Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ogataea_20methanolica_20[genbank_20GCA_5F001600755.1_202016-03-01] 32 sequences; 15,086,366 total letters Query= NC_003083.1 Length=118584 Score E Sequences producing significant alignments: (Bits) Value seq2 104 2e-17 seq1 102 6e-17 >seq2 Length=3419278 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158 || || | || ||| | |||| ||| | |||||||| ||||| ||||||||||||| Sbjct 1617092 CCACCTCTTAATCTCAAGACCAAGTGTAAAGTTGATTCCTTTTGGATGTTGTAGTCGGAT 1617151 Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218 | ||| ||| |||||| ||||| || || ||| |||| | ||| |||||||| || Sbjct 1617152 AAAGTTCTACCATCTTCTAATTGCTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGG 1617211 Query 18219 ACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTT 18278 | ||||||||||| || | | ||| || | ||| |||||| | ||| Sbjct 1617212 ATACCTTCCTTATCTTGGATCTTTGACTTAACGTTGTCAATAGTGTCGGATGATTCGACC 1617271 Query 18279 TCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCATTTT 18328 || | |||||| | || || || || ||||| || ||||||||||| || Sbjct 1617272 TCTAAAGTGATGGTCTTACCAGTTAAGGTTTTAACGAAAATTTGCATCTT 1617321 >seq1 Length=3681944 Score = 102 bits (112), Expect = 6e-17 Identities = 142/199 (71%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 18129 GTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAATTGTTTGCCC 18188 || ||||| ||||||||||||||||| | | ||| ||| |||||||||||| || || Sbjct 1219142 GTGGATTCCTTTTGAATGTTGTAGTCAGATAAGGTTCTACCATCTTCCAATTGCTTACCA 1219201 Query 18189 GCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCAATTTGTTGCTTG 18248 ||| |||| | |||||||||||| || | |||||||| || || | |||| Sbjct 1219202 GCAAAGATTAATCTTTGTTGATCAGGTGGAATACCTTCCTTGTCTTGGATCTTGGACTTG 1219261 Query 18249 ACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTGCCGGTCAATGTT 18308 || | ||| ||||| || ||| || | |||||| | || || || || ||| Sbjct 1219262 ACATTGTCAATGGTGTCTGAGGATTCGACCTCTAAAGTGATGGTCTTACCAGTTAAGGTT 1219321 Query 18309 TTTACAAAAATTTGCATTT 18327 || || ||||||||||||| Sbjct 1219322 TTAACGAAAATTTGCATTT 1219340 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 379343852055840