Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ogataea_20methanolica_20[genbank_20GCA_5F001600755.1_202016-03-01]
32 sequences; 15,086,366 total letters
Query= NC_001993.1
Length=236120
Score E
Sequences producing significant alignments: (Bits) Value
seq2 143 4e-29
seq1 131 3e-25
seq9 118 2e-21
>seq2
Length=3419278
Score = 143 bits (158), Expect = 4e-29
Identities = 173/233 (74%), Gaps = 2/233 (1%)
Strand=Plus/Minus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598
|||||||| || | || || |||| || || || || ||| ||||| | ||| ||
Sbjct 1617318 ATGCAAATTTTCGTTAAAACCTTAACTGGTAAGACCATCACTTTAGAGGTCGAATCATCC 1617259
Query 124599 GATACAATTTCTAAT-TTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657
|| || ||| || |||| || || || |||||||| |||||||| |||||||||||
Sbjct 1617258 GACACTATTGACAACGTTAAGTCA-AAGATCCAAGATAAGGAAGGTATCCCACCTGATCA 1617200
Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717
||| || | || ||||| || || |||||||| ||| || |||| ||| || || ||
Sbjct 1617199 ACAGAGATTAATCTTTGCTGGTAAGCAATTAGAAGATGGTAGAACTTTATCCGACTACAA 1617140
Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTA 124770
|| ||||| ||||||||||| || ||||| || | ||| ||||||||||||
Sbjct 1617139 CATCCAAAAGGAATCAACTTTACACTTGGTCTTGAGATTAAGAGGTGGTATTA 1617087
>seq1
Length=3681944
Score = 131 bits (144), Expect = 3e-25
Identities = 171/237 (72%), Gaps = 0/237 (0%)
Strand=Plus/Minus
Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597
||||||||| || | || || |||| || || || || ||| ||||| | ||| |
Sbjct 1219339 AATGCAAATTTTCGTTAAAACCTTAACTGGTAAGACCATCACTTTAGAGGTCGAATCCTC 1219280
Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657
|| || ||| ||| | || || || ||||| || |||||||| |||||||||||
Sbjct 1219279 AGACACCATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCTGATCA 1219220
Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717
|||||| | || ||||| || || ||||| || ||| || |||| ||| || || ||
Sbjct 1219219 ACAAAGATTAATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACCTTATCTGACTACAA 1219160
Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAAAA 124774
|||||||| ||||| || ||||| || || ||| | ||| |||||||| ||| ||
Sbjct 1219159 CATTCAAAAGGAATCCACCTTGCACTTAGTCTTAAGATTAAGAGGTGGTGGTAAGAA 1219103
Score = 89.7 bits (98), Expect = 8e-13
Identities = 115/159 (72%), Gaps = 0/159 (0%)
Strand=Plus/Plus
Query 205689 TTGATCAAATCCTTGATTTGTATAATTTGTATCCATATCAATATATTTAGCACCAAAATG 205748
|||||| || |||| | |||||||| |||||| |||| || | |||||||||||
Sbjct 404408 TTGATCGAAACCTTTACCTGTATAATCTGTATCGCAGTCAACGTAGTCTGCACCAAAATG 404467
Query 205749 ACGCCATTGAAAACCATAAACTGGACCTAAATCACCTTCTTTTCTATCATTAAAACCACG 205808
| |||||| |||||||| ||||| || | ||||||||| | ||||| | | |||| |
Sbjct 404468 TCTCCATTGGAAACCATACACTGGGCCAAGGTCACCTTCTCTCCTATCTGTTAGACCAAG 404527
Query 205809 tttttttATATATTTTAATGATCCATTTTCATCCCAAAT 205847
| | || ||||| | ||||| || | ||||| ||
Sbjct 404528 TGAATCTAAATATTCTCTAGATCCGTTACCTTCCCAGAT 404566
>seq9
Length=470967
Score = 118 bits (130), Expect = 2e-21
Identities = 127/168 (76%), Gaps = 0/168 (0%)
Strand=Plus/Minus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598
|||||||| || | || || |||| || || || || || ||||| ||||| |
Sbjct 292509 ATGCAAATTTTCGTTAAAACTTTAACTGGTAAGACCATCACCTTAGAGGTTGAATCTTCC 292450
Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658
||||| ||| |||| | || |||||| |||||||| |||||||| ||||||||||||
Sbjct 292449 GATACTATTGATAATGTGAAGTCGAAAATCCAAGATAAGGAAGGTATTCCACCTGATCAA 292390
Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTA 124706
||||| | || ||||| || ||||||||||| || || ||||||||
Sbjct 292389 CAAAGATTAATCTTTGCTGGTAAACAATTAGAAGACGGTAGAACATTA 292342
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 755455697817600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |