||||||||||| || || | | |||||||||| Sbjct 20955 TCCTACGCTTTATTAACCAAGATGATTGCACATGTGGTGGATATGGACTGTGGTGAATTT 21014 Query 41226 GTTCACACGTTAGGAGATGGACATATTTACATTAATCACATAGAGCCGTTAACAGAACAA 41285 |||| || ||||| |||| |||| | || | | || ||||| | |||| ||||||| Sbjct 21015 ATTCATACTTTAGGTGATGCACATGTCTATTTGGACCATATAGATGCCTTAAAAGAACAA 21074 Query 41286 CTGACACGAAAACCTAGACCATTTCCAACGCTACTTATTAAA 41327 | | ||| |||| || |||||| | || |||| ||| Sbjct 21075 TTTGAAAGAATCCCTAAACAATTTCCCAAATTAGTTATCAAA 21116 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397433378543350