Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ogataea_20methanolica_20[genbank_20GCA_5F001600755.1_202016-03-01]
32 sequences; 15,086,366 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq5 129 1e-24
>seq5
Length=1013952
Score = 129 bits (142), Expect = 1e-24
Identities = 340/513 (66%), Gaps = 16/513 (3%)
Strand=Plus/Plus
Query 101851 CATCAAGAAGAAGGAGCAGTGGGCTATTAATTGGATGCAAAGCAATAACGATTTG---GC 101907
||||||| | |||| | ||||| || | |||||| | | | | || | || ||
Sbjct 647501 CATCAAGGAAAAGGCTGACTGGGCCATGAGATGGATGAACAACGAAAATGGCTTATTCGC 647560
Query 101908 GGAACTAATTGTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATC 101967
||| | | |||||||||||||| || ||||| |||||||| |||| |||| || ||
Sbjct 647561 CGAAAGATTAGTTGCCTTTGCTGCTGTCGAAGGTATCTTCTTCTCTGGTTCATTTGCTTC 647620
Query 101968 CATTTTCTGGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCAT 102027
|| || ||| | || || || || | |||| || | || | ||| ||||| || ||
Sbjct 647621 TATCTTTTGGTTGAAAAAGAGAGGCCTAATGCCGGGCTTAACTTTCTCTAATGAATTGAT 647680
Query 102028 TTCTAGGGACGAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGT 102087
|| ||| || |||||| | || || ||||| || | | || | |
Sbjct 647681 TTGTAGAGATGAAGGTTTACACACTGATTTTGCTTGTTTATTATTCTCTCACA------T 647734
Query 102088 TGATACCCCATCAAGAGAAAGGATTCTTG---AAATTGTCACTGAAGCCGTCCGAATTGA 102144
| | | | ||| ||| ||| ||| | ||| | |||||||| || |||||
Sbjct 647735 GAACAACACTCCAAATGAAGAAATTGTTGTCAAGATTATTACTGAAGCAGTTGACATTGA 647794
Query 102145 ACAAGAATTTCT-CACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCA-AGTTG 102202
| |||| | || ||| | | || | || | |||| |||| |||||| ||| | |||
Sbjct 647795 A-AAGAGATACTTCACGGATGCCTTACCATGTGCATTATTGGGTATGAAC-GCAGAATTG 647852
Query 102203 ATGAGCCAGTACATTGAATTTGTGGCAGATAAACTATTGGTTGAAATGGGACTAGAAAAG 102262
||| |||| ||| |||| ||||| || |||| | |||| | | || | |||
Sbjct 647853 ATGTGCCAATACGTTGAGTTTGTTGCTGATAGATTATTATTATCTTTAGGTTGCAAGAAG 647912
Query 102263 CACTATAATGTTACCAACCCCTTCCCATTCATGGACAATATTTCCCTCGAGAATAAGACC 102322
||||| || |||| |||||| ||| || ||||| |||||||| | | |||||||
Sbjct 647913 CACTACAAGGTTAACAACCCATTCGACTTTATGGAAAATATTTCTTTAGCTGGTAAGACC 647972
Query 102323 AACTTTTTTGAAAAGAGAGTCGCCGAGTATCAA 102355
||||| |||||||||||||| |||| || |||
Sbjct 647973 AACTTCTTTGAAAAGAGAGTGTCCGACTACCAA 648005
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989583594270560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |