Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ogataea_20methanolica_20[genbank_20GCA_5F001600755.1_202016-03-01] 32 sequences; 15,086,366 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq5 248 8e-61 >seq5 Length=1013952 Score = 248 bits (274), Expect = 8e-61 Identities = 594/880 (68%), Gaps = 29/880 (3%) Strand=Plus/Minus Query 13928 ACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTTTCCATAAAATCAAAT 13987 ||||| |||||||||||||| || ||||| | | || |||||||||||||| || ||| Sbjct 647992 ACTCTCTTTTCAAAGAAGTTGGTCTTACCAGCTAAAGAAATATTTTCCATAAAGTCGAAT 647933 Query 13988 GGATTTGTTGACATAA-ACACTTTATCACAACCTAGTTCTAATAGTAATCTATCCGCAAT 14046 || || ||| || | | || | ||||||| ||||| ||||||||| |||| Sbjct 647932 GGGTT-GTTAACCTTGTAGTGCTTCTTGCAACCTAAAGATAATAATAATCTATCAGCAAC 647874 Query 14047 GAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAGTTTTACA-GGAATTA 14105 ||||||| ||||| |||| || || |||||||| | || | ||| || | Sbjct 647873 AAACTCAACGTATTGGCACATCAATTCTGCGTTCATACCCAATAATGC-ACATGGTAAGG 647815 Query 14106 TATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCGTTTATAATAATCGTAATAATTT 14165 || || || || ||||| || || || || | ||||| | || ||||| Sbjct 647814 CATCCGTGAAGTATCTCTTTTCAATGTCAACTGCTTCAGTAATAATCTTGACAACAATTT 647755 Query 14166 CATTAGAAGGAGGATATTTTAGATGTTTAAAAAT--TAAACACGCAAAATCACAATGAAG 14223 | | | |||| | || | |||| | ||| |||||| ||||||||| || | Sbjct 647754 CTTCATTTGGAG--TGTTGTTCATGTGAGAGAATAATAAACAAGCAAAATCAGTGTGTAA 647697 Query 14224 GCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGttt 14283 || |||||||||| ||| | ||| || || || ||||| || ||||| | |||| || Sbjct 647696 ACCTTCATCTCTACAAATCAATTCATTAGAGAAAGTTAAGCCCGGCATTAGGCCTCTCTT 647637 Query 14284 ttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAA 14343 ||| |||||||| || | ||| ||||| || || ||||| || || || || |||||||| Sbjct 647636 TTTCAACCAAAAGATAGAAGCAAATGAACCAGAGAAGAAGATACCTTCGACAGCAGCAAA 647577 Query 14344 CGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGATATCCATTTTCTAGCCCATTC 14403 || | ||||| ||| | || | | |||| ||| |||||| | | ||||| || Sbjct 647576 GGCAACTAATCTTTCGGCGAATAAGCCATTTTCGTTGTTCATCCATCTCATGGCCCAGTC 647517 Query 14404 AGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAAATGTTCCTTCTCTTT 14463 || |||| || || || || || ||||||||||| ||||| || ||| || Sbjct 647516 AGCCTTTTCCTTGATGCAAGGAATAGTCTCAATAGCATTGAATAAGAAGTCAGCCTCCTT 647457 Query 14464 AG--TACTTGAAAT--GTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTT 14519 | | ||| | || || | |||||||| | || || |||||||||| ||||||| Sbjct 647456 TGGATCCTTAACATAGGTGTCGATCAATAA-TGAG---TAAGTTTCAGAGTGGATGTTTT 647401 Query 14520 CCATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCATTGTACCTCTGAGTAAA 14579 |||| ||||| ||||| || ||||| | ||||||| ||| || || | ||| Sbjct 647400 CCATCATGATCTGGAAACCGTAGAAACACTTGGCTTCTGGAATTTGGACTTCGGCAGAAA 647341 Query 14580 ATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGCAAAAAATGCCAATATGT 14639 | |||| |||| || || ||||| ||||| || |||||||| || || || | Sbjct 647340 AGTTTTCAACCAAGTTCTCGTTAACAATACCGTCGGAGGCTGCAAAGAAAGCTAAAACTC 647281 Query 14640 TTTTAAT--AAAGTATTGCTC-TTCATT---GCTGAGTTTTTTCCAATCGGCTAAATCCT 14693 || ||| ||| | || | | |||||| ||| || ||||| || ||||| Sbjct 647280 TTGAAATGAAAAATCTTTCGCTTTCATTTAATCTG---TTGTTCCAGTCATGAGTATCCT 647224 Query 14694 TAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCAACAGCTTTTTTATACATTACCC 14753 | || | ||| | ||| || | ||||| ||| ||| |||| || || |||||| || Sbjct 647223 TTGATAAATCAATTTCTTCTGCAGTCCAGAAAGAAGCTTCAGCCTTCTTGTACATTTGCC 647164 Query 14754 ATATTTCTT--TATATAATATAGGAAAAACTACAAATCTT 14791 | ||||| | ||| |||| | |||| || ||||||||| Sbjct 647163 AGATTTCATGGTATTTAAT-TGGGAACAA-AACAAATCTT 647126 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482345407061760