Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Naumovozyma_20dairenensis_20[genbank_20GCA_5F001074275.1_202015-07- 10] 4,670 sequences; 13,985,759 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq3929 208 1e-48 seq3714 132 6e-26 seq4378 93.3 5e-14 seq3780 86.0 8e-12 >seq3929 Length=34605 Score = 208 bits (230), Expect = 1e-48 Identities = 833/1293 (64%), Gaps = 39/1293 (3%) Strand=Plus/Plus Query 110698 TCTTCTCAGGTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTG 110757 |||||| ||| ||||| | |||||||||||||| |||||||| |||||||| ||||| Sbjct 20200 TCTTCTAGAGTAAATGTTAGAAGTGTATGGTTCAAAACATTCATTGTTACCCAAAATTTG 20259 Query 110758 TGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTT 110817 || ||||| || || ||||||||||| | ||| | ||| | | ||| | | Sbjct 20260 TGATGTGGAAGCAGTAGGCATTGGTGCAACCAACAAGGAGTTTCTCATACCATGTTTGGC 20319 Query 110818 GATGCGTTCCTTGAGAACATCCCAGTCG--TAGTTGAGCTTGGTTTCACCTTCCCACATG 110875 | || || | |||||| || || || || ||||||| |||| ||| Sbjct 20320 CAAATCTTGTTTTAATGTATCCCAATCCCATAATTCAG-TTGGTTTTCTGTTCC-ACAAA 20377 Query 110876 TCAAACTGAAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGG 110935 ||||| || | | ||||| || || |||||||| | ||||||| |||| ||||| Sbjct 20378 TCAAATTGTAATAAACCTTGAGAGGCTGGAGAACCTGGATAGGTTTCGTAGGCACCTTCT 20437 Query 110936 GCTTCAGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGA 110995 ||| |||||||||| || || | | || || || || || ||||| || || Sbjct 20438 TCTTTAGCCAATTCAATTGAAGCTTCAACAGCAGCATGGTAGATAGTCTCAAAAATTTGA 20497 Query 110996 GCATTCATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAA---ATAAATACA 111052 |||| || | ||||| | || ||||||| ||| | ||| ||||| || Sbjct 20498 ATGTTCAATTCTCTAGCTTCTTGAGAGTCAAATG-GTAAT--CTCAATTCCATAAAGGCA 20554 Query 111053 TCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGA-CTTTCGCGC 111111 || || | |||||||||||||||| |||| |||||||||| ||| || || ||||| || Sbjct 20555 TCAGCCAAACCTTGAACACCCAAAGCAATTGGTCTGTGTCTCATGTTTGATCTTTC-AGC 20613 Query 111112 AGTCT-CAACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCT 111170 ||| || || ||| || | |||||| |||| ||| | || ||| |||| || Sbjct 20614 -TTCTGGGACTGGGTAATGGTTACGGTCAATAACTCTGTTCAAGTTACGGGTGACAACCT 20672 Query 111171 TTGTGATTTCATGAAGTTTTTCA---TAATCAAAAGTGCGAGTCTCTTCATT---GACAT 111224 | |||| | ||| | ||| ||| | | |||| | | || ||||| ||| Sbjct 20673 TAGTGACCTGATGTAATTTGTCAAAGTTGTACCAAGTACTTTTTTCATCATTTTCAACAA 20732 Query 111225 ACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACT 111284 | ||| | ||| || || ||||| || |||||||| ||||| | | | || | Sbjct 20733 ATGATGGCAAGGCAATGGAAGCCAAGTTACAAACAGCAACTTCATCTGGAGCAGAATATT 20792 Query 111285 CTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCT 111344 | | |||||| ||| ||||||||| || || | ||||| ||||||||||| | Sbjct 20793 CAACAATTTCACAACACAAGTTGGAAGATTTGATAATACCCAAGTTCTTTTGGTTGGATT 20852 Query 111345 TCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGA 111404 | ||||| || | ||| || || | ||| | || || || || || || || | | | Sbjct 20853 TGTTGTTACATGAATCTTTATATAACATAAATGGGGTACCTGTTTCAGTTTGGGCTCCCA 20912 Query 111405 GAATAGCCTTCCA-AACATCGGCGGCTGGTACAATGGCGT---TGGCCCGTCCCTCCGCC 