Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ogataea_20methanolica_20[genbank_20GCA_5F001600755.1_202016-03-01] 32 sequences; 15,086,366 total letters Query= NC_002642.1 Length=144575 Score E Sequences producing significant alignments: (Bits) Value seq5 271 7e-68 >seq5 Length=1013952 Score = 271 bits (300), Expect = 7e-68 Identities = 591/876 (67%), Gaps = 14/876 (2%) Strand=Plus/Minus Query 15959 ACTCTCTTTTCAAAGAAATTTGTTTTTCCTTCTAATGAAATATTTTCCATAAAATCAAAA 16018 ||||||||||||||||| || || || || |||| ||||||||||||||||| || || Sbjct 647992 ACTCTCTTTTCAAAGAAGTTGGTCTTACCAGCTAAAGAAATATTTTCCATAAAGTCGAAT 647933 Query 16019 GGATTTTTTGAACAAT--AGTATTTATCGCATCCCAATTCCAACAATAATCTATCCGCCA 16076 || || || ||| | ||| || | ||| || || || ||||||||||| || | Sbjct 647932 GGGTTGTT--AACCTTGTAGTGCTTCTTGCAACCTAAAGATAATAATAATCTATCAGCAA 647875 Query 16077 CAAATTCTATATACTGTTTCATTAAATCACAGTTCATTCCTATTAATTTAACAGGGATTG 16136 |||| || | || || ||| || || |||||| || | |||| | || | | Sbjct 647874 CAAACTCAACGTATTGGCACATCAATTCTGCGTTCATACCCAATAATGCACATGGTAAGG 647815 Query 16137 CTTCTGTTAAAAAAtttttttCTATATTAACCGCTTCAATGATTATATCTCTTACTACAC 16196 | || || || | | ||||| || | ||| |||||| | || || | | || ||| Sbjct 647814 CATCCGTGAAGTATCTCTTTTCAATGTCAACTGCTTCAGTAATAATCT---TGACAACAA 647758 Query 16197 TAT-TTAAC--GGAGGGTTTAATAAGTGTTTAAACATTATACAAGCAAAATCACAATGCA 16253 | | || | |||| ||| | ||| || | || ||||||||||||| || | Sbjct 647757 TTTCTTCATTTGGAGTGTTGTTCATGTGAGAGAATAATAAACAAGCAAAATCAGTGTGTA 647698 Query 16254 ATCCTTCGTCCCTACTTATTAACTCGTTTGAAAATGTAAGACCTGGCATTAGTCCTCGTT 16313 | ||||| || |||| || || || || || || || | || |||||||| |||| | Sbjct 647697 AACCTTCATCTCTACAAATCAATTCATTAGAGAAAGTTAAGCCCGGCATTAGGCCTCTCT 647638 Query 16314 TTTTAATCCAAAATATAGCGGCAAATGAACCAGAAAAGAATATACCTTCAACTGCGGCAA 16373 |||| | |||||| |||| |||||||||||||| ||||| |||||||| || || |||| Sbjct 647637 TTTTCAACCAAAAGATAGAAGCAAATGAACCAGAGAAGAAGATACCTTCGACAGCAGCAA 647578 Query 16374 ATGCAACCAATCGCTCACCGTACGTTCTAtttttactttctatccattttttagcccaat 16433 | ||||| |||| || || | | ||||| | | |||||| | | ||||| | Sbjct 647577 AGGCAACTAATCTTTCGGCGAATAAGCCATTTTCGTTGTTCATCCATCTCATGGCCCAGT 647518 Query 16434 ttgctttttgtttAACACAGTTCATGTTCTCTATTGCATTAAATAAATAAtttttttCTT 16493 || |||| || | || || |||| || ||||| ||||| | | || | Sbjct 647517 CAGCCTTTTCCTTGATGCAAGGAATAGTCTCAATAGCATTGAATAAGAAGTCAGCCTCCT 647458 Query 16494 TGCTATCTAAAATATAAGTATCTATTAGTAAACTATACATTTCTGAATGAATATTCTCCA 16553 | ||| || ||| || || || | ||| || |||| || || || || |||| Sbjct 647457 TTGGATCCTTAACATAGGTGTCGATCAATAATGAGTAAGTTTCAGAGTGGATGTTTTCCA 647398 Query 16554 TTGCTATCTGAAAACCATAAAAGCATCTAGCTTCGGATATTTGTACTTCAGAGTAAAACC 16613 | ||||| ||||| || || || | ||||| | ||||| ||||| | |||| Sbjct 647397 TCATGATCTGGAAACCGTAGAAACACTTGGCTTCTGGAATTTGGACTTCGGCAGAAAAGT 647338 Query 16614 TTTCTGCTAAGTTTTCGTTAACTATTCCATCGCTAGCTGCAAAAAACGCAAGTATGTGTT 16673 |||| | ||||| |||||||| || || ||| |||||||| || || | | | Sbjct 647337 TTTCAACCAAGTTCTCGTTAACAATACCGTCGGAGGCTGCAAAGAAAGCTAAAACTCTTG 647278 Query 16674 TAATAAAAtttttttCGTTATC--TGAAAGT-TTTAACCAGTCAGAAAAATCTTTTGATA 16730 ||| ||| | ||||| | || | || | || ||||||| | ||| ||||||| Sbjct 647277 AAATGAAAAATCTTTCGCTTTCATTTAATCTGTTGTTCCAGTCATGAGTATCCTTTGATA 647218 Query 16731 AATCGACCTCTTCTACAGTCCAAAAAGAAGCAACAGCCTTTTTATACATTTTCCATATGT 16790 |||| | |||||| ||||||| |||||||| ||||||| || ||||||| ||| || | Sbjct 647217 AATCAATTTCTTCTGCAGTCCAGAAAGAAGCTTCAGCCTTCTTGTACATTTGCCAGATTT 647158 Query 16791 CTTCGTAAACAATAGGAAACACAACATA-CTTATTT 16825 | | ||| ||| || |||| |||| | ||| ||| Sbjct 647157 CATGGTATTTAATTGGGAACAAAACAAATCTTTTTT 647122 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462511814995200