Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ogataea_20methanolica_20[genbank_20GCA_5F001600755.1_202016-03-01]
32 sequences; 15,086,366 total letters
Query= NC_003027.1
Length=150773
Score E
Sequences producing significant alignments: (Bits) Value
seq5 248 8e-61
>seq5
Length=1013952
Score = 248 bits (274), Expect = 8e-61
Identities = 594/880 (68%), Gaps = 29/880 (3%)
Strand=Plus/Minus
Query 13928 ACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTTTCCATAAAATCAAAT 13987
||||| |||||||||||||| || ||||| | | || |||||||||||||| || |||
Sbjct 647992 ACTCTCTTTTCAAAGAAGTTGGTCTTACCAGCTAAAGAAATATTTTCCATAAAGTCGAAT 647933
Query 13988 GGATTTGTTGACATAA-ACACTTTATCACAACCTAGTTCTAATAGTAATCTATCCGCAAT 14046
|| || ||| || | | || | ||||||| ||||| ||||||||| ||||
Sbjct 647932 GGGTT-GTTAACCTTGTAGTGCTTCTTGCAACCTAAAGATAATAATAATCTATCAGCAAC 647874
Query 14047 GAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAGTTTTACA-GGAATTA 14105
||||||| ||||| |||| || || |||||||| | || | ||| || |
Sbjct 647873 AAACTCAACGTATTGGCACATCAATTCTGCGTTCATACCCAATAATGC-ACATGGTAAGG 647815
Query 14106 TATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCGTTTATAATAATCGTAATAATTT 14165
|| || || || ||||| || || || || | ||||| | || |||||
Sbjct 647814 CATCCGTGAAGTATCTCTTTTCAATGTCAACTGCTTCAGTAATAATCTTGACAACAATTT 647755
Query 14166 CATTAGAAGGAGGATATTTTAGATGTTTAAAAAT--TAAACACGCAAAATCACAATGAAG 14223
| | | |||| | || | |||| | ||| |||||| ||||||||| || |
Sbjct 647754 CTTCATTTGGAG--TGTTGTTCATGTGAGAGAATAATAAACAAGCAAAATCAGTGTGTAA 647697
Query 14224 GCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGttt 14283
|| |||||||||| ||| | ||| || || || ||||| || ||||| | |||| ||
Sbjct 647696 ACCTTCATCTCTACAAATCAATTCATTAGAGAAAGTTAAGCCCGGCATTAGGCCTCTCTT 647637
Query 14284 ttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAA 14343
||| |||||||| || | ||| ||||| || || ||||| || || || || ||||||||
Sbjct 647636 TTTCAACCAAAAGATAGAAGCAAATGAACCAGAGAAGAAGATACCTTCGACAGCAGCAAA 647577
Query 14344 CGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGATATCCATTTTCTAGCCCATTC 14403
|| | ||||| ||| | || | | |||| ||| |||||| | | ||||| ||
Sbjct 647576 GGCAACTAATCTTTCGGCGAATAAGCCATTTTCGTTGTTCATCCATCTCATGGCCCAGTC 647517
Query 14404 AGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAAATGTTCCTTCTCTTT 14463
|| |||| || || || || || ||||||||||| ||||| || ||| ||
Sbjct 647516 AGCCTTTTCCTTGATGCAAGGAATAGTCTCAATAGCATTGAATAAGAAGTCAGCCTCCTT 647457
Query 14464 AG--TACTTGAAAT--GTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTT 14519
| | ||| | || || | |||||||| | || || |||||||||| |||||||
Sbjct 647456 TGGATCCTTAACATAGGTGTCGATCAATAA-TGAG---TAAGTTTCAGAGTGGATGTTTT 647401
Query 14520 CCATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCATTGTACCTCTGAGTAAA 14579
|||| ||||| ||||| || ||||| | ||||||| ||| || || | |||
Sbjct 647400 CCATCATGATCTGGAAACCGTAGAAACACTTGGCTTCTGGAATTTGGACTTCGGCAGAAA 647341
Query 14580 ATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGCAAAAAATGCCAATATGT 14639
| |||| |||| || || ||||| ||||| || |||||||| || || || |
Sbjct 647340 AGTTTTCAACCAAGTTCTCGTTAACAATACCGTCGGAGGCTGCAAAGAAAGCTAAAACTC 647281
Query 14640 TTTTAAT--AAAGTATTGCTC-TTCATT---GCTGAGTTTTTTCCAATCGGCTAAATCCT 14693
|| ||| ||| | || | | |||||| ||| || ||||| || |||||
Sbjct 647280 TTGAAATGAAAAATCTTTCGCTTTCATTTAATCTG---TTGTTCCAGTCATGAGTATCCT 647224
Query 14694 TAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCAACAGCTTTTTTATACATTACCC 14753
| || | ||| | ||| || | ||||| ||| ||| |||| || || |||||| ||
Sbjct 647223 TTGATAAATCAATTTCTTCTGCAGTCCAGAAAGAAGCTTCAGCCTTCTTGTACATTTGCC 647164
Query 14754 ATATTTCTT--TATATAATATAGGAAAAACTACAAATCTT 14791
| ||||| | ||| |||| | |||| || |||||||||
Sbjct 647163 AGATTTCATGGTATTTAAT-TGGGAACAA-AACAAATCTT 647126
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 482345407061760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |