Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ogataea_20methanolica_20[genbank_20GCA_5F001600755.1_202016-03-01] 32 sequences; 15,086,366 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq5 452 5e-122 >seq5 Length=1013952 Score = 452 bits (500), Expect = 5e-122 Identities = 1414/2157 (66%), Gaps = 89/2157 (4%) Strand=Plus/Plus Query 62046 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 62105 ||||||||||| | ||| || || | || || | || |||||||| || || || | | Sbjct 376721 GTGAATTGAATAGCAGCAGAAGCAGCTTGTGTTCTTAAGTAGTACATACCAGTCTTCAAA 376780 Query 62106 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGA-ATAACTCGGATCTGCTAT 62164 || |||| ||||| || ||||| ||||| || ||| | || ||| || Sbjct 376781 CCCTTCTTCCAACCGTAGAAGTGCATGGACGTTAACTTACCCATAGTTGGGTTCTT-TAA 376839 Query 62165 ATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTAT 62224 || || ||||| |||||| |||||| ||| | || || || || |||||||| | || Sbjct 376840 GTGAATGTTCATTGATTGAGATTGATCAATGTAAGCACCTCTATCAGCAGCCATATCAAT 376899 Query 62225 GATCGTCTTTTGTGCAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAG 62284 || ||||||||| ||||||||| | || || || | | ||| | || ||||||| Sbjct 376900 AATGCTCTTTTGTGAAATTTCCCAGACTGTCTTGTATAATTTCTTTAATTCGTCTGGAAT 376959 Query 62285 GTTTG-TA--TTCTGAATGGATCCACCATCTACCATAATCCTATTCTTGATCTCATCATT 62341 ||| | || || ||||| || ||| |||| || || |||||| || |||| | Sbjct 376960 GTTCGGTAAGTTTTGAATAGAGCCATTATCTTGAATGATGAAATTCTTCATAGCATCGCT 377019 Query 62342 CCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGGTTAACTACTTGGAATTCTCC 62401 ||||| | || |||| |||| || | || ||||| || | ||||||||| || Sbjct 377020 CCATAGACCTAAATCAACTAAATCTCTTAGCAAATATGGGTTGACAATTTGGAATTCACC 377079 Query 62402 AGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACTCATTATTTCC 62461 | | ||||| | | |||||| ||| || || ||||| | |||| || | || Sbjct 377080 TGCTAGAACTCTTCTTGAGTAAATGTTAGAAGTGTATGGTTCGAAGCACTCGTTGTAACC 377139 Query 62462 CAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACC 62521 ||||||||| | |||||| ||||| ||||| || |||| ||||||| ||||| | ||| Sbjct 377140 CAAAATTTGTGAAGTTGAAGCAGTAGGCATTGGAGCCAGCAATAAAGAGTTTCTCAAACC 377199 Query 62522 GTATGTTCTGATTTTATCTTTTAGATGTTCCCAATTCCAAAGATCCGACGG-----TACA 62576 || | ||| | || |||| | ||||||| ||| | ||| | || ||| Sbjct 377200 GTGCTTGGAAATTCTTTCCTTTAATAGATCCCAATCCCATAAATCAGTTGGCTTCTTACC 377259 Query 62577 ACANNNNNNNNNNNATATTGTAGAATACCGTTA----CTGGCGTACGATCCTACATATGT 62632 || |||||| | ||| | | |||| | || | | | || | Sbjct 377260 CCATAAGTCGA-----ATTGTAATAGACCTTGAGAAGCTGGAGAAC---CTTGGAAAT-T 377310 Query 62633 ATCATATGGTCCTTCCTTCTCAGCTAGTTTACAACTC-------GCCTCTAATGCACCGT 62685 |||||||| || || | || | | |||| || || ||||| ||| | | Sbjct 377311 CTCATATGGCCCATC----TAAGATTG---ACAATTCAATCGAAGCTTCTAAAGCAGCAT 377363 Query 62686 AATAAATGGTTTCAAAGATCTTCTTATTTAGATCTTGTGCTTCCGGGCTATCAAATGGAT 62745 || ||||||||||| || | | || | || || || ||| ||||||||| | Sbjct 377364 GGTACATGGTTTCAAAAATTTGAATGTTCAAGTCCCTGGCCTCTGGGGAATCAAATGG-T 377422 Query 62746 AATTT-AAGAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGT 62804 ||| | || | || || |||| || || ||||||||||||| | | || ||||| | | Sbjct 377423 AATCTCAATTGCATGAAAACGTCAGCCAAACCTTGAACACCAACAGCAATTGGTCTGTTT 377482 Query 62805 CTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTG 62864 || | ||||| || ||| ||| || ||| ||||| || | || || || | || Sbjct 377483 TTCATGTTAGATGTTCTAGCCTCTTCAACAGGGTAATAGTTTCTGTCAATGATCATGTTC 377542 Query 62865 AGATTTCTGA-CAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATCG------ 62917 | | |||| | ||| || || || || | |||||| ||| | | | | Sbjct 377543 A-AGTTCTTAGCAACAACCTTAGTAACTTCATGCAGTTTTTCAAAGTTATACCATGATGA 377601 Query 62918 CCC---ATCT-ATT--ACAAA--CATGTTCAATGCAACAGATGCCAGATTACACACGGCT 62969 | | ||| ||| || || || | ||| || || || || || ||||| ||||| Sbjct 377602 CTCTGAATCCGATTCGACGAATGCAGG--CAAAGCCACGGAAGCTAGGTTACAGACGGCA 377659 Query 62970 ACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATAGTT 63029 || || | | | ||||| | || ||| ||| | ||| |||| ||||| Sbjct 377660 ACTTCTTCTGGTGAGGAATATTCAACAATTTCACAGCACAAGTTAGATGACTTAATAGTA 377719 Query 63030 CCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTA 63089 || || || | ||| || |||| ||||| |||||||| || | || |||||||| Sbjct 377720 CCCAAGTTCTTTTGGTTGGATTTTTCATTACAAGCATCCTTGTATAACATAAATGGAGTG 377779 Query 63090 CCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGAT 63149 || ||||| | || | ||||| ||| || | ||| | | ||||||| | || | Sbjct 377780 CCTGTTTCCGTTTGTGCTTCTAAAATAGCATACCATAGCTTTTGAGCCTTGAC---AGTT 377836 Query 63150 T-TGTATCTC--CTTTCTCTTTCGTATAGAGTATACAATCGTTCGAACTCGTCTCCCCAA 63206 | | || ||| | |||| ||| ||| ||||| || ||| || || || || || Sbjct 377837 TGTCTACCTCTGCCTTCTTCTTCATATTTGGTATATAAAGCTTCAAATTCATCACCGTAA 377896 Query 63207 ACATTGTCCAATCTAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTC 63266 | | || || | ||| ||| || | | || | ||| | | | | || Sbjct 377897 AGTTCGTGTAAACCAGGGGCTTCGGAAGGGGAGAATAAAGTCCATTGAGCATTCTGCTCA 377956 Query 63267 ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTTGTTCTATGT 63326 |||| |||||||| | ||| |||||||| | || ||||||||||| | ||| Sbjct 377957 ACTCTCTTCATAAACAAATCTGGAATCCATAAGGCCGGGAATAGATCTCTAGCTCTGATC 378016 Query 63327 TCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGT 63386 || || || || ||||||| ||| ||||| ||| | | |||||||||||||| ||| Sbjct 378017 TCTTCCTTACCGTGATTCTTTCTAATATCGATGAAATCAAAGATATCAGAATGCCATGGT 378076 Query 63387 TCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCG 63446 || | ||||| || | | | || || | |||||| || ||||| || | ||||| || Sbjct 378077 TCAATGTATAAAGCGAAAGCACCTGGTCTTTTGTTACCCCCCTGGTCAACATATCTTGCA 378136 Query 63447 GTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAG 63506 ||||| || ||||||| | ||||||||| |||||||| || ||||||| ||||||| Sbjct 378137 GTGTTGTTGAAAACTCTAATCATTGGAATGATACCGTTAGAAGTACCATTAGTACCGGCA 378196 Query 63507 ATATAGCCTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTA 63566 ||||| ||| | | | ||| ||| ||| || ||| || || || || | || Sbjct 378197 ATATATGAACCAGTAGATCTAATGTTATGAATGTGTAAACCAATACCACCAGCAGTCTTG 378256 Query 63567 GAGATTAATGCGCATCGTTTTAACGTGTCATAGATGCCTTCTATGCTATCATCGATCATG 63626 || || || || ||| | || || || ||||| || || || || ||| || |||| Sbjct 378257 GAAATCAAAGCACATTGCTTCAAAGTATCATAAATACCATCGATAGAATCGTCTTTCATA 378316 Query 63627 TTAAGTAGAAAACAGCTAGACATTTG---GTGACGAGTAGTTCCCGCATTAAATAAGGTA 63683 || || ||| || ||||||||| |||| ||||| || ||||||||||| || Sbjct 378317 GCAACTAAAAAGCATGAAGACATTTGTGCGTGAGGAGTA---CCAGCATTAAATAATGTT 378373 Query 63684 GGAGAAGCGTGCGTAAACCATTTTTCAGA-AAGTAGATTGTACGTCTCAAT-AGCTGAGT 63741 || |||||||| ||||| || |||| || | |||| || || || || || | || || Sbjct 378374 GGTGAAGCGTGAGTAAAGTATCTTTCTGACATGTAG-TTATAAGTTTCTATGACCTTAG- 378431 Query 63742 CTATA-TCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCA 63800 | ||| | || | || || || | | || | ||| | | |||||| ||||||||| Sbjct 378432 CAATATTATCACCG-TGGATACCAATAGAAACTCTCATAACTAAGTGCTGTGGTCTTTCA 378490 Query 63801 ACAATTTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAG 63860 ||| ||| ||| |||| || || ||| | |||||||| |||||||| |||||| Sbjct 378491 GCAACAGCACCGTTAATTCTCAATAAATATGATCTCTCCAAAGTCTTAAAACCGAAATAG 378550 Query 63861 TTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGCTTATCCTTATATTTGTTA 63920 ||||| || || || || ||||||| |||| | ||||| | | ||| ||| || | | Sbjct 378551 TTGTAGGAGAAATCACGGTCGTAAACAATAGCAGAATTCAATTCATCACTATGCTTTTGA 378610 Query 63921 ACTATATCCATGGTAA---TACTT-GAAATAATCGGAGAATGTTTCCCATTTTTAGGATT 63976 || || || |||| | ||| || || || |||| | | ||||| || || || Sbjct 378611 ACGATGTC----GTAAACTTCCTTAGAGATCATTGGAGCCGGCTGACCATTCTTTGGGTT 378666 Query 63977 AACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAG 64036 | ||| | |||| | || || ||| | |||| |||| |||| | |||||||| Sbjct 378667 GATATAAGTATATAATTGTTCAATAACTGAAGAAAATTGTTTGGTTGTCTGCTTGTGTAA 378726 Query 64037 ATTTGATATGGCTATTCTGGCGGCTAGAATGGCATAATCCGGATG-TTG--TGTAGTACA 64093 || || || ||||||||||| |||| |||||||||| || || || ||| || | Sbjct 378727 GTTAGAAATAGCTATTCTGGCAGCTAAGGTGGCATAATCTGGGTGAATGGTTGTCATATA 378786 Query 64094 AGTGGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATA 64150 | || || |||| || |||| | |||||||| | || || || || ||||| Sbjct 378787 A---GCAGCAGTTTCAGCAGCCAAGTTATCCAATTCGATAGTGGTAACACCGTTATA 378840 Score = 262 bits (290), Expect = 5e-65 Identities = 617/915 (67%), Gaps = 25/915 (3%) Strand=Plus/Minus Query 33270 TCTTGAGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTT 33329 ||||| | |||||| || |||||||| || ||| | ||||| || || || || Sbjct 648027 TCTTG-GCCATAACACCAGCCTTTTGGTAGTCGGACACTCTCTTTTCAAAGAAGTTGGTC 647969 Query 33330 TTTCCTTCCAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTGTAAAttttt 33389 || || | || || ||||||||||| || || || || ||| |||| ||||| || Sbjct 647968 TTACCAGCTAAAGAAATATTTTCCATAAAGTCGAATGGGTTGTTAACCTTGTAGTGCTTC 647909 Query 33390 ttAAATCCCAATTCAGA-AATCA--ATCTATCTGCGACGAATTCTATATATGTTTTCATC 33446 || | || || ||| ||| | ||||||| || || || || | ||| |||| Sbjct 647908 TTGCAACCTAA---AGATAATAATAATCTATCAGCAACAAACTCAACGTATTGGCACATC 647852 Query 33447 ATTTCACAATTCATTCCTATGAGTTTAACTGGAAGAGCCACAGT-AAGAAATTCTTGTTC 33505 | ||| ||||| || | | | | ||| | || | || ||| | |||| ||| Sbjct 647851 AATTCTGCGTTCATACCCAATAATGCACATGGTAAGGCATCCGTGAAGTATCTCTT-TTC 647793 Query 33506 AATGGATACCGCATTTGTTATAATAAATCTAACGGTTTCTTCACTCGGTGGATGTAATAA 33565 |||| || || | || ||||| ||| |||||||| | || | ||| | Sbjct 647792 AATGTCAACTGCTTCAGTAATAATCTTGACAACAATTTCTTCATTTGGAG--TGTTGTTC 647735 Query 33566 ATGTTTAAACATCA--AACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAAT 33623 |||| | || | |||| || ||||| ||| | ||| || ||||||| ||| ||| Sbjct 647734 ATGTGAGAGAATAATAAACAAGCAAAATCAGTGTGTAAACCTTCATCTCTACAAATCAAT 647675 Query 33624 TCGTTAGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCG 33683 || ||||| || || | || ||||||||||| | |||||| | |||||| || ||||| Sbjct 647674 TCATTAGAGAAAGTTAAGCCCGGCATTAGGCCTCTCTTTTTCAACCAAAAGATAGAAGCA 647615 Query 33684 AATGATCCGGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCC--AT 33741 ||||| || || |||||||| ||||| || ||||||||||||| | ||| || | || Sbjct 647614 AATGAACCAGAGAAGAAGATACCTTCGACAGCAGCAAAGGCAACTAATCTTTCGGCGAAT 647555 Query 33742 AACCGGCGCTGTC-ATGT--ATCCA-CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAA 33797 || | | | || ||| ||||| || || ||||| || ||||| | || | ||| Sbjct 647554 AA--GCCATTTTCGTTGTTCATCCATCTCATG-GCCCAGTCAGCCTTTTCCTTGATGCAA 647498 Query 33798 GGCATCGTTTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTA 33857 || || || || || ||||| || | ||| || || ||| |||||||| || Sbjct 647497 GGAATAGTCTCAATAGCATTGAATAAGAAGTCAGCCTCCTTTGGATCCTTAACATAGGTG 647438 Query 33858 TCGATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAG 33917 |||||||| | || |||| || || |||||||| || ||||| || |||||| Sbjct 647437 TCGATCAATAATGAGTAAGTTTCAGAGTGGATGTTTTCCATCATGATCTGGAAACCGTAG 647378 Query 33918 AAACATCTAGCCTCGGTAATCTGCACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTC 33977 ||||| | || || | ||| || ||||| | | |||| ||| | || || || || Sbjct 647377 AAACACTTGGCTTCTGGAATTTGGACTTCGGCAGAAAAGTTTTCAACCAAGTTCTCGTTA 647318 Query 33978 ACTATTCCATCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCT 34037 || || || || ||||||||| || || || || | || ||| || ||||| | Sbjct 647317 ACAATACCGTCGGAGGCTGCAAAGAAAGCTAAAACTCTTGAAATGAAAAATCTTTCGCTT 647258 Query 34038 GGTGTTAGT---TTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTC 34094 ||| | || ||||| |||| |||| || |||| ||| | |||||| | ||| Sbjct 647257 TCATTTAATCTGTTGTTCCAGTCATGAGTATCCTTTGATAAATCAATTTCTTCTGCAGTC 647198 Query 34095 CAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGGATTGGGAAA 34154 || || || || || ||||| || ||||| | |||||| ||||| |||| |||||||| Sbjct 647197 CAGAAAGAAGCTTCAGCCTTCTTGTACATTTGCCAGATTTCATGGTATTTAATTGGGAAC 647138 Query 34155 ATAACAAATCTATTT 34169 | ||||||||| ||| Sbjct 647137 AAAACAAATCTTTTT 647123 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629817348072960