Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ogataea_20methanolica_20[genbank_20GCA_5F001600755.1_202016-03-01] 32 sequences; 15,086,366 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq5 251 7e-62 >seq5 Length=1013952 Score = 251 bits (278), Expect = 7e-62 Identities = 595/880 (68%), Gaps = 29/880 (3%) Strand=Plus/Minus Query 13384 ACTCTTTTTTCAAAAAAGTTAGTTTTACCTTCCAGTGATATATTTTCCATAAAATCGAAT 13443 ||||| |||||||| ||||| || ||||| | | || |||||||||||||| |||||| Sbjct 647992 ACTCTCTTTTCAAAGAAGTTGGTCTTACCAGCTAAAGAAATATTTTCCATAAAGTCGAAT 647933 Query 13444 GGATTTGTTGACATAA-ACACTTTATCACAACCTAGTTCTAATAATAATCTATCAGCAAT 13502 || || ||| || | | || | ||||||| |||||||||||||||||||| Sbjct 647932 GGGTT-GTTAACCTTGTAGTGCTTCTTGCAACCTAAAGATAATAATAATCTATCAGCAAC 647874 Query 13503 AAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAGTTTTACA-GGAATTA 13561 |||||||| ||||| |||| || || |||||||| | || | ||| || | Sbjct 647873 AAACTCAACGTATTGGCACATCAATTCTGCGTTCATACCCAATAATGC-ACATGGTAAGG 647815 Query 13562 TATTAGTTAAAAATTCTTTTTCTATAGACACAGCCTCGTTTATAATAATCTT---AATAA 13618 || || || || ||||| || || || || | ||||||||| || || Sbjct 647814 CATCCGTGAAGTATCTCTTTTCAATGTCAACTGCTTCAGT---AATAATCTTGACAACAA 647758 Query 13619 TGTCATTAGAAGGAGGATATTTTAGATGTTTAAAAAT--TAAACACGCAAAATCACAATG 13676 | || | | |||| | || | |||| | ||| |||||| ||||||||| || Sbjct 647757 TTTCTTCATTTGGAG--TGTTGTTCATGTGAGAGAATAATAAACAAGCAAAATCAGTGTG 647700 Query 13677 AAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCG 13736 | || |||||||||| ||| | ||| || || || ||||| || ||||| | |||| Sbjct 647699 TAAACCTTCATCTCTACAAATCAATTCATTAGAGAAAGTTAAGCCCGGCATTAGGCCTCT 647640 Query 13737 tttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGC 13796 ||||| |||||||| || | ||| ||||| || || ||||| || || || || ||||| Sbjct 647639 CTTTTTCAACCAAAAGATAGAAGCAAATGAACCAGAGAAGAAGATACCTTCGACAGCAGC 647580 Query 13797 AAACGCTATTAGTCGTTCTCCAAACGATGCTTTTTTGTTTGATATCCATTTTCTAGCCCA 13856 ||| || | || || ||| | || | | |||| ||| |||||| | | ||||| Sbjct 647579 AAAGGCAACTAATCTTTCGGCGAATAAGCCATTTTCGTTGTTCATCCATCTCATGGCCCA 647520 Query 13857 TTCAGAtttttttttAATAAAATCCATTGTTTCGATTGCATTGAATAAATGTTCCTTCTC 13916 |||| |||| || || || || || || || ||||||||||| || ||| Sbjct 647519 GTCAGCCTTTTCCTTGATGCAAGGAATAGTCTCAATAGCATTGAATAAGAAGTCAGCCTC 647460 Query 13917 TTTAG--TACTTGAAAT--GTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGT 13972 || | | ||| | || || | |||||||| | || || |||||||||| |||| Sbjct 647459 CTTTGGATCCTTAACATAGGTGTCGATCAATAA-TGAG---TAAGTTTCAGAGTGGATGT 647404 Query 13973 TTTCTATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCATTGTACCTCCGAGT 14032 |||| || ||||| ||||| || ||||| | ||||||| ||| || || | Sbjct 647403 TTTCCATCATGATCTGGAAACCGTAGAAACACTTGGCTTCTGGAATTTGGACTTCGGCAG 647344 Query 14033 AAAATCTTTCTGCCAAGTTTTCATTAACAATACCATCACTAGCTGCAAAAAATGCCAATA 14092 |||| |||| ||||||| || ||||||||||| || |||||||| || || || | Sbjct 647343 AAAAGTTTTCAACCAAGTTCTCGTTAACAATACCGTCGGAGGCTGCAAAGAAAGCTAAAA 647284 Query 14093 TGTTTTTAAT--AAAGTATTGCTC-TTCATTGTTGAGTTTTTTCCAATCGGCTAAATCCT 14149 || ||| ||| | || | | |||||| || ||||| || ||||| Sbjct 647283 CTCTTGAAATGAAAAATCTTTCGCTTTCATTTAATCTGTTGTTCCAGTCATGAGTATCCT 647224 Query 14150 TAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCGACAGCTTTTTTATACATTACCC 14209 | || | ||| | ||| || | ||||| ||| ||| |||| || || |||||| || Sbjct 647223 TTGATAAATCAATTTCTTCTGCAGTCCAGAAAGAAGCTTCAGCCTTCTTGTACATTTGCC 647164 Query 14210 ATATTTCTT--TATATAATATAGGAAAAACTACAAATCTT 14247 | ||||| | ||| |||| | |||| || ||||||||| Sbjct 647163 AGATTTCATGGTATTTAAT-TGGGAACAA-AACAAATCTT 647126 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478588608564480