Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Naumovozyma_20dairenensis_20[genbank_20GCA_5F001074275.1_202015-07- 10] 4,670 sequences; 13,985,759 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq3929 196 6e-45 seq3714 138 1e-27 seq3873 104 3e-17 >seq3929 Length=34605 Score = 196 bits (216), Expect = 6e-45 Identities = 845/1319 (64%), Gaps = 33/1319 (3%) Strand=Plus/Minus Query 104339 TTCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAG 104398 || || ||||||||||||||||| ||||||||| || ||| | | || | ||||| Sbjct 21477 TTTAACGCTGGTACACCAAGACCACAAATGTCCTCATGTTTCTTGCTTGCTATGAAGGAT 21418 Query 104399 GACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCT 104458 || || || | ||||| || | ||| | | |||||| |||||||| | ||| Sbjct 21417 GATTCTATTGAAGGTATTTACGACACTTTGAAATCGTGTGCTTTGATCTCAAAAAGTGCT 21358 Query 104459 GGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACA 104518 || || || || | |||||||| | | | | | || ||| || || Sbjct 21357 GGAGGAATCGGTTTACACATCCACAACATTCGTTCTACCGGTGCTTACATTGCTGGTACC 21298 Query 104519 AATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTAT 104578 |||||| || ||||||||||||||||| | | ||||| || ||| || || ||| Sbjct 21297 AATGGTACTTCTAATGGTATTATTCCAATGGTAAGAGTATTCAATAACACTGCACGTTAT 21238 Query 104579 GTAAATCAAGCTGGGCGTCGAAAGGGATCTA------TCGCAGTCTATCTTGAGCCATGG 104632 || | |||| ||| | ||| || || | || | || | || |||||| Sbjct 21237 GTCGACCAAGGTGG---TAACAAGAGACCTGGTGCCTTTGCCTTGTACTTAGAACCATGG 21181 Query 104633 CACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGG 104692 ||| || || | || ||| |||| | | || || ||| | || || | | Sbjct 21180 CACAGTGACATTTTTGATTTCATTGATATTAGAAAGAATCACGGTAAAGAAGAAAT-CAG 21122 Query 104693 TGCC-GCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGA 104751 ||| | ||| | ||| | ||| | |||||||||||| | |||||||| |||||||| | Sbjct 21121 AGCCAGAGATTTGTTCCCAGCTTTGTGGATTCCAGATTTGTTCATGAAAAGAGTTGAACA 21062 Query 104752 GAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGG 104811 | ||| | ||| || | || | ||| | |||| || || | | |||| || Sbjct 21061 AAATGGTGACTGGACTTTATTCTCACCAAATGAGGCCCCAGGCTTGGCTGATGTTTATGG 21002 Query 104812 TGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGACGGT 104871 ||| || || |||| | ||||| || ||||| ||||| || | | ||| | Sbjct 21001 TGACGAATTCGAAGAATTATACACCAAATACGAAAAAGAAAACCGTGGTAGACAGACCAT 20942 Query 104872 GCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATA 104931 |||| | ||||| | |||||| | | ||||| || || ||||| |||| Sbjct 20941 CAAAGCTCAAAAATTGTGGTATGCTATTTTGGGAGCCCAAACTGAAACAGGTACCCCATT 20882 Query 104932 CATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAA 104991 ||| | || ||||| | |||||| | || || |||||||| |||||| | ||||| Sbjct 20881 TATGTTATATAAAGATTCATGTAACAACAAATCCAACCAAAAGAACTTGGGTATTATCAA 20822 Query 104992 GAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTG 105051 |||||| | ||| ||||| | |||| | | | |||||| ||||| || Sbjct 20821 ATCTTCCAACTTGTGTTGTGAAATTGTTGAATATTCTGCTCCAGATGAAGTTGCTGTTTG 20762 Query 105052 TAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGA-GACAAAGACATTTGAT- 105109 |||| | || || || || | || | ||| || || || ||| | ||| | Sbjct 20761 TAACTTGGCTTCCATTGCCTTGCCATCATTTGTTGAAAATGATGAAAAAAGTACTTGGTA 20702 Query 105110 ----TATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTAT 105165 | ||| ||| | || | || || || ||||||| ||| | ||||||||||| Sbjct 20701 CAACTTTGACAAATTACATCAGGTCACTAAGGTTGTCACCCGTAACTTGAACAGAGTTAT 20642 Query 105166 TGATAGAAATTTTTACCCCGTTG-AGACTGCTCGTAAATCTAATATGAGACACCGTCCAA 105224 ||| | || |||||| || ||| ||| | ||| || ||||||||| | |||| Sbjct 20641 TGACCGTAACCATTACCCAGTCCCAGAA-GCTGAAAGATCAAACATGAGACACAGACCAA 20583 Query 105225 TTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATTCT-TTGTCGCCACGCATTTGAT 105283 ||| | | |||||||| ||| | || |||| || || ||| || ||||||| Sbjct 20582 TTGCTTTGGGTGTTCAAGGTTTGGCTGATGCCTTTATGGAATTGAGATTAC-CATTTGAC 20524 Query 105284 TCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTT 105343 || | ||||| | ||| | || | || |||||||| || || || || ||| || Sbjct 20523 TCTCAAGAAGCTAGAGAATTGAACATTCAAATTTTTGAGACTATCTACCATGCTGCTGTT 20464 Query 105344 GAGGCGAGTTCA---GAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCT 105400 || || |||| || ||||| | | || ||| | || ||||||| | |||||| Sbjct 20463 GAAGC---TTCAATTGAATTGGCTAAAGAAGAAGGTGCCTACGAAACCTATCCAGGTTCT 20407 Query 105401 CCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCTTCACTA- 105459 ||||| || ||||| | | ||||||||| ||| |||| | ||||| || | || Sbjct 20406 CCAGCCTCTCAAGGTTTATTACAATTTGATTTGT-GGAACAGAAAACCAA-CTGAATTAT 20349 Query 105460 -CGACTGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCA 105518 || ||||| | | || || | | | ||| | | ||| | | Sbjct 20348 GGGATTGGGATACATTAAAACAAGATTTGGCCAAACATGGTATGAGAAACTCCTTGTTGG 20289 Query 105519 TGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAAC 105578 | || |||||||| || || ||||| ||||||| |||||||| |||||||| ||||||| Sbjct 20288 TTGCACCAATGCCTACTGCTTCCACATCACAAATTTTGGGTAACAATGAATGTTTTGAAC 20229 Query 105579 CCTACACGACGAACATCTA-TCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAA 105636 | ||||| | ||||| || ||| |||||| | || ||||| || |||||||| Sbjct 20228 CATACACTTCTAACATTTACTCT-AGAAGAGTATTAGCTGGAGAATTCCAAATTGTCAA 20171 >seq3714 Length=15575 Score = 138 bits (152), Expect = 1e-27 Identities = 531/816 (65%), Gaps = 21/816 (3%) Strand=Plus/Plus Query 94441 TGGACTGCTGAAGAGGTAGATCTCTCAAAGGATTTGGACGATTGGAAGACTC---TAAAT 94497 |||||||||||||| | ||| | || |||||||| || ||||| | ||||| Sbjct 3936 TGGACTGCTGAAGAAATTGATTTGAGTAAAGATTTGGATGACTGGAACAACAAATTAAAT 3995 Query 94498 GAAAATGAAAAGAAATTCATAAAATACA-TCCTGGCATTCTTTGCTGGATCCGATGGAAT 94556 |||||||||| | || || || | | ||||||| ||||| | |||||||| || Sbjct 3996 GAAAATGAAAGATATTTTATTTC-TAGAGTATTGGCATTTTTTGCCGCTTCCGATGGTAT 4054 Query 94557 TGTTTTTGAGAATATCAATAACAACTTTGCTGATGAGGTGCAATCCTCTGAAGCGAGATC 94616 |||| ||| ||| | | | | || || | ||| || ||| ||||||| | ||| Sbjct 4055 TGTTGGTGAAAATTTAATTGAAAATTTCTCAACTGAAGTTCAACTTCCTGAAGCCAAATC 4114 Query 94617 CTTCTATGCGTATCAGTGTCATAATG-AAATGGTGCATGGGGAGACATACAGTAAACTCA 94675 ||||||| || || |||| ||| ||| | ||| || || || | | | | Sbjct 4115 ATTCTATG-GTTTCCAAATCATGATGGAAAACATTCATTCAGAAACCTATTCTTTATTGA 4173 Query 94676 TAGACAAGTATATTAAGGATGGTGCTGAGAAGAAGCAGCTCTTTGAAGCCATC-CAAACA 94734 | || | ||||| || ||| ||| | | | || | ||||| | || | Sbjct 4174 TTGAAACATATATCAAAGATCCCCAAGAGGCTGATTACTTGTTCAATGCCATTGCTAATA 4233 Query 94735 GTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGG-TTTGATACAAAGTCGCG 94793 |||| ||||||||||||||||| ||||||||||| || ||| || | | | | || Sbjct 4234 -TTCCATGTATTCAAAAGAAAGCTGATTGGGCTATCAAATGGATTCAAGATGATGAAGCC 4292 Query 94794 TTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTC 94853 || | || ||| || | | || ||||| |||||| |||||||||||| |||||| Sbjct 4293 TT-ATATGGTGAAAGATTAGTAGCTTTTGCTGCTGTTGAAGGTATCTTCTTCAGTGGTTC 4351 Query 94854 CTTCTGC-GCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCA 94912 || ||| |||||| ||| | || ||| ||||| | ||||||||| | ||||| | Sbjct 4352 ATT-TGCTTCTATTTTCTGGTTGAAAAAGAGAGGTTTGATGCCAGGTTTGACTTTCTCAA 4410 Query 94913 ACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC--GGTGGAACTTTTCAA 94970 | || | || | | | || || || | ||| || ||||| | | | ||| | Sbjct 4411 ATGAATTGATTTGTAGAGATGAAGGTTTACACACCGACTTTGCCTGTTTGTTATTTGCTC 4470 Query 94971 ATTATTGCGTATTAAACCAACGACTGAGACTATTCATTCTATTGTTAAGGAAGCCGTTGA 95030 || |||| | || |||| | | |||| | || | ||| ||| ||||| ||||| Sbjct 4471 AT--TTGCAGAATAGACCATCTCCAGAGATTGTTGAAAGAATTATTACTGAAGCTGTTGA 4528 Query 95031 GATTGAGAAAGGATTCATATTGGATGCCCTTCCATGCGCTCTCATCGGTATGAATTCTGA 95090 |||| |||| || | | ||||| |||||| | | | |||||||| | | | Sbjct 4529 TGTTGAAAAAGAATACTTTACTGATGCTCTTCCAGTGTCATTGTTGGGTATGAACTGTAA 4588 Query 95091 AAAAATGTCTGAATATATTGAGTATGTATCTGATAGATTGTTGAAGCAGATCGGGGTGCC 95150 |||| | |||| ||||| | || |||||||||||||| | | | ||| | Sbjct 4589 CTTGATGTGTCAATACATTGAATTCGTCGCTGATAGATTGTTGTTG--GCTTTAGGTAAC 4646 Query 95151 TCCAA--TTTGGAACTCCAAGAATCCATTTGACTTCATGGAGAACATTAGCCTCGACGGG 95208 || | | || | |||||||| || |||||||| |||||| | | | ||| Sbjct 4647 AAGAAAGTATACAATGTTACTAATCCATTCGATTTCATGGAAAACATTTCCTTGGCCGGT 4706 Query 95209 AAGACAAACTTCTTCGAAAAGAGGGTTGGGGACTAT 95244 ||||| || ||||| ||||| || ||| |||||| Sbjct 4707 AAGACCAATTTCTTTGAAAAAAGAGTTTCAGACTAT 4742 >seq3873 Length=5428 Score = 104 bits (114), Expect = 3e-17 Identities = 248/373 (66%), Gaps = 8/373 (2%) Strand=Plus/Minus Query 104893 AGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATACATGCTTTACAAAGACGCCTG 104952 ||| ||| | | |||||||| || || ||| || |||||| | |||||||||||||| Sbjct 489 AGCCATTTTGCATTCTCAAACAGAAACAGGTGGCCCCTACATGTTATACAAAGACGCCTG 430 Query 104953 TAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAATCTCTGTACAGA 105012 |||| ||| || ||||| ||| | ||| || ||| ||| ||| | ||| || Sbjct 429 TAACACAAAATCCAACCAAAAAAATATTGGTACAATAAAGTCTTCAAATTTGTGTTGTGA 370 Query 105013 AATCTTGGAATTTACAG-ACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTC 105071 || | |||| | | || || | || || ||||| ||||| | ||||| | || Sbjct 369 GATTGTTGAATATTCGTCACCAAAA-GAAACCGCTGTCTGTAATTTGGCATCCCTTGCAT 311 Query 105072 TCCCCAAGTATGTGGATCCA------GAGACAAAGACATTTGATTATGAAAAACTCCACG 105125 | || | |||| || | || || || | |||||||| ||||||| | ||| Sbjct 310 TACCGACGTATTTGAAAACAACAGAAGATACTATTGGATTTGATTTTGAAAAATTGCACT 251 Query 105126 AAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCG 105185 || || ||| | || | ||| | || |||||||||||| || ||||||| Sbjct 250 CTGTCACCAAAGTGTTGACAAGAAATTTGAATAGAGTTATTGATGTAACAAAATACCCCG 191 Query 105186 TTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTCGGTGTTCAGGGTC 105245 |||| || || | || |||| |||||||||||||||| | | ||||| || ||| Sbjct 190 TTGAAACAGCAGAATACTCAAATAAAAGACACCGTCCAATTGCTTTAGGTGTACAAGGTT 131 Query 105246 TCGCGGATGTATT 105258 | || || |||| Sbjct 130 TGGCAGACCTATT 118 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583226752150800