Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ogataea_20methanolica_20[genbank_20GCA_5F001600755.1_202016-03-01] 32 sequences; 15,086,366 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq5 251 7e-62 >seq5 Length=1013952 Score = 251 bits (278), Expect = 7e-62 Identities = 592/877 (68%), Gaps = 25/877 (3%) Strand=Plus/Minus Query 13596 ACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTTTCCATAAAATCAAAT 13655 ||||| |||||||||||||| || ||||| | | || |||||||||||||| || ||| Sbjct 647992 ACTCTCTTTTCAAAGAAGTTGGTCTTACCAGCTAAAGAAATATTTTCCATAAAGTCGAAT 647933 Query 13656 GGATTTATTGACATAAACACTTTATCACAACCTAGTTCTAATAGTAATCTATCAGCAATA 13715 || || | | | | || | ||||||| ||||| |||||||||||||| | Sbjct 647932 GGGTTGTTAACCTTGTAGTGCTTCTTGCAACCTAAAGATAATAATAATCTATCAGCAACA 647873 Query 13716 AACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAGTTTTACA-GGAATTAT 13774 ||||||| ||||| |||| || || |||||||| | || | ||| || | Sbjct 647872 AACTCAACGTATTGGCACATCAATTCTGCGTTCATACCCAATAATGC-ACATGGTAAGGC 647814 Query 13775 ATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCTTTTATAATAATTGTAATAATCTC 13834 || || || || ||||| || || || || | ||||| | || ||| || Sbjct 647813 ATCCGTGAAGTATCTCTTTTCAATGTCAACTGCTTCAGTAATAATCTTGACAACAATTTC 647754 Query 13835 ATTAGAAGGAGGATATTTTAGATGTTTAAAAAT--TAAACACGCAAAATCACAATGAAGG 13892 | | |||| | || | |||| | ||| |||||| ||||||||| || | Sbjct 647753 TTCATTTGGAG--TGTTGTTCATGTGAGAGAATAATAAACAAGCAAAATCAGTGTGTAAA 647696 Query 13893 CCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGtttt 13952 || |||||||||| ||| | ||| || || || ||||| || ||||| | |||| ||| Sbjct 647695 CCTTCATCTCTACAAATCAATTCATTAGAGAAAGTTAAGCCCGGCATTAGGCCTCTCTTT 647636 Query 13953 tttAACCAAAATATTGCAGCAAATGACCCGGAAAAGAATATTCCCTCAACTGCAGCAAAC 14012 || |||||||| || | ||||||||| || || ||||| || || || || |||||||| Sbjct 647635 TTCAACCAAAAGATAGAAGCAAATGAACCAGAGAAGAAGATACCTTCGACAGCAGCAAAG 647576 Query 14013 GCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGATATCCATTTTCTAGCCCATTCA 14072 || | ||||| ||| | || | | |||| ||| |||||| | | ||||| ||| Sbjct 647575 GCAACTAATCTTTCGGCGAATAAGCCATTTTCGTTGTTCATCCATCTCATGGCCCAGTCA 647516 Query 14073 GAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAAATATTCCTTCTCTTTA 14132 | |||| || || || || || ||||||||||| ||||| | || ||| || Sbjct 647515 GCCTTTTCCTTGATGCAAGGAATAGTCTCAATAGCATTGAATAAGAAGTCAGCCTCCTTT 647456 Query 14133 G--TACTTGAAAT--GTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTC 14188 | | ||| | || || | |||||||| | || || |||||||||| |||||||| Sbjct 647455 GGATCCTTAACATAGGTGTCGATCAATAA-TGAG---TAAGTTTCAGAGTGGATGTTTTC 647400 Query 14189 CATAGCTATCTGAAAACCATAAAAGCATCTAGCTTCCGACCATTGTACTTCCGAGTAAAA 14248 ||| ||||| ||||| || || || | ||||| | ||| ||||| | |||| Sbjct 647399 CATCATGATCTGGAAACCGTAGAAACACTTGGCTTCTGGAATTTGGACTTCGGCAGAAAA 647340 Query 14249 TCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGCAAAAAATGCCAATATGTT 14308 |||| |||| || || ||||| ||||| || |||||||| || || || | | Sbjct 647339 GTTTTCAACCAAGTTCTCGTTAACAATACCGTCGGAGGCTGCAAAGAAAGCTAAAACTCT 647280 Query 14309 TTTAAT--AAAGTATTGCTC-TTCATTGTTGAGTTTTTTCCAATCGGATAA--ATCCTTA 14363 | ||| ||| | || | | |||||| || ||||| || || | |||||| Sbjct 647279 TGAAATGAAAAATCTTTCGCTTTCATTTAATCTGTTGTTCCAGTC--ATGAGTATCCTTT 647222 Query 14364 GAAAGATCTACTTCATCAACTGTCCAAAAACTAGCGACAGCTTTTTTATACATTACCCAT 14423 || | ||| | ||| || | ||||| ||| ||| |||| || || |||||| ||| Sbjct 647221 GATAAATCAATTTCTTCTGCAGTCCAGAAAGAAGCTTCAGCCTTCTTGTACATTTGCCAG 647162 Query 14424 ATTTCTT--TATATAATATAGGAAAAACTACAAATCT 14458 ||||| | ||| |||| | |||| || |||||||| Sbjct 647161 ATTTCATGGTATTTAAT-TGGGAACAA-AACAAATCT 647127 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 479727808108800