Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ogataea_20methanolica_20[genbank_20GCA_5F001600755.1_202016-03-01]
32 sequences; 15,086,366 total letters
Query= NC_001962.1
Length=128413
Score E
Sequences producing significant alignments: (Bits) Value
seq1 107 2e-18
seq2 96.9 3e-15
>seq1
Length=3681944
Score = 107 bits (118), Expect = 2e-18
Identities = 161/229 (70%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 25033 AAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCG 25092
|||||||||| ||| | ||||| || || || || ||||| || || ||| ||
Sbjct 1219340 AAATGCAAATTTTCGTTAAAACCTTAACTGGTAAGACCATCACTTTAGAGGTCGAATCCT 1219281
Query 25093 CAGAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATC 25152
|||| || | | | || ||||| || || || || |||||| | || ||||
Sbjct 1219280 CAGACACCATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCTGATC 1219221
Query 25153 AACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACA 25212
|||||||| | |||||||| || || |||||||||||| | ||| | | || ||||
Sbjct 1219220 AACAAAGATTAATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACCTTATCTGACTACA 1219161
Query 25213 ATATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261
| |||||||||||||| || | ||| | || ||| ||||| |||| ||
Sbjct 1219160 ACATTCAAAAGGAATCCACCTTGCACTTAGTCTTAAGATTAAGAGGTGG 1219112
>seq2
Length=3419278
Score = 96.9 bits (106), Expect = 3e-15
Identities = 161/233 (69%), Gaps = 0/233 (0%)
Strand=Plus/Minus
Query 25029 GTAAAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAA 25088
|| || |||||||| ||| | ||||| || || || || ||||| || || |||
Sbjct 1617324 GTCAAGATGCAAATTTTCGTTAAAACCTTAACTGGTAAGACCATCACTTTAGAGGTCGAA 1617265
Query 25089 CCCGCAGAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTA 25148
| | || || | | | | | ||| ||| || ||||| |||||| | ||
Sbjct 1617264 TCATCCGACACTATTGACAACGTTAAGTCAAAGATCCAAGATAAGGAAGGTATCCCACCT 1617205
Query 25149 GATCAACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGAT 25208
|||||||| ||| | |||||||| || || ||||| |||||| | |||| | ||||
Sbjct 1617204 GATCAACAGAGATTAATCTTTGCTGGTAAGCAATTAGAAGATGGTAGAACTTTATCCGAC 1617145
Query 25209 TACAATATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261
||||| || ||||||||||| ||| | ||| |||| || ||||| |||| ||
Sbjct 1617144 TACAACATCCAAAAGGAATCAACTTTACACTTGGTCTTGAGATTAAGAGGTGG 1617092
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 410796639789248
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |