Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ogataea_20methanolica_20[genbank_20GCA_5F001600755.1_202016-03-01]
32 sequences; 15,086,366 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq5 210 2e-49
seq9 84.2 2e-11
seq2 84.2 2e-11
>seq5
Length=1013952
Score = 210 bits (232), Expect = 2e-49
Identities = 1184/1867 (63%), Gaps = 76/1867 (4%)
Strand=Plus/Plus
Query 22154 TAATACATGCCCGTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCGACGTCAATTTT 22213
|| ||||| || ||||||| |||| ||||||| |||| || || || ||||| || ||
Sbjct 376760 TAGTACATACCAGTCTTCAAACCCTTCTTCCAACCGTAGAAGTGCATGGACGTTAACTTA 376819
Query 22214 CC-ATAACTCGGC-----AAGTCCATGTACACATTGAACGACTGACTCTGATCGATAAAC 22267
|| ||| | || |||| |||| || |||| || || | |||| || |
Sbjct 376820 CCCATAGTTGGGTTCTTTAAGTGAATGTTCA--TTGATTGA--GATT--GATCAATGTAA 376873
Query 22268 GCTCCTCGATCGGCGGCCATATTTATCAATGTACGCATC-GACATTTCCCATACGGTCTT 22326
|| |||| ||| || ||||||| || |||| | | || |||||||| || |||||
Sbjct 376874 GCACCTCTATCAGCAGCCATATCAAT-AATGCTCTTTTGTGAAATTTCCCAGACTGTCTT 376932
Query 22327 GTACAGTTGCCTGATCTCTAACGGTATCGATTCGATCC--TCTGGACGGACCCGTTATTG 22384
||| | || | | | || || || |||| | | || | || || ||||
Sbjct 376933 GTATAATTTCTTTAATTCGTCTGGAATG--TTCGGTAAGTTTTGAATAGAGCCATTATCT 376990
Query 22385 TGTATGATCAAATTTTTAATCGTATCGTTCCACAAACCGATGGCGGTCAAATCTTTGACC 22444
|| ||||| ||||| || || | |||| |||| | ||| | | |||||| | | |
Sbjct 376991 TGAATGATGAAATTCTTCATAGCATCGCTCCATAGACCTAAATCAACTAAATCTCTTAGC 377050
Query 22445 AGATGACGGTTCACCACTTGAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGAT 22504
| || |||| || | ||| || || || | | || | | | ||||||||| ||
Sbjct 377051 AAATATGGGTTGACAATTTGGAATTCACCTGCTAGAACTCTTCTTGAGTAAATGTTAGAA 377110
Query 22505 GTGAACGGTTCGAAAGATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATC 22564
||| | |||||||| | || |||| |||| || || | || ||||| || |||||
Sbjct 377111 GTGTATGGTTCGAAGCACTCGTTGTAACCCAAAATTTGTGAAGTTGAAGCAGTAGGCATT 377170
Query 22565 GGCGCCAACAGTAGCGAGTTTCTCAAGCCGTGCTTTGAAATTTTACTCTTGAGCATCGA- 22623
|| |||| || || ||||||||||| |||||||| |||||| | ||| | || ||
Sbjct 377171 GGAGCCAGCAATAAAGAGTTTCTCAAACCGTGCTTGGAAATTCTTTCCTTTA--ATAGAT 377228
Query 22624 -CCAGTCCCACAGATCGGACGGCGTCACATTGTCCCACATATCGTATTGCAACACGCCGC 22682
||| ||||| | ||| | ||| || || |||| | ||| |||| || | ||
Sbjct 377229 CCCAATCCCATAAATCAGTTGGCTTC---TTACCCCATAAGTCGAATTGTAATAGACCTT 377285
Query 22683 GACTCGCCGGGCTGCCTTCGTACGTTTCGTACGGACCATATATCGCGG-CAAGT---TCG 22738
|| || || |||| | | | || || || |||| || | ||| | |||
Sbjct 377286 GAGAAGCTGGAGAACCTTGGAAATTCTCATATGGCCCATCTAAGATTGACAATTCAATCG 377345
Query 22739 CAGCTCGCCTCCAACGCGCCGTAATATATAGTCTCGAAGATTTTCTTGTTCAATTCGGCG 22798
|||| || || || | | || || || || || |||| ||||||| || |
Sbjct 377346 AAGCT----TCTAAAGCAGCATGGTACATGGTTTCAAAAATTTGAATGTTCAAGTCCCTG 377401
Query 22799 GCGGCGACGCTTTCGTACGGCATACGCATCATCACGAACGCGTCCGCCATACCCTGAACG 22858
|| | | || | || | | || || ||| |||| |||| ||| |||||
Sbjct 377402 GCCTCTGGGGAATCAAATGGTAATCTCAATTGCATGAAAACGTCAGCCAAACCTTGAACA 377461
Query 22859 CCTATACCGATCGGTCGGTTTTTCAGATTCGACACTTTTGCCTCGGGCAAAGGATACCAA 22918
|| | | | || |||| |||||||| || || | | ||||| | ||| || |
Sbjct 377462 CCAACAGCAATTGGTCTGTTTTTCATGTTAGATGTTCTAGCCTCTTCAACAGGGTAATAG 377521
Query 22919 TTCGAATCGATTGTTCTGTTCAAGTTTCTGGTCACAATTTTCGTTATNNNNNNNNNNNNN 22978
|| || || | |||||||||| | | |||| || || |
Sbjct 377522 TTTCTGTCAATGATCATGTTCAAGTTCTTAGCAACAACCTTAGTAACTTCATGCAGTTTT 377581
Query 22979 TCAAAGTCGTAA-------ACGC-----CCGATTGTACAACAAACTTGTTGACG--GCGA 23024
||||||| || || | |||||| | || || || | | || |
Sbjct 377582 TCAAAGTTATACCATGATGACTCTGAATCCGATT---CGACGAA--TGCAGGCAAAGCCA 377636
Query 23025 TCGAGGCAAGATTGCATACGGCCACCTCGTCTTTGGACGTGTACTCTACAATTTCG--GT 23082
|| || || || || ||||| || || ||| || | || || |||||||| |
Sbjct 377637 CGGAAGCTAGGTTACAGACGGCAACTTCTTCTGGTGAGGAATATTCAACAATTTCACAGC 377696
Query 23083 ACATAGATTGCTACACTTTATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGA 23142
||| || | | | |||| || || ||||| || | |||||| |||| ||| || |
Sbjct 377697 ACA-AGTTAGATG-ACTTAATAGTACCCAAGTTCTTTTGGTTGGATTTTTCATTACAAGC 377754
Query 23143 ATCCTTGTAGAGCATGTACGGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCA 23202
||||||||| | ||| | || ||||| || || || | || | || || |||
Sbjct 377755 ATCCTTGTATAACATAAATGGAGTGCCTGTTTCCGTTTGTGCTTCTAAAATAGCATACCA 377814
Query 23203 CATAGTCTGAGCGTGAACACGTCGCACGTACCT--GCCTTCTTCCTCGTACTTTTGGTAC 23260
| | ||||| | ||| | | ||||| ||||||||| || || |||||||
Sbjct 377815 TAGCTTTTGAGCCTTGACAGTTTGTC--TACCTCTGCCTTCTTCTTCATA--TTTGGTAT 377870
Query 23261 A--ACGCGTCAAATTCGGCACCGTAACAGTCGGCCAGGCCGGGCGATT--GCATCGGACA 23316
| | || |||||||| |||||||| ||| | || || | || | | ||| |
Sbjct 377871 ATAAAGCTTCAAATTCATCACCGTAAAGTTCGTGTAAACCAGGGGCTTCGGAAGGGGAGA 377930
Query 23317 CATGAGACTCCACATTGAGTCATTTT---CAACGCGTCTCATAAAAAGATCCGGTATCCA 23373
|| | | |||| ||||| |||| | |||| | ||||||| | ||| || |||||
Sbjct 377931 -ATAA-AGTCCA--TTGAG-CATTCTGCTCAACTCTCTTCATAAACAAATCTGGAATCCA 377985
Query 23374 TAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATC 23433
|| || ||| || || | || | | ||| || || ||| |||||| | | |||
Sbjct 377986 TAAGGCCGGGAATAGATCTCTAGCTCTGATCTCTTCCTTACCGTGATTCTTTCTAATATC 378045
Query 23434 CAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCT 23493
| || || || | || | |||||| || || | ||| | || || || || |||||
Sbjct 378046 GATGAAATCAAAGATATCAGAATGCCATGGTTCAATGTATAAAGCGAAAGCACCTGGTCT 378105
Query 23494 CTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCAC 23553
|| || || ||||| || || || | || ||||||||| | ||||| | ||| || |
Sbjct 378106 TTTGTTACCCCCCTGGTCAACATATCTTGCAGTGTTGTTGAAAACTCTAATCATTGGAAT 378165
Query 23554 GAGACCGTTGGACGCGCCGCCTACGCCCGCCACACTCGAACCTTTTGCTCGAACGTTGTG 23613
|| |||||| || | || || || | | ||||| | | || || ||| ||
Sbjct 378166 GATACCGTTAGAAGTACCATTAGTACCGGCAATATATGAACCAGTAGATCTAATGTTATG 378225
Query 23614 AACGTGGAAACCTATGCCTCCGCCCGATTTCGATATCATCGCGCATTGTTTCAGAGTGTC 23673
|| ||| ||||| || || || | | || || |||| || ||||| |||| ||| ||
Sbjct 378226 AATGTGTAAACCAATACCACCAGCAGTCTTGGAAATCAAAGCACATTGCTTCAAAGTATC 378285
Query 23674 GTAGATGCCCTCGATGCTGTCCTCTTTGGTCGCGACCAAGAAACACGAAGACATTTGCGC 23733
|| || || ||||| || ||||| | || || || || || ||||||||||| ||
Sbjct 378286 ATAAATACCATCGATAGAATCGTCTTTCATAGCAACTAAAAAGCATGAAGACATTTGTGC 378345
Query 23734 TTTGGGCGTAGCGGCCGAGAACAGTGTCGGGCTGGCGTGCGTAAAGTATCCATTCGACAT 23793
| || ||| | || || | ||| || ||||| |||||||||| | |||||
Sbjct 378346 GTGAGGAGTACCAGCATTAAATAATGTTGGTGAAGCGTGAGTAAAGTATCTTTCTGACAT 378405
Query 23794 -TAGATTGTACGTGTCGATGGCGGCATCAATGTCCTCTCCGTGTATACCGATGGCGACGC 23852
||| || || || || ||| | | |||| | || ||||| ||||| || | || |
Sbjct 378406 GTAG-TTATAAGTTTCTATGACCTTAGCAATATTATCACCGTGGATACCAATAGAAACTC 378464
Query 23853 GCATCATCATGTATTGAGGTCTCTCGACCGTGACGCCGTTAATTTTGAACAGATATGAAC 23912
||| | | || || ||||| || | | ||||||||| | || | |||||| |
Sbjct 378465 TCATAACTAAGTGCTGTGGTCTTTCAGCAACAGCACCGTTAATTCTCAATAAATATGATC 378524
Query 23913 GTTGCATCGTTTTAAATCCAAAATAGTCATAGTTAAAGTCACGATCGTGCACTATGGCCG 23972
| || || ||||| || ||||||| ||| || ||||| |||| || || || |
Sbjct 378525 TCTCCAAAGTCTTAAAACCGAAATAGTTGTAGGAGAAATCACGGTCGTAAACAATAGCAG 378584
Query 23973 AATTCAA 23979
|||||||
Sbjct 378585 AATTCAA 378591
Score = 179 bits (198), Expect = 3e-40
Identities = 582/892 (65%), Gaps = 25/892 (3%)
Strand=Plus/Plus
Query 57537 AGATTTGTCATGTTTCCGATTGAATATCCAGACATTTGGAACATGTACAAAAAGGCAGAA 57596
|||||||| |||| || ||| |||| | || || ||| | |||||||| ||||| |||
Sbjct 647127 AGATTTGTTTTGTTCCCAATTAAATACCATGAAATCTGGCAAATGTACAAGAAGGCTGAA 647186
Query 57597 GCATCGTTTTGGACCGTCGAAGAAGTAGACCTGTCTAAGGAT-CTGAGCGATTGGGATTC 57655
|| || || ||||| | |||||| | || | || |||||| || | || ||| |
Sbjct 647187 GCTTCTTTCTGGACTGCAGAAGAAATTGATTTATCAAAGGATACTCAT-GACTGGAACAA 647245
Query 57656 CC---TCAAAGAATCTGAGAGAAATTTTATTAAACACGTGTTGGCGTTTTTCGCCGCATC 57712
| | || ||| || ||| ||| ||| | || || || || || || || ||
Sbjct 647246 CAGATTAAATGAAAGCGAAAGATTTTTCATTTCAAGAGTTTTAGCTTTCTTTGCAGCCTC 647305
Query 57713 CGATGGTATTGTTAACGAGAATTTGGTCGAAAGATTTTCACAAGAAGTGCAAGTGACGGA 57772
||| ||||||||||||||||| ||||| |||| ||||| ||||| ||| | | ||
Sbjct 647306 CGACGGTATTGTTAACGAGAACTTGGTTGAAAACTTTTCTGCCGAAGTCCAAATTCCAGA 647365
Query 57773 GGCGAGATGCTTTTACGGATTTCAAGTGGCCATTGAAAACGTGCATTCAGAAATGTATTC 57832
|| | || || ||||| || || | || |||||| | || || |||| || ||
Sbjct 647366 AGCCAAGTGTTTCTACGGTTTCCAGATCATGATGGAAAACATCCACTCTGAAACTTACTC 647425
Query 57833 GCTACTCATCGATACGTACGTGAAGGA--CAACGACGAGAAACGTAGACTG----TTCAA 57886
|| | ||||| || || || ||||| ||| | ||| | |||| |||||
Sbjct 647426 ATTATTGATCGACACCTATGTTAAGGATCCAAAG--GAG----GCTGACTTCTTATTCAA 647479
Query 57887 CGCGATCGAAACAATGCCCGCGATCGCCAAGAAGGCAGAGTGGTCAATCAAATGGATAAA 57946
|| || || || || || ||| | ||||| || ||| | || | |||||| ||
Sbjct 647480 TGCTATTGAGACTATTCCTTGCATCAAGGAAAAGGCTGACTGGGCCATGAGATGGATGAA 647539
Query 57947 AAGCGCCACGGCCACGTTCGCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTATATT 58006
| || | | | |||||||| || || | || || || || ||||||||||| ||
Sbjct 647540 CAACGAAAATGGCTTATTCGCCGAAAGATTAGTTGCCTTTGCTGCTGTCGAAGGTATCTT 647599
Query 58007 CTTTTCGGGCAGCTTTGCGGCAATATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCT 58066
||| || || ||||| | || |||||| |||| || | ||||| ||||| ||| |
Sbjct 647600 CTTCTCTGGTTCATTTGCTTCTATCTTTTGGTTGAAAAAGAGAGGCCTAATGCCGGGCTT 647659
Query 58067 GACGTTTAGCAACGAGTTGATATCGCGCGACGAGGGTCTCCATACTGATTTTGCGTGCCT 58126
|| || || || ||||| | | || || ||| | || ||||||||||| || |
Sbjct 647660 AACTTTCTCTAATGAATTGATTTGTAGAGATGAAGGTTTACACACTGATTTTGCTTGTTT 647719
Query 58127 AATGTACTCTCACATTGTCAATAAACCGACGCGGGATCGCATCTTGGACATTATCACCGA 58186
| | | ||||||||| ||| | || | || | | | ||||| || ||
Sbjct 647720 ATTATTCTCTCACATGAACAACACTCCAAATGAAGAAATTGTTGTCAAGATTATTACTGA 647779
Query 58187 GGCGGTCGCGATCGAAAATGAG-TTTGTCACCGAAGCCCTACCGGTGGCCATGCTCGGTA 58245
|| || | || ||||| ||| | |||| || ||| |||| || | | ||||
Sbjct 647780 AGCAGTTGACATTGAAAA-GAGATACTTCACGGATGCCTTACCATGTGCATTATTGGGTA 647838
Query 58246 TGAACAATGATTTGATGTCAAAGTACATTGAGTTTGTTGCCGACAGACTTTTGCTCGAAC 58305
||||| || ||||||| | ||| ||||||||||||| || ||| | || | | |
Sbjct 647839 TGAACGCAGAATTGATGTGCCAATACGTTGAGTTTGTTGCTGATAGATTATTATT--ATC 647896
Query 58306 T---GATTGGAGAGCGTCATTACAACACGAAAAATCCGTTTGATTTTATGAATCTGATCT 58362
| | ||| | || || ||||| || || || || || |||||| | || |
Sbjct 647897 TTTAGGTTGCA-AGAAGCACTACAAGGTTAACAACCCATTCGACTTTATGGAAAATATTT 647955
Query 58363 CGCTCGAGGGCAAGACAAACTTTTTCGaaaaaaaaGTTAGCGAATATCAAAA 58414
| | | || ||||| ||||| || ||||| | ||| ||| || |||||
Sbjct 647956 CTTTAGCTGGTAAGACCAACTTCTTTGAAAAGAGAGTGTCCGACTACCAAAA 648007
>seq9
Length=470967
Score = 84.2 bits (92), Expect = 2e-11
Identities = 115/161 (71%), Gaps = 0/161 (0%)
Strand=Plus/Minus
Query 31188 CAAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAAC 31247
||||||||||||||||||| || ||| | || || || || |||||| | || ||||||
Sbjct 292514 CAAACATGCAAATTTTCGTTAAAACTTTAACTGGTAAGACCATCACCTTAGAGGTTGAAT 292455
Query 31248 CGTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCG 31307
| ||||| | | | || | || || || ||| || |||||||| | || || |
Sbjct 292454 CTTCCGATACTATTGATAATGTGAAGTCGAAAATCCAAGATAAGGAAGGTATTCCACCTG 292395
Query 31308 ACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGAC 31348
| || || | |||| || ||||| ||||| || ||||||
Sbjct 292394 ATCAACAAAGATTAATCTTTGCTGGTAAACAATTAGAAGAC 292354
>seq2
Length=3419278
Score = 84.2 bits (92), Expect = 2e-11
Identities = 160/233 (69%), Gaps = 2/233 (1%)
Strand=Plus/Minus
Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249
|| |||||||||||||| || || | || || || || ||||| | || || ||| |
Sbjct 1617321 AAGATGCAAATTTTCGTTAAAACCTTAACTGGTAAGACCATCACTTTAGAGGTCGAATCA 1617262
Query 31250 TCCGACAGTGTCGA-AACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGA 31308
||||||| | | || |||| | | || || || || |||||||| | || || ||
Sbjct 1617261 TCCGACACTATTGACAACGTTAAGTCAAAG-ATCCAAGATAAGGAAGGTATCCCACCTGA 1617203
Query 31309 CCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTA 31368
|| ||| | |||| || ||||| || || || ||||| || ||| | ||| ||
Sbjct 1617202 TCAACAGAGATTAATCTTTGCTGGTAAGCAATTAGAAGATGGTAGAACTTTATCCGACTA 1617143
Query 31369 TAACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
||||| ||||| ||||| ||| | || |||| | ||| | || || ||||
Sbjct 1617142 CAACATCCAAAAGGAATCAACTTTACACTTGGTCTTGAGATTAAGAGGTGGTA 1617090
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445766221693440
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