Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ogataea_20methanolica_20[genbank_20GCA_5F001600755.1_202016-03-01]
32 sequences; 15,086,366 total letters
Query= NC_002642.1
Length=144575
Score E
Sequences producing significant alignments: (Bits) Value
seq5 271 7e-68
>seq5
Length=1013952
Score = 271 bits (300), Expect = 7e-68
Identities = 591/876 (67%), Gaps = 14/876 (2%)
Strand=Plus/Minus
Query 15959 ACTCTCTTTTCAAAGAAATTTGTTTTTCCTTCTAATGAAATATTTTCCATAAAATCAAAA 16018
||||||||||||||||| || || || || |||| ||||||||||||||||| || ||
Sbjct 647992 ACTCTCTTTTCAAAGAAGTTGGTCTTACCAGCTAAAGAAATATTTTCCATAAAGTCGAAT 647933
Query 16019 GGATTTTTTGAACAAT--AGTATTTATCGCATCCCAATTCCAACAATAATCTATCCGCCA 16076
|| || || ||| | ||| || | ||| || || || ||||||||||| || |
Sbjct 647932 GGGTTGTT--AACCTTGTAGTGCTTCTTGCAACCTAAAGATAATAATAATCTATCAGCAA 647875
Query 16077 CAAATTCTATATACTGTTTCATTAAATCACAGTTCATTCCTATTAATTTAACAGGGATTG 16136
|||| || | || || ||| || || |||||| || | |||| | || | |
Sbjct 647874 CAAACTCAACGTATTGGCACATCAATTCTGCGTTCATACCCAATAATGCACATGGTAAGG 647815
Query 16137 CTTCTGTTAAAAAAtttttttCTATATTAACCGCTTCAATGATTATATCTCTTACTACAC 16196
| || || || | | ||||| || | ||| |||||| | || || | | || |||
Sbjct 647814 CATCCGTGAAGTATCTCTTTTCAATGTCAACTGCTTCAGTAATAATCT---TGACAACAA 647758
Query 16197 TAT-TTAAC--GGAGGGTTTAATAAGTGTTTAAACATTATACAAGCAAAATCACAATGCA 16253
| | || | |||| ||| | ||| || | || ||||||||||||| || |
Sbjct 647757 TTTCTTCATTTGGAGTGTTGTTCATGTGAGAGAATAATAAACAAGCAAAATCAGTGTGTA 647698
Query 16254 ATCCTTCGTCCCTACTTATTAACTCGTTTGAAAATGTAAGACCTGGCATTAGTCCTCGTT 16313
| ||||| || |||| || || || || || || || | || |||||||| |||| |
Sbjct 647697 AACCTTCATCTCTACAAATCAATTCATTAGAGAAAGTTAAGCCCGGCATTAGGCCTCTCT 647638
Query 16314 TTTTAATCCAAAATATAGCGGCAAATGAACCAGAAAAGAATATACCTTCAACTGCGGCAA 16373
|||| | |||||| |||| |||||||||||||| ||||| |||||||| || || ||||
Sbjct 647637 TTTTCAACCAAAAGATAGAAGCAAATGAACCAGAGAAGAAGATACCTTCGACAGCAGCAA 647578
Query 16374 ATGCAACCAATCGCTCACCGTACGTTCTAtttttactttctatccattttttagcccaat 16433
| ||||| |||| || || | | ||||| | | |||||| | | ||||| |
Sbjct 647577 AGGCAACTAATCTTTCGGCGAATAAGCCATTTTCGTTGTTCATCCATCTCATGGCCCAGT 647518
Query 16434 ttgctttttgtttAACACAGTTCATGTTCTCTATTGCATTAAATAAATAAtttttttCTT 16493
|| |||| || | || || |||| || ||||| ||||| | | || |
Sbjct 647517 CAGCCTTTTCCTTGATGCAAGGAATAGTCTCAATAGCATTGAATAAGAAGTCAGCCTCCT 647458
Query 16494 TGCTATCTAAAATATAAGTATCTATTAGTAAACTATACATTTCTGAATGAATATTCTCCA 16553
| ||| || ||| || || || | ||| || |||| || || || || ||||
Sbjct 647457 TTGGATCCTTAACATAGGTGTCGATCAATAATGAGTAAGTTTCAGAGTGGATGTTTTCCA 647398
Query 16554 TTGCTATCTGAAAACCATAAAAGCATCTAGCTTCGGATATTTGTACTTCAGAGTAAAACC 16613
| ||||| ||||| || || || | ||||| | ||||| ||||| | ||||
Sbjct 647397 TCATGATCTGGAAACCGTAGAAACACTTGGCTTCTGGAATTTGGACTTCGGCAGAAAAGT 647338
Query 16614 TTTCTGCTAAGTTTTCGTTAACTATTCCATCGCTAGCTGCAAAAAACGCAAGTATGTGTT 16673
|||| | ||||| |||||||| || || ||| |||||||| || || | | |
Sbjct 647337 TTTCAACCAAGTTCTCGTTAACAATACCGTCGGAGGCTGCAAAGAAAGCTAAAACTCTTG 647278
Query 16674 TAATAAAAtttttttCGTTATC--TGAAAGT-TTTAACCAGTCAGAAAAATCTTTTGATA 16730
||| ||| | ||||| | || | || | || ||||||| | ||| |||||||
Sbjct 647277 AAATGAAAAATCTTTCGCTTTCATTTAATCTGTTGTTCCAGTCATGAGTATCCTTTGATA 647218
Query 16731 AATCGACCTCTTCTACAGTCCAAAAAGAAGCAACAGCCTTTTTATACATTTTCCATATGT 16790
|||| | |||||| ||||||| |||||||| ||||||| || ||||||| ||| || |
Sbjct 647217 AATCAATTTCTTCTGCAGTCCAGAAAGAAGCTTCAGCCTTCTTGTACATTTGCCAGATTT 647158
Query 16791 CTTCGTAAACAATAGGAAACACAACATA-CTTATTT 16825
| | ||| ||| || |||| |||| | ||| |||
Sbjct 647157 CATGGTATTTAATTGGGAACAAAACAAATCTTTTTT 647122
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462511814995200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |