Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ogataea_20methanolica_20[genbank_20GCA_5F001600755.1_202016-03-01] 32 sequences; 15,086,366 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq5 118 1e-21 >seq5 Length=1013952 Score = 118 bits (130), Expect = 1e-21 Identities = 287/427 (67%), Gaps = 11/427 (3%) Strand=Plus/Plus Query 52522 GACTTGATACTCAACGCTTTTGACAATGTTCCGTGTGTGCGCAAAAAGGATGATTGGGCA 52581 ||||| || |||| ||| |||| | | |||| || | |||||| ||| ||||| Sbjct 647466 GACTTCTTATTCAATGCTATTGAGACTATTCCTTGCATCAAGGAAAAGGCTGACTGGGCC 647525 Query 52582 TTGAAATGGATCGAAAACGACAAAGCCACTTTTGCCGAACGTCTGGTCGCGTTTGCTATA 52641 ||| |||||| | ||||| || | | || |||||| | | || || |||||| Sbjct 647526 ATGAGATGGATGAACAACGAAAATGGCTTATTCGCCGAAAGATTAGTTGCCTTTGCTGCT 647585 Query 52642 GTGGAAGGTGTGtttttttCGGGTAGTTTTGCGGCAATATTTTACATCAAAACCTTGGGC 52701 || |||||| | || || || ||| ||||| | || |||| | |||| ||| Sbjct 647586 GTCGAAGGTATCTTCTTCTCTGGTTCATTTGCTTCTATCTTTTGGTTGAAAAAGAGAGGC 647645 Query 52702 ATAATGCCCGGCCTCACGTTTAGCAACGAGTTGATATCGCGCGACGAAGGAATGCACACA 52761 ||||||| ||| | || || || || ||||| | | || ||||| | ||||| Sbjct 647646 CTAATGCCGGGCTTAACTTTCTCTAATGAATTGATTTGTAGAGATGAAGGTTTACACACT 647705 Query 52762 GATTTTGCGTGTTTGTATTATAATACGCGCGTTAAAGAAAAATTGTCATATGAAAAAATT 52821 |||||||| ||||| ||||| | | | | | || || | | || ||||| ||||| Sbjct 647706 GATTTTGCTTGTTT--ATTATTCT-CTCACATGAAC--AACACTC-CAAATGAAGAAATT 647759 Query 52822 CTAGACATGTTTAAA---GAGGCCGTCGACATTGAAAA-AGAGTTTTTTACGGACGCTTT 52877 | | || | ||| || || || ||||||||||| ||| | || ||||| || || Sbjct 647760 GTTGTCAAGATTATTACTGAAGCAGTTGACATTGAAAAGAGA-TACTTCACGGATGCCTT 647818 Query 52878 ACCCGTATCATTGTTGGGCATGAACGCGACCATGATGTGCGAGTACATCGAGTTTGTTGC 52937 ||| |||| ||||| |||||||| |||||||| | ||| | ||||||||||| Sbjct 647819 ACCATGTGCATTATTGGGTATGAACGCAGAATTGATGTGCCAATACGTTGAGTTTGTTGC 647878 Query 52938 GGACAGA 52944 || ||| Sbjct 647879 TGATAGA 647885 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496063801574400