Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ogataea_20methanolica_20[genbank_20GCA_5F001600755.1_202016-03-01]
32 sequences; 15,086,366 total letters
Query= NC_004002.1
Length=149955
Score E
Sequences producing significant alignments: (Bits) Value
seq5 251 7e-62
>seq5
Length=1013952
Score = 251 bits (278), Expect = 7e-62
Identities = 592/877 (68%), Gaps = 25/877 (3%)
Strand=Plus/Minus
Query 13596 ACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTTTCCATAAAATCAAAT 13655
||||| |||||||||||||| || ||||| | | || |||||||||||||| || |||
Sbjct 647992 ACTCTCTTTTCAAAGAAGTTGGTCTTACCAGCTAAAGAAATATTTTCCATAAAGTCGAAT 647933
Query 13656 GGATTTATTGACATAAACACTTTATCACAACCTAGTTCTAATAGTAATCTATCAGCAATA 13715
|| || | | | | || | ||||||| ||||| |||||||||||||| |
Sbjct 647932 GGGTTGTTAACCTTGTAGTGCTTCTTGCAACCTAAAGATAATAATAATCTATCAGCAACA 647873
Query 13716 AACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAGTTTTACA-GGAATTAT 13774
||||||| ||||| |||| || || |||||||| | || | ||| || |
Sbjct 647872 AACTCAACGTATTGGCACATCAATTCTGCGTTCATACCCAATAATGC-ACATGGTAAGGC 647814
Query 13775 ATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCTTTTATAATAATTGTAATAATCTC 13834
|| || || || ||||| || || || || | ||||| | || ||| ||
Sbjct 647813 ATCCGTGAAGTATCTCTTTTCAATGTCAACTGCTTCAGTAATAATCTTGACAACAATTTC 647754
Query 13835 ATTAGAAGGAGGATATTTTAGATGTTTAAAAAT--TAAACACGCAAAATCACAATGAAGG 13892
| | |||| | || | |||| | ||| |||||| ||||||||| || |
Sbjct 647753 TTCATTTGGAG--TGTTGTTCATGTGAGAGAATAATAAACAAGCAAAATCAGTGTGTAAA 647696
Query 13893 CCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGtttt 13952
|| |||||||||| ||| | ||| || || || ||||| || ||||| | |||| |||
Sbjct 647695 CCTTCATCTCTACAAATCAATTCATTAGAGAAAGTTAAGCCCGGCATTAGGCCTCTCTTT 647636
Query 13953 tttAACCAAAATATTGCAGCAAATGACCCGGAAAAGAATATTCCCTCAACTGCAGCAAAC 14012
|| |||||||| || | ||||||||| || || ||||| || || || || ||||||||
Sbjct 647635 TTCAACCAAAAGATAGAAGCAAATGAACCAGAGAAGAAGATACCTTCGACAGCAGCAAAG 647576
Query 14013 GCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGATATCCATTTTCTAGCCCATTCA 14072
|| | ||||| ||| | || | | |||| ||| |||||| | | ||||| |||
Sbjct 647575 GCAACTAATCTTTCGGCGAATAAGCCATTTTCGTTGTTCATCCATCTCATGGCCCAGTCA 647516
Query 14073 GAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAAATATTCCTTCTCTTTA 14132
| |||| || || || || || ||||||||||| ||||| | || ||| ||
Sbjct 647515 GCCTTTTCCTTGATGCAAGGAATAGTCTCAATAGCATTGAATAAGAAGTCAGCCTCCTTT 647456
Query 14133 G--TACTTGAAAT--GTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTC 14188
| | ||| | || || | |||||||| | || || |||||||||| ||||||||
Sbjct 647455 GGATCCTTAACATAGGTGTCGATCAATAA-TGAG---TAAGTTTCAGAGTGGATGTTTTC 647400
Query 14189 CATAGCTATCTGAAAACCATAAAAGCATCTAGCTTCCGACCATTGTACTTCCGAGTAAAA 14248
||| ||||| ||||| || || || | ||||| | ||| ||||| | ||||
Sbjct 647399 CATCATGATCTGGAAACCGTAGAAACACTTGGCTTCTGGAATTTGGACTTCGGCAGAAAA 647340
Query 14249 TCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGCAAAAAATGCCAATATGTT 14308
|||| |||| || || ||||| ||||| || |||||||| || || || | |
Sbjct 647339 GTTTTCAACCAAGTTCTCGTTAACAATACCGTCGGAGGCTGCAAAGAAAGCTAAAACTCT 647280
Query 14309 TTTAAT--AAAGTATTGCTC-TTCATTGTTGAGTTTTTTCCAATCGGATAA--ATCCTTA 14363
| ||| ||| | || | | |||||| || ||||| || || | ||||||
Sbjct 647279 TGAAATGAAAAATCTTTCGCTTTCATTTAATCTGTTGTTCCAGTC--ATGAGTATCCTTT 647222
Query 14364 GAAAGATCTACTTCATCAACTGTCCAAAAACTAGCGACAGCTTTTTTATACATTACCCAT 14423
|| | ||| | ||| || | ||||| ||| ||| |||| || || |||||| |||
Sbjct 647221 GATAAATCAATTTCTTCTGCAGTCCAGAAAGAAGCTTCAGCCTTCTTGTACATTTGCCAG 647162
Query 14424 ATTTCTT--TATATAATATAGGAAAAACTACAAATCT 14458
||||| | ||| |||| | |||| || ||||||||
Sbjct 647161 ATTTCATGGTATTTAAT-TGGGAACAA-AACAAATCT 647127
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 479727808108800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |