Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ogataea_20methanolica_20[genbank_20GCA_5F001600755.1_202016-03-01] 32 sequences; 15,086,366 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq5 482 3e-131 seq1 116 5e-21 >seq5 Length=1013952 Score = 482 bits (534), Expect = 3e-131 Identities = 1453/2212 (66%), Gaps = 61/2212 (3%) Strand=Plus/Plus Query 78718 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 78777 ||||||||||| | ||| || || | || || | || |||||||| || || || | | Sbjct 376721 GTGAATTGAATAGCAGCAGAAGCAGCTTGTGTTCTTAAGTAGTACATACCAGTCTTCAAA 376780 Query 78778 CCGAGACTCCATCCGTAGAAATGCATACTCGTTAGTTTGGA-ATAACTCGGATCTGCTAT 78836 || |||| |||||||| ||||| ||||| || ||| | || ||| || Sbjct 376781 CCCTTCTTCCAACCGTAGAAGTGCATGGACGTTAACTTACCCATAGTTGGGTTCTT-TAA 376839 Query 78837 ATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTAT 78896 || || ||||| |||||| |||||| ||| | || || || || |||||||| | || Sbjct 376840 GTGAATGTTCATTGATTGAGATTGATCAATGTAAGCACCTCTATCAGCAGCCATATCAAT 376899 Query 78897 GATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAG 78956 || ||||||||| ||||||||| | || || || | | ||| | || ||||||| Sbjct 376900 AATGCTCTTTTGTGAAATTTCCCAGACTGTCTTGTATAATTTCTTTAATTCGTCTGGAAT 376959 Query 78957 GTTTG-TA--TTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCTTCATT 79013 ||| | || || ||||| || ||| |||| || || |||||| || | || | Sbjct 376960 GTTCGGTAAGTTTTGAATAGAGCCATTATCTTGAATGATGAAATTCTTCATAGCATCGCT 377019 Query 79014 CCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCC 79073 ||||| | || |||| |||| || | || || || || | ||| ||||| || Sbjct 377020 CCATAGACCTAAATCAACTAAATCTCTTAGCAAATATGGGTTGACAATTTGGAATTCACC 377079 Query 79074 AGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCACCGATTCATTATTTCC 79133 | | ||||| | | |||||| ||| || |||||||| | | || || | || Sbjct 377080 TGCTAGAACTCTTCTTGAGTAAATGTTAGAAGTGTATGGTTCGAAGCACTCGTTGTAACC 377139 Query 79134 CAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACC 79193 ||||||||| | |||||| || || ||||| || |||| ||||||| ||||| | ||| Sbjct 377140 CAAAATTTGTGAAGTTGAAGCAGTAGGCATTGGAGCCAGCAATAAAGAGTTTCTCAAACC 377199 Query 79194 GTATGATCTGATTTTAT---CTTTTAGAGATTCCCAATCCCAAAGATCAGACGGGACAAC 79250 || | | || || | |||| | |||| |||||||||| | ||||| || Sbjct 377200 GT--GCTTGGAAATTCTTTCCTTTAATAGAT-CCCAATCCCATAAATCAGTTGGCTTCTT 377256 Query 79251 ATTCCAAAGATCATATTGTAGAATACCGTTACTAGCGTATGATCCTGTGTATGTTTCATA 79310 | ||| | || |||||| | ||| | | ||| || ||| | | | ||||| Sbjct 377257 ACCCCATAAGTCGAATTGTAATAGACCTTGAGAAGCTGGAGAACCTTGGAAATTCTCATA 377316 Query 79311 AGGTCCTTCCTTTTCGGCTAATTCACAACTCGCCTCTAATGCTCCGTAATAAATGGTTTC 79370 || || || | |||||| || ||||| || | | || |||||||| Sbjct 377317 TGGCCCATCTAAGATTGACAATTCAATCGAAGCTTCTAAAGCAGCATGGTACATGGTTTC 377376 Query 79371 GAAAATCTTCTTATTGAGATCTTGTGCTTCTAGGCTATCAAATGGATAATTT-AAGAGAA 79429 ||||| | | || | || || ||| || ||||||||| |||| | || | | Sbjct 377377 AAAAATTTGAATGTTCAAGTCCCTGGCCTCTGGGGAATCAAATGG-TAATCTCAATTGCA 377435 Query 79430 TAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAAA 79489 | || |||| || || ||||||||||||| | | || ||||| | | || | ||||| Sbjct 377436 TGAAAACGTCAGCCAAACCTTGAACACCAACAGCAATTGGTCTGTTTTTCATGTTAGATG 377495 Query 79490 TTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTCCTGACTA 79549 || ||| ||| || ||| ||||| || | || || || | || | ||| | | | Sbjct 377496 TTCTAGCCTCTTCAACAGGGTAATAGTTTCTGTCAATGATCATGTTCAAGTTCTTAGCAA 377555 Query 79550 TTACTTTGACCACATCCTTTAGTTTGAGAAAATCAAATCGTCCA---TCT-------ATT 79599 || || || || | ||||| ||| | | | | | ||| ||| Sbjct 377556 CAACCTTAGTAACTTCATGCAGTTTTTCAAAGTTATACCATGATGACTCTGAATCCGATT 377615 Query 79600 --ACAAA--CATGTTCAACGCGACAGATGCCAGATTACAAACGGCTACCTCATTAGCATC 79655 || || || | ||| || || || || || ||||| ||||| || || | | Sbjct 377616 CGACGAATGCAGG--CAAAGCCACGGAAGCTAGGTTACAGACGGCAACTTCTTCTGGTGA 377673 Query 79656 CGCATATTGTATTATTTCAGTGCAGAGGTTACTACACTTAATGGTTCCTAAATTTTGTTG 79715 | ||||| | |||||| ||| | |||| ||||||| || || || || | ||| Sbjct 377674 GGAATATTCAACAATTTCACAGCACAAGTTAGATGACTTAATAGTACCCAAGTTCTTTTG 377733 Query 79716 ATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAACGGAGTACCAGTTTCAATCTG 79775 || |||| ||||| |||||||| || | || || ||||| || ||||| | || Sbjct 377734 GTTGGATTTTTCATTACAAGCATCCTTGTATAACATAAATGGAGTGCCTGTTTCCGTTTG 377793 Query 79776 AGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGACT-TGTATCTCTT-- 79832 | ||||| ||| || | ||| | | ||||||| | || | | || |||| Sbjct 377794 TGCTTCTAAAATAGCATACCATAGCTTTTGAGCCTTGAC---AGTTTGTCTACCTCTGCC 377850 Query 79833 TTCTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAACATCGTCTAATCC 79892 |||| ||| |||| |||||||| ||| || || || || ||| |||| ||| || Sbjct 377851 TTCTTCTTCATATTTGGTATATAAAGCTTCAAATTCATCACCGTAAAGTTCGTGTAAACC 377910 Query 79893 AGGACATTCGTCAGGACACATCAACGACCACTCTCCATCATCCTTTACTCGTTTCATAAA 79952 ||| |||| ||| | | || | ||| | ||| | || |||| |||||||| Sbjct 377911 AGGGGCTTCGGAAGGGGAGAATAAAGTCCATTGAGCATTCTGCTCAACTCTCTTCATAAA 377970 Query 79953 GAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGT 80012 | ||| |||||||| | || ||||||||||| | ||| ||| || || || Sbjct 377971 CAAATCTGGAATCCATAAGGCCGGGAATAGATCTCTAGCTCTGATCTCTTCCTTACCGTG 378030 Query 80013 ATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGC 80072 ||||||| ||| ||||| ||| | | |||||||||||||| ||||| | ||||| || Sbjct 378031 ATTCTTTCTAATATCGATGAAATCAAAGATATCAGAATGCCATGGTTCAATGTATAAAGC 378090 Query 80073 CATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAAC 80132 | | | || |||| |||||| || ||||| || | ||||| || ||||| || |||| Sbjct 378091 GAAAGCACCTGGTCTTTTGTTACCCCCCTGGTCAACATATCTTGCAGTGTTGTTGAAAAC 378150 Query 80133 TCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACT 80192 ||| | ||||||||| ||||| || || |||||||| || |||| ||||| ||| | Sbjct 378151 TCTAATCATTGGAATGATACCGTTAGAAGTACCATTAGTACCGGCAATATATGAACCAGT 378210 Query 80193 GGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCA 80252 | | ||| ||| ||| || ||| || || || || | || || || || || || Sbjct 378211 AGATCTAATGTTATGAATGTGTAAACCAATACCACCAGCAGTCTTGGAAATCAAAGCACA 378270 Query 80253 TCGTTTTAACGTATCATAGATGCCCTCTATGCTATCATCAATCATGTTAAGTAGAAAACA 80312 | | || || |||||||| || || || || ||| || |||| || || ||| || Sbjct 378271 TTGCTTCAAAGTATCATAAATACCATCGATAGAATCGTCTTTCATAGCAACTAAAAAGCA 378330 Query 80313 GCTAGACATTTG---GTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGT 80369 ||||||||| |||| | ||| || ||||||||||| || || |||||||| || Sbjct 378331 TGAAGACATTTGTGCGTGAGG---AGTACCAGCATTAAATAATGTTGGTGAAGCGTGAGT 378387 Query 80370 AAACCATTTTTCAGACA-GTAGATTGTACGTCTCAAT-AGCTGATTCTATA-TCCCATTG 80426 ||| || |||| |||| |||| || || || || || | || | | ||| | || | Sbjct 378388 AAAGTATCTTTCTGACATGTAG-TTATAAGTTTCTATGACCTTA-GCAATATTATCACCG 378445 Query 80427 ATGAATTCCTACCGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTATT 80486 || || || | | || | ||| | | |||||| ||||||||| | | || Sbjct 378446 -TGGATACCAATAGAAACTCTCATAACTAAGTGCTGTGGTCTTTCAGCAACAGCACCGTT 378504 Query 80487 TATTTTCAACAAGTAAGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTC 80546 ||| |||| || || ||| | |||||||| |||||||| ||||||||||| || || || Sbjct 378505 AATTCTCAATAAATATGATCTCTCCAAAGTCTTAAAACCGAAATAGTTGTAGGAGAAATC 378564 Query 80547 TCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACATCCATGGT 80606 || ||||||| |||| | || || | || ||| ||| || | ||| | || || Sbjct 378565 ACGGTCGTAAACAATAGCAGAATTCAATTCATCACTATGCTTTTGAACGATGTC----GT 378620 Query 80607 GA---TACTT-GAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATA 80662 | | ||| || || || |||| | | ||||| || || || | ||| | ||| Sbjct 378621 AAACTTCCTTAGAGATCATTGGAGCCGGCTGACCATTCTTTGGGTTGATATAAGTATATA 378680 Query 80663 AATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTA 80722 | | || || ||| | |||| |||| |||| | |||||||| || || | |||| Sbjct 378681 ATTGTTCAATAACTGAAGAAAATTGTTTGGTTGTCTGCTTGTGTAAGTTAGAAATAGCTA 378740 Query 80723 TTCTGGCGGCTAAAATGGCATAATCTGGATG-TTG--TGTAGTACAAGTGGCTGCTATTT 80779 ||||||| ||||| ||||||||||||| || || ||| || || || || ||| Sbjct 378741 TTCTGGCAGCTAAGGTGGCATAATCTGGGTGAATGGTTGTCATATAA---GCAGCAGTTT 378797 Query 80780 CGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATATATTCCTTGGATAACCT 80839 | || |||| | |||||||| | || || || || ||||| | || ||||| Sbjct 378798 CAGCAGCCAAGTTATCCAATTCGATAGTGGTAACACCGTTATAAACACCAGAAATAACAC 378857 Query 80840 TCATAGCTATTTTAATAGGATCTATATGATCAGTGTTTAAGCCATAACATAA 80891 | || ||| || || ||| | ||| | | || ||| || |||||||| Sbjct 378858 GCTGAGTAATTGCAACAGCATCCACATGTTTTGGGTCTAAACCGTAACATAA 378909 Score = 262 bits (290), Expect = 6e-65 Identities = 617/915 (67%), Gaps = 25/915 (3%) Strand=Plus/Minus Query 49648 TCTTGAGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTT 49707 ||||| | |||||| || |||||||| || ||| | ||||| || || || || Sbjct 648027 TCTTG-GCCATAACACCAGCCTTTTGGTAGTCGGACACTCTCTTTTCAAAGAAGTTGGTC 647969 Query 49708 TTTCCTTCCAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAttttt 49767 || || | || || ||||||||||| || || || || ||| |||| || || || Sbjct 647968 TTACCAGCTAAAGAAATATTTTCCATAAAGTCGAATGGGTTGTTAACCTTGTAGTGCTTC 647909 Query 49768 ttAAATCCCAATTCAGA-AATCA--ATCTATCCGCGACAAATTCTATATATGTTTTCATC 49824 || | || || ||| ||| | ||||||| || ||||| || | ||| |||| Sbjct 647908 TTGCAACCTAA---AGATAATAATAATCTATCAGCAACAAACTCAACGTATTGGCACATC 647852 Query 49825 ATTTCACAATTCATTCCTATAAGTTTAACTGGAAGAGCCGCAGT-AAGAAATTCTTGTTC 49883 | ||| ||||| || | | | | ||| | || | || ||| | |||| ||| Sbjct 647851 AATTCTGCGTTCATACCCAATAATGCACATGGTAAGGCATCCGTGAAGTATCTCTT-TTC 647793 Query 49884 AATGGATACCGCATCTGTTATAATAGATCTAACGGTTTCTTCACTCGGTGGATGCAATAA 49943 |||| || || || || ||||| ||| |||||||| | || | || | Sbjct 647792 AATGTCAACTGCTTCAGTAATAATCTTGACAACAATTTCTTCATTTGGAG--TGTTGTTC 647735 Query 49944 ATGTTTAAACATCA--AACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGT 50001 |||| | || | |||| || ||||| ||| | ||| || ||||||| ||| | | Sbjct 647734 ATGTGAGAGAATAATAAACAAGCAAAATCAGTGTGTAAACCTTCATCTCTACAAATCAAT 647675 Query 50002 TCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCA 50061 || || || || || | || ||||||||||| | |||||| | |||||| || || ||| Sbjct 647674 TCATTAGAGAAAGTTAAGCCCGGCATTAGGCCTCTCTTTTTCAACCAAAAGATAGAAGCA 647615 Query 50062 AATGACCCAGAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCC--AT 50119 ||||| ||||| |||||||| ||||| || || ||||||||||| | ||| || | || Sbjct 647614 AATGAACCAGAGAAGAAGATACCTTCGACAGCAGCAAAGGCAACTAATCTTTCGGCGAAT 647555 Query 50120 AACTGGCGCTGTC-ATGT--ATCCA-CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAA 50175 || | | | || ||| ||||| || || ||||| || ||||| | || | ||| Sbjct 647554 AA--GCCATTTTCGTTGTTCATCCATCTCATG-GCCCAGTCAGCCTTTTCCTTGATGCAA 647498 Query 50176 GGCATCGTTTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTA 50235 || || || || || ||||| || | ||| || || ||| |||||||| || Sbjct 647497 GGAATAGTCTCAATAGCATTGAATAAGAAGTCAGCCTCCTTTGGATCCTTAACATAGGTG 647438 Query 50236 TCGATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAG 50295 |||||||| | || |||| || || |||||||| || ||||| || |||||| Sbjct 647437 TCGATCAATAATGAGTAAGTTTCAGAGTGGATGTTTTCCATCATGATCTGGAAACCGTAG 647378 Query 50296 AAACATCTAGCCTCGGTAATCTGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTC 50355 ||||| | || || | ||| || ||||| | | |||| |||| | || || || || Sbjct 647377 AAACACTTGGCTTCTGGAATTTGGACTTCGGCAGAAAAGTTTTCAACCAAGTTCTCGTTA 647318 Query 50356 ACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATGTTTTTCGTTG 50415 || || ||||| ||||||||| || || || || | || ||| | ||||| | Sbjct 647317 ACAATACCGTCGGAGGCTGCAAAGAAAGCTAAAACTCTTGAAATGAAAAATCTTTCGCTT 647258 Query 50416 GGTGTTAGT---TTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTC 50472 ||| | || ||||| |||| |||| || |||| ||| | |||||| | ||| Sbjct 647257 TCATTTAATCTGTTGTTCCAGTCATGAGTATCCTTTGATAAATCAATTTCTTCTGCAGTC 647198 Query 50473 CAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGGATTGGGAAA 50532 || || || || || ||||| || ||||| | |||||| ||||| |||| |||||||| Sbjct 647197 CAGAAAGAAGCTTCAGCCTTCTTGTACATTTGCCAGATTTCATGGTATTTAATTGGGAAC 647138 Query 50533 ATAACAAATCTATTT 50547 | ||||||||| ||| Sbjct 647137 AAAACAAATCTTTTT 647123 >seq1 Length=3681944 Score = 116 bits (128), Expect = 5e-21 Identities = 347/526 (66%), Gaps = 11/526 (2%) Strand=Plus/Plus Query 78753 TAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAGAAATGCATACTCGTTAG 78812 || |||||| || || |||||||| || |||| | || || |||||||| || || Sbjct 1059276 TAAATAGTAAATACCAGTTTTTAGTCCTTTCTTCCAAGCATAAAAGTGCATACTTGTAAG 1059335 Query 78813 TTTGGAATAACTCGGATCTGCTATATGGATA--TTCATAGATTGACTTTGATCGATGAAG 78870 || || | || || || ||| ||| || | |||||| ||||| ||||| Sbjct 1059336 CTTCGACATTGTTGGTTCC-CTC-ATGAATAAGTTTAATGATTGAGAATGATCAATGAAT 1059393 Query 78871 GCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTA 78930 | | | | ||| || | ||| | || | |||||| ||||||||||||| |||||| Sbjct 1059394 GGTGCACGGTCAGCTGACATATCAATTAAATGCTTTTGAGGAATTTCCCAAACTGTTTTA 1059453 Query 78931 TAAACTCGCTTAATATCTTCTGGAAGGTTTGTATTC---TGAATGGATCCACCATCTGCC 78987 || | ||||||||| | ||| | | || || ||||| || || | ||| Sbjct 1059454 TACAAAGACTTAATATCATTTGGTATTTCATTAATCAATTGAATTGACCCGTTGT-TGCT 1059512 Query 78988 -ATAATCCTATTCTTGATCTCTTCATTCCATAATTTTCTCTCGGTTAAAAC-TCTAAGGA 79045 || ||| ||||||||| | |||||||||| || ||| ||||| | |||| | Sbjct 1059513 TATTATCTGATTCTTGATATTCTCATTCCATAGATTGAGTTCGATTAAATCGTCTACCAA 1059572 Query 79046 GATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGG 79105 || |||||| | |||||| || || || || ||||| | |||||||||||| | Sbjct 1059573 ATAGCT-ATTAACGATTTGAAACTCACCGGATAAGACTCTTCTTGTGTAAATATTAGATG 1059631 Query 79106 TATATGGTTCCACCGATTCATTATTTCCCAAAATTTGAGCAGTTGATGCCGTTGGCATAG 79165 | ||| || | ||||| | ||| | || || | ||| || || || ||||| Sbjct 1059632 TGATTGGCTCAAAACATTCAGTGAATCCTAGTATCTGTGAAGTCGAGGCAGTAGGCATTA 1059691 Query 79166 GTGCCACCAATAAACTATTTCTAAGACCGTATGATCTGATTTTATCTTTTAGAGATTCCC 79225 || ||||| || ||||| | ||||| ||| | ||||| |||| | || |||| Sbjct 1059692 AGGCAACCAACAACGAGTTTCTGACACCGTTCGATTTTATTTTCGCTTTCAATGAATCCC 1059751 Query 79226 AATCCCAAAGATCAGACGGGACAACATTCCAAAGATCATATTGTAG 79271 ||||||| | ||| || | |||||| | ||||||||| || Sbjct 1059752 AATCCCACAACGAAGATGGTTTATGATTCCACATATCATATTGAAG 1059797 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718268512692480