Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ogataea_20methanolica_20[genbank_20GCA_5F001600755.1_202016-03-01]
32 sequences; 15,086,366 total letters
Query= NC_003529.1
Length=155060
Score E
Sequences producing significant alignments: (Bits) Value
seq5 118 1e-21
>seq5
Length=1013952
Score = 118 bits (130), Expect = 1e-21
Identities = 287/427 (67%), Gaps = 11/427 (3%)
Strand=Plus/Plus
Query 52522 GACTTGATACTCAACGCTTTTGACAATGTTCCGTGTGTGCGCAAAAAGGATGATTGGGCA 52581
||||| || |||| ||| |||| | | |||| || | |||||| ||| |||||
Sbjct 647466 GACTTCTTATTCAATGCTATTGAGACTATTCCTTGCATCAAGGAAAAGGCTGACTGGGCC 647525
Query 52582 TTGAAATGGATCGAAAACGACAAAGCCACTTTTGCCGAACGTCTGGTCGCGTTTGCTATA 52641
||| |||||| | ||||| || | | || |||||| | | || || ||||||
Sbjct 647526 ATGAGATGGATGAACAACGAAAATGGCTTATTCGCCGAAAGATTAGTTGCCTTTGCTGCT 647585
Query 52642 GTGGAAGGTGTGtttttttCGGGTAGTTTTGCGGCAATATTTTACATCAAAACCTTGGGC 52701
|| |||||| | || || || ||| ||||| | || |||| | |||| |||
Sbjct 647586 GTCGAAGGTATCTTCTTCTCTGGTTCATTTGCTTCTATCTTTTGGTTGAAAAAGAGAGGC 647645
Query 52702 ATAATGCCCGGCCTCACGTTTAGCAACGAGTTGATATCGCGCGACGAAGGAATGCACACA 52761
||||||| ||| | || || || || ||||| | | || ||||| | |||||
Sbjct 647646 CTAATGCCGGGCTTAACTTTCTCTAATGAATTGATTTGTAGAGATGAAGGTTTACACACT 647705
Query 52762 GATTTTGCGTGTTTGTATTATAATACGCGCGTTAAAGAAAAATTGTCATATGAAAAAATT 52821
|||||||| ||||| ||||| | | | | | || || | | || ||||| |||||
Sbjct 647706 GATTTTGCTTGTTT--ATTATTCT-CTCACATGAAC--AACACTC-CAAATGAAGAAATT 647759
Query 52822 CTAGACATGTTTAAA---GAGGCCGTCGACATTGAAAA-AGAGTTTTTTACGGACGCTTT 52877
| | || | ||| || || || ||||||||||| ||| | || ||||| || ||
Sbjct 647760 GTTGTCAAGATTATTACTGAAGCAGTTGACATTGAAAAGAGA-TACTTCACGGATGCCTT 647818
Query 52878 ACCCGTATCATTGTTGGGCATGAACGCGACCATGATGTGCGAGTACATCGAGTTTGTTGC 52937
||| |||| ||||| |||||||| |||||||| | ||| | |||||||||||
Sbjct 647819 ACCATGTGCATTATTGGGTATGAACGCAGAATTGATGTGCCAATACGTTGAGTTTGTTGC 647878
Query 52938 GGACAGA 52944
|| |||
Sbjct 647879 TGATAGA 647885
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496063801574400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |