Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ogataea_20methanolica_20[genbank_20GCA_5F001600755.1_202016-03-01] 32 sequences; 15,086,366 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq1 118 8e-22 >seq1 Length=3681944 Score = 118 bits (130), Expect = 8e-22 Identities = 403/623 (65%), Gaps = 55/623 (9%) Strand=Plus/Plus Query 101677 TTTAAGAGCATCAATGTGATCTACATAGATGTGAGCATCTCCTATAGTATGGATAAACTC 101736 ||| || ||||| | ||||| ||| | ||||| ||| || |||||||| || ||||| Sbjct 404057 TTTCAGGGCATCGACATGATCGCAATAAACGTGAGAATCACCCATAGTATGAATGAACTC 404116 Query 101737 TCCAGGCACTAGATTAGTGACATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAAT 101796 | |||| | | || | |||||| ||||||||| || | || | || || || Sbjct 404117 TGCAGGTTCCATATCAACGACATGGGCAATCATGATGGTGAGTAGTGCGTATGAGGCGAT 404176 Query 101797 GTTAAATGGCACTCCTAACCCCATATCAGCTGATCTTTGATACA-GTTGACAGGAAAGCT 101855 ||| || || || ||||| ||||||||| ||||||||||||| | || || || || | Sbjct 404177 GTTGAAAGGAACGCCTAATCCCATATCACACGATCTTTGATACATGATG-CACGATAGTT 404235 Query 101856 TT---------------CCATC------------------ACAGACATAAAATTGACTTA 101882 || ||||| ||| |||||||||| | Sbjct 404236 TTGGTTTATTAGCTGTGCCATCTTCGTTATCTTTCGGGAAGTTGACGTAAAATTGACAGA 404295 Query 101883 ATACATGACAAGGCGGCAACACCATTT-TAGGAATGTCTGAAACATTCCAAGCACACATT 101941 | || ||||| || || || |||||| | ||| | | | |||||| |||| ||| Sbjct 404296 AAACGTGACAGGGAGGTAATGCCATTTGTTTGAAAG-CCGGCGGATTCCAGGCACTCATG 404354 Query 101942 AACATCCTTCTATCTGTA-GGGTTTGTTTTTATAGTATCAATCAACTGTTTTAATTGGTC 102000 | || ||||| || ||| |||||||| |||| | |||| || | ||| || Sbjct 404355 ATGATTCTTCTGTC-GTATGGGTTTGTCTTTAAGGAGGTTATCACTTGAGCGAGTTGATC 404413 Query 102001 AACTCCTTCTCCTTTATA------ATCGCGCCCAACACCTTTATATTCTGCTCCGAAATG 102054 | |||| ||| |||| ||||| |||| || ||||| || ||||| Sbjct 404414 GAAACCTTTACCTGTATAATCTGTATCGCAGTCAAC------GTAGTCTGCACCAAAATG 404467 Query 102055 CCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTTCATCT-CTGTCATAAAAACCAA 102113 ||||| || || |||||||| || ||||| || ||||| ||| || || | ||||| Sbjct 404468 TCTCCATTGGAAACCATACACTGGGCCAAGGTCACCTTC-TCTCCTATCTGTTAGACCAA 404526 Query 102114 GTTTATCTAAAAATGATCTAGATCCATTCGCATCCCAAATGTGCACGCCAGCTGCTGATA 102173 || ||||||| || ||||||||| || | ||||| || | ||||| | | | || Sbjct 404527 GTGAATCTAAATATTCTCTAGATCCGTTACCTTCCCAGATCTTGACGCCCTTTTCGGTTA 404586 Query 102174 G-CTCTTTGCTGTCAGTAGATCCTCTGATAAACCACAACAGTTCTTCAACAACACCTCTC 102232 | |||| || || ||| | ||| || |||||| | |||||| | | || ||| | Sbjct 404587 GTTTCTTAGC-ATCTGTACACCCTTGGACAAACCAGAGCAGTTCATGTAAAATGCCTTTA 404645 Query 102233 CAAAATACTCTCTTAGTAGTTAA 102255 |||| || | ||||| ||||| Sbjct 404646 AAAAAGACACGTTTAGTGGTTAA 404668 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361251059112032