111460 |||||| | ||| || | | | | | |||| | | | || || Sbjct 20913 AAATAGCATACCACAATTTTTGAGCTTTG----ATGGTCTGTCTACCACGGTTTTCTTTT 20968 Query 111461 TCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCC 111520 ||||| || ||||| | |||| || || ||||| | || | | ||||| ||| Sbjct 20969 TCGTATTTGGTGTATAATTCTTCGAATTCGTCACCATAAACATCAGCCAAGCCTGGGGCC 21028 Query 111521 TTGTCTGGACAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCT 111580 | | ||| |||| | || ||| | |||| || ||||| | |||||||| | ||| Sbjct 21029 TCATTTGGTGAGAATAAAGTCCAGTCACCATTTTGTTCAACTCTTTTCATGAACAAATCT 21088 Query 111581 GGAATCCACAGGGATGAAAAGAGATCTCT-ACACCGAGCCTCTTCGTCACCTTGGTTGAG 111639 |||||||||| | || || | |||||| | | || ||||| | ||| || || Sbjct 21089 GGAATCCACAAAGCTGGGAACAAATCTCTGGCTCTGA-TTTCTTCTTTACCGTGATTCTT 21147 Query 111640 TCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGA---- 111695 || | |||| ||| || | || || ||||||||| || | || | || | Sbjct 21148 TCTAATATCAATGAAATCAAAAATGTCACTGTGCCATGGTTCTAAGTACAAGGCAAAGGC 21207 Query 111696 --TAGATCCCTTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCG 111753 || || ||| | ||| |||| | ||||| || || ||| || ||||| | Sbjct 21208 ACCAGGTCTCTTGTTA---CCACCTTGGTCGACATAACGTGCAGTGTTATTGAATACTCT 21264 Query 111754 AAGCATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGC 111813 | ||||||||||||||||| || |||||| || || ||| || | | Sbjct 21265 TACCATTGGAATAATACCATTAGAAGTACCATTGGTACCAGCAATGTAAGCACCGGTAGA 21324 Query 111814 TCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTC 111873 | | | |||||||| | || || || ||||| | |||||||| |||||| Sbjct 21325 ACGAATGTTGTGGATGTGTAAACCGATTCCTCCAGCACTTTTTGAGATCAAAGCACACGA 21384 Query 111874 CGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACT 111933 | | ||| | || ||||| | || || || ||||| | || | | ||| || Sbjct 21385 TTTCAAAGTGTCGTAAATACCTTCAATAGAATCATCCTTCATAGCAAGCAAGAAACATGA 21444 Query 111934 GGACATCTGCGGTCTTGGTGTACCAGCATTGAA 111966 |||||| || ||||||||||||||||| || || Sbjct 21445 GGACATTTGTGGTCTTGGTGTACCAGCGTTAAA 21477 >seq3714 Length=15575 Score = 132 bits (146), Expect = 6e-26 Identities = 355/533 (67%), Gaps = 31/533 (6%) Strand=Plus/Minus Query 122658 GGCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACC 122717 |||||| || ||| | ||| ||||||| |||| | |||||||||||| | ||| Sbjct 4454 GGCAAAGTCGGTGTGTAAACCTTCATCTCTACAAATCAATTCATTTGAGAAAGTCAAACC 4395 Query 122718 TGGCATGAGACCCCGCTTCTTCAACCAATAAATAGC-GCAGAATGACCCGGAGAAGAAGA 122776 |||||| | ||| | ||| |||||||| |||||| ||| ||||| || |||||||| Sbjct 4394 TGGCATCAAACCTCTCTTTTTCAACCAGAAAATAGAAGCA-AATGAACCACTGAAGAAGA 4336 Query 122777 TACCCTCCACACACGCAAACGCAAAAAGGCGTTCGGCGAAGGAGCGAGACTTTGCATC-- 122834 |||| || ||| ||||| || | | | ||| | | || | | |||| Sbjct 4335 TACCTTCAACAGCAGCAAAAGCTACTAATCTTTCACCATATAAG---GCTTCATCATCTT 4279 Query 122835 -AAACCATTTCATTGCCCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTT 122893 || |||||| || ||||| | || ||||| | ||||||||| | | | ||||| | Sbjct 4278 GAATCCATTTGATAGCCCAATCAGCTTTCTTTTGAATACATGGAATATTAGCAATGGCAT 4219 Query 122894 ----CAAATAA-CTGCTTCTTTTCAGATCCATCCTTAATGTATTTGTCAATCAATTTTGA 122948 ||| ||| | || |||| ||| || || ||| | ||||||||| || Sbjct 4218 TGAACAAGTAATCAGCCTCTT-----GGGGATCTTTGATATATGTTTCAATCAATAAAGA 4164 Query 122949 ATATGTTTCGCCATGAACCATTT-CATTATGGCATTGATATGCGTAGAATGAGCGCGCTT 123007 ||| ||||| ||||| ||| ||| || | ||| | | |||||||| |||| Sbjct 4163 ATAGGTTTCTGAATGAATGTTTTCCATCAT-GATTTGGAAACCATAGAATGATTTGGCTT 4105 Query 123008 CGCTTATCTGAACCTCATCCGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGG 123067 | | ||||| ||| | ||||| | | | | ||| ||| |||||| ||||||| Sbjct 4104 CAGGAAGTTGAACTTCAGTTGAGAAATTTTCAATTAAATTTTCACCAACAATACCATCGG 4045 Query 123068 ACCCAGCAAAGAATGCCAGGATGTACTTT----ATGAATTTCTTTTCATTTTCATTCA-- 123121 | | ||||| ||||||| |||| | || || | ||||||||||||| | Sbjct 4044 AAGCGGCAAAAAATGCCA----ATACTCTAGAAATAAAATATCTTTCATTTTCATTTAAT 3989 Query 123122 -GGGTCTTCCAGTCGTCAAGATCTTTGGACAAATCAACTTCTTCCGCAGTCCA 123173 | | |||||||| || | |||||| |||||||| |||||| |||||||| Sbjct 3988 TTGTTGTTCCAGTCATCCAAATCTTTACTCAAATCAATTTCTTCAGCAGTCCA 3936 >seq4378 Length=39572 Score = 93.3 bits (102), Expect = 5e-14 Identities = 116/159 (73%), Gaps = 0/159 (0%) Strand=Plus/Plus Query 164604 TATGGTCGTGTTGCACCACGATCCGGTCTCGCTGTGAAGCATGGTATTCAAGTTGGTGCG 164663 |||||||||||||| ||||| || || | || ||||| ||||||||| | |||||| Sbjct 26554 TATGGTCGTGTTGCCCCACGTTCGGGATTGGCCGTGAAACATGGTATTTCAACTGGTGCT 26613 Query 164664 GGTGTTATTGATCCCGACTATACAGGTGAAGTCAAAGTCGTTCTCTTCAATCACGGAGAC 164723 ||||| |||||| | || ||| |||||||| ||||| || | || || || | || Sbjct 26614 GGTGTCATTGATGCTGATTATCGTGGTGAAGTGAAAGTAGTCTTATTTAACCATAGTGAA 26673 Query 164724 AAAGACTTTGAGGTAAAGAAAGGGGATCGCATCGCACAA 164762 ||||| || || | || |||| ||| | || || ||| Sbjct 26674 AAAGATTTCGAAATTAAAGAAGGTGATAGAATTGCTCAA 26712 >seq3780 Length=17529 Score = 86.0 bits (94), Expect = 8e-12 Identities = 215/323 (67%), Gaps = 9/323 (3%) Strand=Plus/Plus Query 11537 TCAAAGCCATCCATCTCGGTGAGTAATTGATTAATTGTTTGTTCTCTCTCATCATTTGC- 11595 ||||| || ||||| || | |||||||| | |||| ||| | |||||||| || Sbjct 12968 TCAAACCCGTCCATTTCTACCAACAATTGATTCAATGTTGTTTCACGTTCATCATTGGCA 13027 Query 11596 ----TGGCATACCACCAGCACTGCGTTGCTTGCCCACCGCATCAATCTCATCAATGAAGA 11651 | |||| || | | | ||||| || || | |||||||| ||||||| || | Sbjct 13028 CCGGTAGCATTCCCCTTGGAA--CGTTGTTTACCAATAGCATCAATTTCATCAACAAACA 13085 Query 11652 CAATACATGGTTGATTTTCGCGGGCGATTTCAAAGAGATCGCGAACCCTTTTGGCACCCA 11711 |||| | || |||||| || || ||| ||| | ||| ||||| || ||||| | Sbjct 13086 CAATTGAAGGGGCATTTTCTCGTGCAGTTTTAAACAAATCACGAACTCTAGACGCACCAA 13145 Query 11712 CACCAACAAACATCTCCACAAAGTTTGCGGCAGAGCACTGGAT-GAATGGGACATTTGAT 11770 ||||||||||||| || ||||| | || | || || | || || || || || | Sbjct 13146 CACCAACAAACATTTCAACAAATTCTGAACCGGA-AACAGAATAAAACGGAACCCCTGCT 13204 Query 11771 TCACCCGCGATGGCTCGGGCGAGGAGGGTCTTTCCCGTACCTGGCTTACCCGCGAGAAGG 11830 ||||| || | || ||| || | || || || |||||||| ||| | | || Sbjct 13205 TCACCAGCAGTTGCCTTGGCAAGTAACGTTTTACCAGTACCTGGGGGACCAGATAAAATA 13264 Query 11831 GCGCCTCGGGGGATCTTGGCACC 11853 || || ||||| || || ||||| Sbjct 13265 GCTCCACGGGGAATTTTAGCACC 13287 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627995338632000