Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ogataea_20methanolica_20[genbank_20GCA_5F001600755.1_202016-03-01] 32 sequences; 15,086,366 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq1 136 3e-27 >seq1 Length=3681944 Score = 136 bits (150), Expect = 3e-27 Identities = 452/701 (64%), Gaps = 43/701 (6%) Strand=Plus/Plus Query 96963 TTTAAAATCATCAATAGATGCAATCTTTCTGGCAAACTTTAGTGTTGGGAAAGGCCTGGG 97022 ||| |||||||||||| ||||| ||| | | | ||| | |||||||| || || Sbjct 403979 TTTGAAATCATCAATATTTGCAACCTTACGTCCTATCTTCAAACTTGGGAAATCTCTAGG 404038 Query 97023 AGTTCGCGTAAGCTGCTCTGTGAGAGCATCAATGTGATTCACATAAATGTGAGCATCTCC 97082 | || | |||||| | || ||||| | |||| ||||| ||||| ||| || Sbjct 404039 AACTCTTTGCATTTGCTCTTTCAGGGCATCGACATGATCGCAATAAACGTGAGAATCACC 404098 Query 97083 TAAAGTGTGAATAAATTCTCCAGGAACTAAATCAGTGACATGGGCGATCATACAAGTTAA 97142 | ||| ||||| || ||| |||| | | |||| ||||||||| ||||| || | Sbjct 404099 CATAGTATGAATGAACTCTGCAGGTTCCATATCAACGACATGGGCAATCATGATGGTGAG 404158 Query 97143 TAGAGAATAGCTAGCAATGTTAAAAGGCACCCCTAGTCCCATATCAGCTGATCTTTGATA 97202 ||| | || || ||||| ||||| || |||| |||||||||| ||||||||||| Sbjct 404159 TAGTGCGTATGAGGCGATGTTGAAAGGAACGCCTAATCCCATATCACACGATCTTTGATA 404218 Query 97203 TAACTGA--CAGGAAAGCTTT---------------CCATC------------------A 97227 | ||| || || || ||| ||||| Sbjct 404219 CA--TGATGCACGATAGTTTTGGTTTATTAGCTGTGCCATCTTCGTTATCTTTCGGGAAG 404276 Query 97228 CACACATAAAACTGACTCAATACATGACAGGGGGGCAACGCCATTT-TTGGAACATCTAA 97286 || ||||| |||| || || |||||||| || || ||||||| || ||| | | Sbjct 404277 TTGACGTAAAATTGACAGAAAACGTGACAGGGAGGTAATGCCATTTGTTTGAA-AGCCGG 404335 Query 97287 GACATTCCAAGCACACATCAACATTCTTCTATCGGTTGGGTTTGTGTGTATGGTATTAAT 97346 |||||| |||| ||| | |||||||| ||| ||||||||| | || || | || Sbjct 404336 CGGATTCCAGGCACTCATGATGATTCTTCTGTCGTATGGGTTTGTCTTTAAGGAGGTTAT 404395 Query 97347 TATCTGCTTTAATTGATCAACGCCTTCTCCACCATAAT-TGTGCTTAAGACCTTGATATT 97405 | || | |||||| | |||| || ||||| ||| || | | || | Sbjct 404396 CACTTGAGCGAGTTGATCGAAACCTTTACCTGTATAATCTGTATCGCAGTCAACG-TAGT 404454 Query 97406 CTGCTCCAAAATGCCTCCATTGGAATCCATAAACAGGTCCAAGGTCTCCTTCTTCTCTAT 97465 |||| |||||||| ||||||||||| ||||| || || |||||||| |||||| |||| Sbjct 404455 CTGCACCAAAATGTCTCCATTGGAAACCATACACTGGGCCAAGGTCACCTTCTCTCCTAT 404514 Query 97466 CACAGAAACCAAGCTTATCTAAATAGGACCTAGATCCATTTGCATCCCAAATGTGCACAC 97525 | | |||||| ||||||||| |||||||| || | ||||| || | || | Sbjct 404515 CTGTTAGACCAAGTGAATCTAAATATTCTCTAGATCCGTTACCTTCCCAGATCTTGACGC 404574 Query 97526 CAGATGCTGCAAG-CTCTTTGCTGTCAGTAGATCCTCTGATAAACCACAACAATTCTTCC 97584 | | | | || |||| || || ||| | ||| || |||||| | || ||| | Sbjct 404575 CCTTTTCGGTTAGTTTCTTAGC-ATCTGTACACCCTTGGACAAACCAGAGCAGTTCATGT 404633 Query 97585 ACAACACCTCTCCAAAATACTCTCTTAGTTGTTAAGAGAGG 97625 | || ||| | |||| || | ||||| ||||| | ||| Sbjct 404634 AAAATGCCTTTAAAAAAGACACGTTTAGTGGTTAACAAAGG 404674 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346783864754240