Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ogataea_20methanolica_20[genbank_20GCA_5F001600755.1_202016-03-01]
32 sequences; 15,086,366 total letters
Query= NC_004003.1
Length=149599
Score E
Sequences producing significant alignments: (Bits) Value
seq5 251 7e-62
>seq5
Length=1013952
Score = 251 bits (278), Expect = 7e-62
Identities = 595/880 (68%), Gaps = 29/880 (3%)
Strand=Plus/Minus
Query 13384 ACTCTTTTTTCAAAAAAGTTAGTTTTACCTTCCAGTGATATATTTTCCATAAAATCGAAT 13443
||||| |||||||| ||||| || ||||| | | || |||||||||||||| ||||||
Sbjct 647992 ACTCTCTTTTCAAAGAAGTTGGTCTTACCAGCTAAAGAAATATTTTCCATAAAGTCGAAT 647933
Query 13444 GGATTTGTTGACATAA-ACACTTTATCACAACCTAGTTCTAATAATAATCTATCAGCAAT 13502
|| || ||| || | | || | ||||||| ||||||||||||||||||||
Sbjct 647932 GGGTT-GTTAACCTTGTAGTGCTTCTTGCAACCTAAAGATAATAATAATCTATCAGCAAC 647874
Query 13503 AAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAGTTTTACA-GGAATTA 13561
|||||||| ||||| |||| || || |||||||| | || | ||| || |
Sbjct 647873 AAACTCAACGTATTGGCACATCAATTCTGCGTTCATACCCAATAATGC-ACATGGTAAGG 647815
Query 13562 TATTAGTTAAAAATTCTTTTTCTATAGACACAGCCTCGTTTATAATAATCTT---AATAA 13618
|| || || || ||||| || || || || | ||||||||| || ||
Sbjct 647814 CATCCGTGAAGTATCTCTTTTCAATGTCAACTGCTTCAGT---AATAATCTTGACAACAA 647758
Query 13619 TGTCATTAGAAGGAGGATATTTTAGATGTTTAAAAAT--TAAACACGCAAAATCACAATG 13676
| || | | |||| | || | |||| | ||| |||||| ||||||||| ||
Sbjct 647757 TTTCTTCATTTGGAG--TGTTGTTCATGTGAGAGAATAATAAACAAGCAAAATCAGTGTG 647700
Query 13677 AAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCG 13736
| || |||||||||| ||| | ||| || || || ||||| || ||||| | ||||
Sbjct 647699 TAAACCTTCATCTCTACAAATCAATTCATTAGAGAAAGTTAAGCCCGGCATTAGGCCTCT 647640
Query 13737 tttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGC 13796
||||| |||||||| || | ||| ||||| || || ||||| || || || || |||||
Sbjct 647639 CTTTTTCAACCAAAAGATAGAAGCAAATGAACCAGAGAAGAAGATACCTTCGACAGCAGC 647580
Query 13797 AAACGCTATTAGTCGTTCTCCAAACGATGCTTTTTTGTTTGATATCCATTTTCTAGCCCA 13856
||| || | || || ||| | || | | |||| ||| |||||| | | |||||
Sbjct 647579 AAAGGCAACTAATCTTTCGGCGAATAAGCCATTTTCGTTGTTCATCCATCTCATGGCCCA 647520
Query 13857 TTCAGAtttttttttAATAAAATCCATTGTTTCGATTGCATTGAATAAATGTTCCTTCTC 13916
|||| |||| || || || || || || || ||||||||||| || |||
Sbjct 647519 GTCAGCCTTTTCCTTGATGCAAGGAATAGTCTCAATAGCATTGAATAAGAAGTCAGCCTC 647460
Query 13917 TTTAG--TACTTGAAAT--GTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGT 13972
|| | | ||| | || || | |||||||| | || || |||||||||| ||||
Sbjct 647459 CTTTGGATCCTTAACATAGGTGTCGATCAATAA-TGAG---TAAGTTTCAGAGTGGATGT 647404
Query 13973 TTTCTATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCATTGTACCTCCGAGT 14032
|||| || ||||| ||||| || ||||| | ||||||| ||| || || |
Sbjct 647403 TTTCCATCATGATCTGGAAACCGTAGAAACACTTGGCTTCTGGAATTTGGACTTCGGCAG 647344
Query 14033 AAAATCTTTCTGCCAAGTTTTCATTAACAATACCATCACTAGCTGCAAAAAATGCCAATA 14092
|||| |||| ||||||| || ||||||||||| || |||||||| || || || |
Sbjct 647343 AAAAGTTTTCAACCAAGTTCTCGTTAACAATACCGTCGGAGGCTGCAAAGAAAGCTAAAA 647284
Query 14093 TGTTTTTAAT--AAAGTATTGCTC-TTCATTGTTGAGTTTTTTCCAATCGGCTAAATCCT 14149
|| ||| ||| | || | | |||||| || ||||| || |||||
Sbjct 647283 CTCTTGAAATGAAAAATCTTTCGCTTTCATTTAATCTGTTGTTCCAGTCATGAGTATCCT 647224
Query 14150 TAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCGACAGCTTTTTTATACATTACCC 14209
| || | ||| | ||| || | ||||| ||| ||| |||| || || |||||| ||
Sbjct 647223 TTGATAAATCAATTTCTTCTGCAGTCCAGAAAGAAGCTTCAGCCTTCTTGTACATTTGCC 647164
Query 14210 ATATTTCTT--TATATAATATAGGAAAAACTACAAATCTT 14247
| ||||| | ||| |||| | |||| || |||||||||
Sbjct 647163 AGATTTCATGGTATTTAAT-TGGGAACAA-AACAAATCTT 647126
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478588608564480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |