Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Naumovozyma_20dairenensis_20[genbank_20GCA_5F001074275.1_202015-07- 10] 4,670 sequences; 13,985,759 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq3780 87.8 2e-12 seq3873 84.2 3e-11 >seq3780 Length=17529 Score = 87.8 bits (96), Expect = 2e-12 Identities = 141/202 (70%), Gaps = 3/202 (1%) Strand=Plus/Plus Query 14148 TATCAAAGCCATCCATCTCAGTCAAGAGTTGATTGATGGTTTGTTCGCGTTCATCATTCG 14207 ||||||| || ||||| || ||| | |||||| | ||| ||| ||||||||||| | Sbjct 12966 TATCAAACCCGTCCATTTCTACCAACAATTGATTCAATGTTGTTTCACGTTCATCATTGG 13025 Query 14208 CAGGCATACCACCCGCACTG---CGTTGCTTACCGACGGCGTCAATTTCATCGATGAAAA 14264 || || || | | || ||||| ||||| | || ||||||||||| | || | Sbjct 13026 CACCGGTAGCATTCCCCTTGGAACGTTGTTTACCAATAGCATCAATTTCATCAACAAACA 13085 Query 14265 CGATACATGGTTGATTTTCACGGGCAACTTCAAAGATATCTCGCACTCTCTTGGCACCGA 14324 | || | || |||||| || ||| || ||| | ||| || ||||| ||||| | Sbjct 13086 CAATTGAAGGGGCATTTTCTCGTGCAGTTTTAAACAAATCACGAACTCTAGACGCACCAA 13145 Query 14325 CACCCACAAACATCTCCACAAA 14346 |||| |||||||| || ||||| Sbjct 13146 CACCAACAAACATTTCAACAAA 13167 >seq3873 Length=5428 Score = 84.2 bits (92), Expect = 3e-11 Identities = 290/450 (64%), Gaps = 8/450 (2%) Strand=Plus/Plus Query 118431 GCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCATTGCCTTGGCCTCG 118490 || || || || || || || || |||||||| || || ||| | || |||||| Sbjct 28 GCTTCAAGTGCAGCATGGTATATAGTTTCAAATATTTGAATATTTAATGTTTTGGCCATT 87 Query 118491 TCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGG 118550 |||||||||| | | || | ||||| || || | |||||| ||||| | Sbjct 88 GCGGAATCAAATGGTAACCGAAGTTCAGCAAATAGGTCTGCCAAACCTTGTACACCTAAA 147 Query 118551 CCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCCACGGGATAAAAATTCCTA 118610 ||||||| || ||||| |||| || | || || || ||||| || | | Sbjct 148 GCAATTGGACGGTGTCTTTTATTTGAGTATTCTGCTGTTTCAACGGGGTATTTTGTTACA 207 Query 118611 TCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAA 118670 || ||||| ||||| | |||| | || | || || |||| || | ||||| || Sbjct 208 TCAATAACTCTATTCAAATTTCTTGTCAACACTTTGGTGACAGAGTGCAATTTTTCAAAA 267 Query 118671 TCAAAACTGCGAGTCTCTTCA------TTGACATACTTAGGAAGGGCGATTGACGCCAGA 118724 ||||| | ||| ||||| || | |||| | || | || | || |||| | Sbjct 268 TCAAATCCAATAGTATCTTCTGTTGTTTTCAAATACGTCGGTAATGCAAGGGATGCCAAA 327 Query 118725 TTACACACAGAGGTCTCATCCTTATCA-GTGTACTCTATAATTTCCGTGCACAAGTTTGA 118783 ||||| |||| ||| || | | | | | || || | ||| || ||||| ||||| Sbjct 328 TTACAGACAGCGGTTTCTTT-TGGTGACGAATATTCAACAATCTCACAACACAAATTTGA 386 Query 118784 ACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAG 118843 | ||| || || || | || ||||| || || ||||||||||| || || ||||| | Sbjct 387 AGACTTTATTGTACCAATATTTTTTTGGTTGGATTTTGTGTTACAGGCGTCTTTGTATAA 446 Query 118844 CATGTATGGCGTCCCCGTCTCCGTTTGGGA 118873 |||||| || || || || ||||| || Sbjct 447 CATGTAGGGGCCACCTGTTTCTGTTTGAGA 476 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618399098845200