Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ogataea_20methanolica_20[genbank_20GCA_5F001600755.1_202016-03-01]
32 sequences; 15,086,366 total letters
Query= NC_002686.2
Length=124784
Score E
Sequences producing significant alignments: (Bits) Value
seq1 89.7 4e-13
>seq1
Length=3681944
Score = 89.7 bits (98), Expect = 4e-13
Identities = 261/397 (66%), Gaps = 4/397 (1%)
Strand=Plus/Minus
Query 20047 CCCTTATTAACTACGAAACGGGTATTTTGGAAAGGCGTTGTTGAAGAGTTATTATGGTTT 20106
|| || ||||| || ||||| || |||| |||||| || | | || | | ||||||
Sbjct 404674 CCTTTGTTAACCACTAAACGTGTCTTTTTTAAAGGCATTTTACATGAACTGCTCTGGTTT 404615
Query 20107 ATTAAAGGATCAACAAATTCTACCGAGCTTGTAGAAAAAGGAGTTAAGATTTGGAGCGCA 20166
| |||| | ||| || ||| | || ||||| || || ||||| ||| |
Sbjct 404614 GTCCAAGGGTGTACAGATGCTAAGAAACTAACCGAAAAGGGCGTCAAGATCTGGGAAGGT 404555
Query 20167 CATGGATCTAAGCAATTTTTACACAGCAATGGATTTGACA-ACCGTCAAGAGGGGGATTT 20225
| ||||||| ||| |||| | || | | | | ||| | | ||| || || |
Sbjct 404554 AACGGATCTAGAGAATATTTAGATT-CACTTGGTCTAACAGATAGGAGAGAAGGTGACCT 404496
Query 20226 GGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATATGTTGACATGAACAC 20285
|| || |||||||| || ||||||||||||||||| || || || |||||| | ||
Sbjct 404495 TGGCCCAGTGTATGGTTTCCAATGGAGACATTTTGGTGCAGACTACGTTGACTGCGATAC 404436
Query 20286 AAATTATTTTGGACAAGGAGTAGATCAATTACAAAATGTTATTAATTTAATTAAA-ACGA 20344
| ||||| || |||| | |||||| | | || | ||| | ||||| || |
Sbjct 404435 AGATTATACAGGTAAAGGTTTCGATCAACTCGCTCAAGTGA-TAACCTCCTTAAAGACAA 404377
Query 20345 ACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTAAAGATGTGCCTTTAATGG 20404
||||| ||||||||||||| || | | |||||||| | | | | |||||
Sbjct 404376 ACCCATACGACAGAAGAATCATCATGAGTGCCTGGAATCCGCCGGCTTTCAAACAAATGG 404317
Query 20405 CTTTGCCTCCATGTCATATGCTATGCCAATTTTACGT 20441
| || ||||| ||||| | | || |||||||||||
Sbjct 404316 CATTACCTCCCTGTCACGTTTTCTGTCAATTTTACGT 404280
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 399183844318240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |