Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ogataea_20methanolica_20[genbank_20GCA_5F001600755.1_202016-03-01]
32 sequences; 15,086,366 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq5 452 5e-122
>seq5
Length=1013952
Score = 452 bits (500), Expect = 5e-122
Identities = 1414/2157 (66%), Gaps = 89/2157 (4%)
Strand=Plus/Plus
Query 62046 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 62105
||||||||||| | ||| || || | || || | || |||||||| || || || | |
Sbjct 376721 GTGAATTGAATAGCAGCAGAAGCAGCTTGTGTTCTTAAGTAGTACATACCAGTCTTCAAA 376780
Query 62106 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGA-ATAACTCGGATCTGCTAT 62164
|| |||| ||||| || ||||| ||||| || ||| | || ||| ||
Sbjct 376781 CCCTTCTTCCAACCGTAGAAGTGCATGGACGTTAACTTACCCATAGTTGGGTTCTT-TAA 376839
Query 62165 ATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTAT 62224
|| || ||||| |||||| |||||| ||| | || || || || |||||||| | ||
Sbjct 376840 GTGAATGTTCATTGATTGAGATTGATCAATGTAAGCACCTCTATCAGCAGCCATATCAAT 376899
Query 62225 GATCGTCTTTTGTGCAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAG 62284
|| ||||||||| ||||||||| | || || || | | ||| | || |||||||
Sbjct 376900 AATGCTCTTTTGTGAAATTTCCCAGACTGTCTTGTATAATTTCTTTAATTCGTCTGGAAT 376959
Query 62285 GTTTG-TA--TTCTGAATGGATCCACCATCTACCATAATCCTATTCTTGATCTCATCATT 62341
||| | || || ||||| || ||| |||| || || |||||| || |||| |
Sbjct 376960 GTTCGGTAAGTTTTGAATAGAGCCATTATCTTGAATGATGAAATTCTTCATAGCATCGCT 377019
Query 62342 CCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGGTTAACTACTTGGAATTCTCC 62401
||||| | || |||| |||| || | || ||||| || | ||||||||| ||
Sbjct 377020 CCATAGACCTAAATCAACTAAATCTCTTAGCAAATATGGGTTGACAATTTGGAATTCACC 377079
Query 62402 AGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACTCATTATTTCC 62461
| | ||||| | | |||||| ||| || || ||||| | |||| || | ||
Sbjct 377080 TGCTAGAACTCTTCTTGAGTAAATGTTAGAAGTGTATGGTTCGAAGCACTCGTTGTAACC 377139
Query 62462 CAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACC 62521
||||||||| | |||||| ||||| ||||| || |||| ||||||| ||||| | |||
Sbjct 377140 CAAAATTTGTGAAGTTGAAGCAGTAGGCATTGGAGCCAGCAATAAAGAGTTTCTCAAACC 377199
Query 62522 GTATGTTCTGATTTTATCTTTTAGATGTTCCCAATTCCAAAGATCCGACGG-----TACA 62576
|| | ||| | || |||| | ||||||| ||| | ||| | || |||
Sbjct 377200 GTGCTTGGAAATTCTTTCCTTTAATAGATCCCAATCCCATAAATCAGTTGGCTTCTTACC 377259
Query 62577 ACANNNNNNNNNNNATATTGTAGAATACCGTTA----CTGGCGTACGATCCTACATATGT 62632
|| |||||| | ||| | | |||| | || | | | || |
Sbjct 377260 CCATAAGTCGA-----ATTGTAATAGACCTTGAGAAGCTGGAGAAC---CTTGGAAAT-T 377310
Query 62633 ATCATATGGTCCTTCCTTCTCAGCTAGTTTACAACTC-------GCCTCTAATGCACCGT 62685
|||||||| || || | || | | |||| || || ||||| ||| | |
Sbjct 377311 CTCATATGGCCCATC----TAAGATTG---ACAATTCAATCGAAGCTTCTAAAGCAGCAT 377363
Query 62686 AATAAATGGTTTCAAAGATCTTCTTATTTAGATCTTGTGCTTCCGGGCTATCAAATGGAT 62745
|| ||||||||||| || | | || | || || || ||| ||||||||| |
Sbjct 377364 GGTACATGGTTTCAAAAATTTGAATGTTCAAGTCCCTGGCCTCTGGGGAATCAAATGG-T 377422
Query 62746 AATTT-AAGAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGT 62804
||| | || | || || |||| || || ||||||||||||| | | || ||||| | |
Sbjct 377423 AATCTCAATTGCATGAAAACGTCAGCCAAACCTTGAACACCAACAGCAATTGGTCTGTTT 377482
Query 62805 CTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTG 62864
|| | ||||| || ||| ||| || ||| ||||| || | || || || | ||
Sbjct 377483 TTCATGTTAGATGTTCTAGCCTCTTCAACAGGGTAATAGTTTCTGTCAATGATCATGTTC 377542
Query 62865 AGATTTCTGA-CAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATCG------ 62917
| | |||| | ||| || || || || | |||||| ||| | | | |
Sbjct 377543 A-AGTTCTTAGCAACAACCTTAGTAACTTCATGCAGTTTTTCAAAGTTATACCATGATGA 377601
Query 62918 CCC---ATCT-ATT--ACAAA--CATGTTCAATGCAACAGATGCCAGATTACACACGGCT 62969
| | ||| ||| || || || | ||| || || || || || ||||| |||||
Sbjct 377602 CTCTGAATCCGATTCGACGAATGCAGG--CAAAGCCACGGAAGCTAGGTTACAGACGGCA 377659
Query 62970 ACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATAGTT 63029
|| || | | | ||||| | || ||| ||| | ||| |||| |||||
Sbjct 377660 ACTTCTTCTGGTGAGGAATATTCAACAATTTCACAGCACAAGTTAGATGACTTAATAGTA 377719
Query 63030 CCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTA 63089
|| || || | ||| || |||| ||||| |||||||| || | || ||||||||
Sbjct 377720 CCCAAGTTCTTTTGGTTGGATTTTTCATTACAAGCATCCTTGTATAACATAAATGGAGTG 377779
Query 63090 CCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGAT 63149
|| ||||| | || | ||||| ||| || | ||| | | ||||||| | || |
Sbjct 377780 CCTGTTTCCGTTTGTGCTTCTAAAATAGCATACCATAGCTTTTGAGCCTTGAC---AGTT 377836
Query 63150 T-TGTATCTC--CTTTCTCTTTCGTATAGAGTATACAATCGTTCGAACTCGTCTCCCCAA 63206
| | || ||| | |||| ||| ||| ||||| || ||| || || || || ||
Sbjct 377837 TGTCTACCTCTGCCTTCTTCTTCATATTTGGTATATAAAGCTTCAAATTCATCACCGTAA 377896
Query 63207 ACATTGTCCAATCTAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTC 63266
| | || || | ||| ||| || | | || | ||| | | | | ||
Sbjct 377897 AGTTCGTGTAAACCAGGGGCTTCGGAAGGGGAGAATAAAGTCCATTGAGCATTCTGCTCA 377956
Query 63267 ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTTGTTCTATGT 63326
|||| |||||||| | ||| |||||||| | || ||||||||||| | |||
Sbjct 377957 ACTCTCTTCATAAACAAATCTGGAATCCATAAGGCCGGGAATAGATCTCTAGCTCTGATC 378016
Query 63327 TCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGT 63386
|| || || || ||||||| ||| ||||| ||| | | |||||||||||||| |||
Sbjct 378017 TCTTCCTTACCGTGATTCTTTCTAATATCGATGAAATCAAAGATATCAGAATGCCATGGT 378076
Query 63387 TCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCG 63446
|| | ||||| || | | | || || | |||||| || ||||| || | ||||| ||
Sbjct 378077 TCAATGTATAAAGCGAAAGCACCTGGTCTTTTGTTACCCCCCTGGTCAACATATCTTGCA 378136
Query 63447 GTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAG 63506
||||| || ||||||| | ||||||||| |||||||| || ||||||| |||||||
Sbjct 378137 GTGTTGTTGAAAACTCTAATCATTGGAATGATACCGTTAGAAGTACCATTAGTACCGGCA 378196
Query 63507 ATATAGCCTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTA 63566
||||| ||| | | | ||| ||| ||| || ||| || || || || | ||
Sbjct 378197 ATATATGAACCAGTAGATCTAATGTTATGAATGTGTAAACCAATACCACCAGCAGTCTTG 378256
Query 63567 GAGATTAATGCGCATCGTTTTAACGTGTCATAGATGCCTTCTATGCTATCATCGATCATG 63626
|| || || || ||| | || || || ||||| || || || || ||| || ||||
Sbjct 378257 GAAATCAAAGCACATTGCTTCAAAGTATCATAAATACCATCGATAGAATCGTCTTTCATA 378316
Query 63627 TTAAGTAGAAAACAGCTAGACATTTG---GTGACGAGTAGTTCCCGCATTAAATAAGGTA 63683
|| || ||| || ||||||||| |||| ||||| || ||||||||||| ||
Sbjct 378317 GCAACTAAAAAGCATGAAGACATTTGTGCGTGAGGAGTA---CCAGCATTAAATAATGTT 378373
Query 63684 GGAGAAGCGTGCGTAAACCATTTTTCAGA-AAGTAGATTGTACGTCTCAAT-AGCTGAGT 63741
|| |||||||| ||||| || |||| || | |||| || || || || || | || ||
Sbjct 378374 GGTGAAGCGTGAGTAAAGTATCTTTCTGACATGTAG-TTATAAGTTTCTATGACCTTAG- 378431
Query 63742 CTATA-TCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCA 63800
| ||| | || | || || || | | || | ||| | | |||||| |||||||||
Sbjct 378432 CAATATTATCACCG-TGGATACCAATAGAAACTCTCATAACTAAGTGCTGTGGTCTTTCA 378490
Query 63801 ACAATTTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAG 63860
||| ||| ||| |||| || || ||| | |||||||| |||||||| ||||||
Sbjct 378491 GCAACAGCACCGTTAATTCTCAATAAATATGATCTCTCCAAAGTCTTAAAACCGAAATAG 378550
Query 63861 TTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGCTTATCCTTATATTTGTTA 63920
||||| || || || || ||||||| |||| | ||||| | | ||| ||| || | |
Sbjct 378551 TTGTAGGAGAAATCACGGTCGTAAACAATAGCAGAATTCAATTCATCACTATGCTTTTGA 378610
Query 63921 ACTATATCCATGGTAA---TACTT-GAAATAATCGGAGAATGTTTCCCATTTTTAGGATT 63976
|| || || |||| | ||| || || || |||| | | ||||| || || ||
Sbjct 378611 ACGATGTC----GTAAACTTCCTTAGAGATCATTGGAGCCGGCTGACCATTCTTTGGGTT 378666
Query 63977 AACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAG 64036
| ||| | |||| | || || ||| | |||| |||| |||| | ||||||||
Sbjct 378667 GATATAAGTATATAATTGTTCAATAACTGAAGAAAATTGTTTGGTTGTCTGCTTGTGTAA 378726
Query 64037 ATTTGATATGGCTATTCTGGCGGCTAGAATGGCATAATCCGGATG-TTG--TGTAGTACA 64093
|| || || ||||||||||| |||| |||||||||| || || || ||| || |
Sbjct 378727 GTTAGAAATAGCTATTCTGGCAGCTAAGGTGGCATAATCTGGGTGAATGGTTGTCATATA 378786
Query 64094 AGTGGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATA 64150
| || || |||| || |||| | |||||||| | || || || || |||||
Sbjct 378787 A---GCAGCAGTTTCAGCAGCCAAGTTATCCAATTCGATAGTGGTAACACCGTTATA 378840
Score = 262 bits (290), Expect = 5e-65
Identities = 617/915 (67%), Gaps = 25/915 (3%)
Strand=Plus/Minus
Query 33270 TCTTGAGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTT 33329
||||| | |||||| || |||||||| || ||| | ||||| || || || ||
Sbjct 648027 TCTTG-GCCATAACACCAGCCTTTTGGTAGTCGGACACTCTCTTTTCAAAGAAGTTGGTC 647969
Query 33330 TTTCCTTCCAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTGTAAAttttt 33389
|| || | || || ||||||||||| || || || || ||| |||| ||||| ||
Sbjct 647968 TTACCAGCTAAAGAAATATTTTCCATAAAGTCGAATGGGTTGTTAACCTTGTAGTGCTTC 647909
Query 33390 ttAAATCCCAATTCAGA-AATCA--ATCTATCTGCGACGAATTCTATATATGTTTTCATC 33446
|| | || || ||| ||| | ||||||| || || || || | ||| ||||
Sbjct 647908 TTGCAACCTAA---AGATAATAATAATCTATCAGCAACAAACTCAACGTATTGGCACATC 647852
Query 33447 ATTTCACAATTCATTCCTATGAGTTTAACTGGAAGAGCCACAGT-AAGAAATTCTTGTTC 33505
| ||| ||||| || | | | | ||| | || | || ||| | |||| |||
Sbjct 647851 AATTCTGCGTTCATACCCAATAATGCACATGGTAAGGCATCCGTGAAGTATCTCTT-TTC 647793
Query 33506 AATGGATACCGCATTTGTTATAATAAATCTAACGGTTTCTTCACTCGGTGGATGTAATAA 33565
|||| || || | || ||||| ||| |||||||| | || | ||| |
Sbjct 647792 AATGTCAACTGCTTCAGTAATAATCTTGACAACAATTTCTTCATTTGGAG--TGTTGTTC 647735
Query 33566 ATGTTTAAACATCA--AACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAAT 33623
|||| | || | |||| || ||||| ||| | ||| || ||||||| ||| |||
Sbjct 647734 ATGTGAGAGAATAATAAACAAGCAAAATCAGTGTGTAAACCTTCATCTCTACAAATCAAT 647675
Query 33624 TCGTTAGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCG 33683
|| ||||| || || | || ||||||||||| | |||||| | |||||| || |||||
Sbjct 647674 TCATTAGAGAAAGTTAAGCCCGGCATTAGGCCTCTCTTTTTCAACCAAAAGATAGAAGCA 647615
Query 33684 AATGATCCGGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCC--AT 33741
||||| || || |||||||| ||||| || ||||||||||||| | ||| || | ||
Sbjct 647614 AATGAACCAGAGAAGAAGATACCTTCGACAGCAGCAAAGGCAACTAATCTTTCGGCGAAT 647555
Query 33742 AACCGGCGCTGTC-ATGT--ATCCA-CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAA 33797
|| | | | || ||| ||||| || || ||||| || ||||| | || | |||
Sbjct 647554 AA--GCCATTTTCGTTGTTCATCCATCTCATG-GCCCAGTCAGCCTTTTCCTTGATGCAA 647498
Query 33798 GGCATCGTTTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTA 33857
|| || || || || ||||| || | ||| || || ||| |||||||| ||
Sbjct 647497 GGAATAGTCTCAATAGCATTGAATAAGAAGTCAGCCTCCTTTGGATCCTTAACATAGGTG 647438
Query 33858 TCGATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAG 33917
|||||||| | || |||| || || |||||||| || ||||| || ||||||
Sbjct 647437 TCGATCAATAATGAGTAAGTTTCAGAGTGGATGTTTTCCATCATGATCTGGAAACCGTAG 647378
Query 33918 AAACATCTAGCCTCGGTAATCTGCACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTC 33977
||||| | || || | ||| || ||||| | | |||| ||| | || || || ||
Sbjct 647377 AAACACTTGGCTTCTGGAATTTGGACTTCGGCAGAAAAGTTTTCAACCAAGTTCTCGTTA 647318
Query 33978 ACTATTCCATCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCT 34037
|| || || || ||||||||| || || || || | || ||| || ||||| |
Sbjct 647317 ACAATACCGTCGGAGGCTGCAAAGAAAGCTAAAACTCTTGAAATGAAAAATCTTTCGCTT 647258
Query 34038 GGTGTTAGT---TTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTC 34094
||| | || ||||| |||| |||| || |||| ||| | |||||| | |||
Sbjct 647257 TCATTTAATCTGTTGTTCCAGTCATGAGTATCCTTTGATAAATCAATTTCTTCTGCAGTC 647198
Query 34095 CAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGGATTGGGAAA 34154
|| || || || || ||||| || ||||| | |||||| ||||| |||| ||||||||
Sbjct 647197 CAGAAAGAAGCTTCAGCCTTCTTGTACATTTGCCAGATTTCATGGTATTTAATTGGGAAC 647138
Query 34155 ATAACAAATCTATTT 34169
| ||||||||| |||
Sbjct 647137 AAAACAAATCTTTTT 647123
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629817348072960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |