Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ogataea_20methanolica_20[genbank_20GCA_5F001600755.1_202016-03-01]
32 sequences; 15,086,366 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq5 412 5e-110
seq1 93.3 6e-14
>seq5
Length=1013952
Score = 412 bits (456), Expect = 5e-110
Identities = 1437/2213 (65%), Gaps = 63/2213 (3%)
Strand=Plus/Plus
Query 70801 GTAAACTGAATGGGAGAGGATGCGGCTTTCGTACGTAGATAGTACATGCCTGTTTTTAGA 70860
|| || ||||| | || || || |||| || | || |||||||| || || || | |
Sbjct 376721 GTGAATTGAATAGCAGCAGAAGCAGCTTGTGTTCTTAAGTAGTACATACCAGTCTTCAAA 376780
Query 70861 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGA-ATAGCTAGGATCGGCTAT 70919
|| |||| ||||| || ||||| ||||| || |||| | || || ||
Sbjct 376781 CCCTTCTTCCAACCGTAGAAGTGCATGGACGTTAACTTACCCATAGTTGGGTTCTT-TAA 376839
Query 70920 GTGAATATTCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTAT 70979
|||||| ||||| || ||| |||||| ||| | || || || || |||||||| | ||
Sbjct 376840 GTGAATGTTCATTGATTGAGATTGATCAATGTAAGCACCTCTATCAGCAGCCATATCAAT 376899
Query 70980 GATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAG 71039
|| ||||||||| ||||||||| | || || || | | ||| | || |||||||
Sbjct 376900 AATGCTCTTTTGTGAAATTTCCCAGACTGTCTTGTATAATTTCTTTAATTCGTCTGGAAT 376959
Query 71040 GTTTG-TA--TTCTGAATGGATCCACCATCTGCAATAATCCTATTTTTGATCTCTTCATT 71096
||| | || || ||||| || ||| |||| ||| || ||| || || | || |
Sbjct 376960 GTTCGGTAAGTTTTGAATAGAGCCATTATCTTGAATGATGAAATTCTTCATAGCATCGCT 377019
Query 71097 CCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACTACTTGAAATTCTCC 71156
||||| | || |||| |||| || | || || || || | ||| ||||| ||
Sbjct 377020 CCATAGACCTAAATCAACTAAATCTCTTAGCAAATATGGGTTGACAATTTGGAATTCACC 377079
Query 71157 AGACAATACTCTACGAGTGTAAATATTACTGGTATACGGTTCCACTGACTCATTATTTCC 71216
| | ||||| | | |||||| ||| || || ||||| | |||| || | ||
Sbjct 377080 TGCTAGAACTCTTCTTGAGTAAATGTTAGAAGTGTATGGTTCGAAGCACTCGTTGTAACC 377139
Query 71217 CAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAGACTATTTCTAAGACC 71276
||||||||| | |||||| ||||| ||||| || |||| ||||| | ||||| | |||
Sbjct 377140 CAAAATTTGTGAAGTTGAAGCAGTAGGCATTGGAGCCAGCAATAAAGAGTTTCTCAAACC 377199
Query 71277 ATGTGATCGGATTTTAT---CTTTTAGAGATTCCCAATTCCAAAGATCCGATGGTACAAC 71333
||| | ||| || | |||| | |||| |||||| ||| | ||| | ||| | |
Sbjct 377200 --GTGCTTGGAAATTCTTTCCTTTAATAGAT-CCCAATCCCATAAATCAGTTGG--CTTC 377254
Query 71334 NNNNNNNNNNNNNNNNNNNNNNATG--CCGTTACTAGCGTATGATCCT-GCATATGTATC 71390
|| || | | ||| || ||| | | || | ||
Sbjct 377255 TTACCCCATAAGTCGAATTGTAATAGACCTTGAGAAGCTGGAGAACCTTGGAAAT-TCTC 377313
Query 71391 GTATGGTCCTTCTTTTTCGGCTAGTTCACAACTCGCCTCTAATGCTCCATAATAAATGGT 71450
||||| || ||| | | |||| || ||||| || ||| || |||||
Sbjct 377314 ATATGGCCCATCTAAGATTGACAATTCAATCGAAGCTTCTAAAGCAGCATGGTACATGGT 377373
Query 71451 TTCGAAAATCTTCTTATTGAGATCTTGTGCTTCCGGGCTATCAAATGGATAATTT-AAGA 71509
||| ||||| | | || | || || || ||| ||||||||| |||| | ||
Sbjct 377374 TTCAAAAATTTGAATGTTCAAGTCCCTGGCCTCTGGGGAATCAAATGG-TAATCTCAATT 377432
Query 71510 GAATAAACGCGTCTGCTAATCCTTGAACGCCAATACCGATAGGTCTGTGTCTCTTATTAG 71569
| || || |||| || || |||||||| |||| | | || ||||||| | || | ||||
Sbjct 377433 GCATGAAAACGTCAGCCAAACCTTGAACACCAACAGCAATTGGTCTGTTTTTCATGTTAG 377492
Query 71570 AAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTGA 71629
| || ||| ||| || ||| ||||| || | || || || | || | | |||| |
Sbjct 377493 ATGTTCTAGCCTCTTCAACAGGGTAATAGTTTCTGTCAATGATCATGTTCA-AGTTCTTA 377551
Query 71630 -CTATTACTTTGACCACATCCTTTAGTTTGAGAAAATCAAATCT------CCC---ATCT 71679
| | || || || || | ||||| ||| | | | | | | |||
Sbjct 377552 GCAACAACCTTAGTAACTTCATGCAGTTTTTCAAAGTTATACCATGATGACTCTGAATCC 377611
Query 71680 -ATT--ACAAACACGTTCAAGGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCA 71736
||| || || | ||| || || || || || ||||| ||||| || || | |
Sbjct 377612 GATTCGACGAATGCAGGCAAAGCCACGGAAGCTAGGTTACAGACGGCAACTTCTTCTGGT 377671
Query 71737 TCGGCATATTGTATAATTTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGT 71796
|| ||||| | ||||||| ||| | ||| |||| || || || || || | |
Sbjct 377672 GAGGAATATTCAACAATTTCACAGCACAAGTTAGATGACTTAATAGTACCCAAGTTCTTT 377731
Query 71797 TGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATAAACGGAGTACCAGTTTCAATC 71856
|| || |||| ||||| |||||||| || | ||||| ||||| || ||||| |
Sbjct 377732 TGGTTGGATTTTTCATTACAAGCATCCTTGTATAACATAAATGGAGTGCCTGTTTCCGTT 377791
Query 71857 TGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATATTCTTGTATCTCTT- 71915
|| | ||||| ||| || | ||| | | ||||||| | | | | || ||||
Sbjct 377792 TGTGCTTCTAAAATAGCATACCATAGCTTTTGAGCCTTGACAGTTTG--TCTACCTCTGC 377849
Query 71916 -TTCTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAGCATTGTCTAATC 71974
|||| ||| |||| |||||||| ||| || || || || || | || ||| |
Sbjct 377850 CTTCTTCTTCATATTTGGTATATAAAGCTTCAAATTCATCACCGTAAAGTTCGTGTAAAC 377909
Query 71975 CAGGACATTCATTCGGACACATCAATGACCACTCTCCATCATCATTTACTCGTTTCATAA 72034
|||| ||| || | | || | ||| | ||| | | |||| |||||||
Sbjct 377910 CAGGGGCTTCGGAAGGGGAGAATAAAGTCCATTGAGCATTCTGCTCAACTCTCTTCATAA 377969
Query 72035 AGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTG 72094
| | ||| |||||||| | || ||||||||||| | ||| ||| || || ||
Sbjct 377970 ACAAATCTGGAATCCATAAGGCCGGGAATAGATCTCTAGCTCTGATCTCTTCCTTACCGT 378029
Query 72095 TATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGG 72154
||||||| ||| ||||| ||| | | |||||||||||||| ||||| | ||||| |
Sbjct 378030 GATTCTTTCTAATATCGATGAAATCAAAGATATCAGAATGCCATGGTTCAATGTATAAAG 378089
Query 72155 CCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAA 72214
| | | | || || | |||||| || ||||| || | ||||| || ||||| || |||
Sbjct 378090 CGAAAGCACCTGGTCTTTTGTTACCCCCCTGGTCAACATATCTTGCAGTGTTGTTGAAAA 378149
Query 72215 CTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCAC 72274
|||| | ||||||||| ||||| || || | |||||| || |||| ||||| |||
Sbjct 378150 CTCTAATCATTGGAATGATACCGTTAGAAGTACCATTAGTACCGGCAATATATGAACCAG 378209
Query 72275 TGGCACGAATATTGCTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGC 72334
| | | ||| || ||| || ||| || || || || | || || || || || |
Sbjct 378210 TAGATCTAATGTTATGAATGTGTAAACCAATACCACCAGCAGTCTTGGAAATCAAAGCAC 378269
Query 72335 ATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAAC 72394
|| | || || |||||||| || || || ||| ||| || |||| || || ||| |
Sbjct 378270 ATTGCTTCAAAGTATCATAAATACCATCGATAGAATCGTCTTTCATAGCAACTAAAAAGC 378329
Query 72395 AGCTAGACATTTG---GTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCG 72451
| ||||||||| |||| | ||| || ||||||||||| || || |||||||| |
Sbjct 378330 ATGAAGACATTTGTGCGTGAGG---AGTACCAGCATTAAATAATGTTGGTGAAGCGTGAG 378386
Query 72452 TAAACCATTTTTCAGACA-GTAGATTGTACGTCTCAAT-AGCTGATTCTATA-TCCCATT 72508
|||| || |||| |||| |||| || || || || || | || | | ||| | ||
Sbjct 378387 TAAAGTATCTTTCTGACATGTAG-TTATAAGTTTCTATGACCTTA-GCAATATTATCACC 378444
Query 72509 GATGTATTCCTACCGCGACACGCATTAACATATGCTGAGGTCTTTCAACGATCTTGTTAT 72568
| || || || | | || | ||| | | ||||| ||||||||| | | |
Sbjct 378445 G-TGGATACCAATAGAAACTCTCATAACTAAGTGCTGTGGTCTTTCAGCAACAGCACCGT 378503
Query 72569 TTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGT 72628
| ||| |||| || || ||| | |||||||| |||||||| ||||||||||| || || |
Sbjct 378504 TAATTCTCAATAAATATGATCTCTCCAAAGTCTTAAAACCGAAATAGTTGTAGGAGAAAT 378563
Query 72629 CTCGTTCGTAAATAATAACCGAATTGAGTTTATCCTTATATTTGTTAACTATATCCATGG 72688
| || ||||||| |||| | ||||| | || ||| ||| || | ||| || || |
Sbjct 378564 CACGGTCGTAAACAATAGCAGAATTCAATTCATCACTATGCTTTTGAACGATGTC----G 378619
Query 72689 TGA---TACTT-GAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAAT 72744
| | | ||| || || || |||| | | ||||| || || || | ||| | ||
Sbjct 378620 TAAACTTCCTTAGAGATCATTGGAGCCGGCTGACCATTCTTTGGGTTGATATAAGTATAT 378679
Query 72745 AAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCT 72804
|| | || || ||| | |||| |||| |||| | |||||||| || || | |||
Sbjct 378680 AATTGTTCAATAACTGAAGAAAATTGTTTGGTTGTCTGCTTGTGTAAGTTAGAAATAGCT 378739
Query 72805 ATTCTGGCGGCTAGAATGGCATAATCTGGATG-TTG--TGTAGTACAAGTGGCTGCTATT 72861
|||||||| |||| ||||||||||||| || || ||| || || || || ||
Sbjct 378740 ATTCTGGCAGCTAAGGTGGCATAATCTGGGTGAATGGTTGTCATATAA---GCAGCAGTT 378796
Query 72862 TCTGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATATATTCCTTGGATAACC 72921
|| || |||| | |||||||| | || || || || ||||| | || |||||
Sbjct 378797 TCAGCAGCCAAGTTATCCAATTCGATAGTGGTAACACCGTTATAAACACCAGAAATAACA 378856
Query 72922 TTCATAGCTATTTTAATAGGATCTATATGATCAGTGTTTAAGCCATAACATAA 72974
| || ||| || || ||| | ||| | | || ||| || ||||||||
Sbjct 378857 CGCTGAGTAATTGCAACAGCATCCACATGTTTTGGGTCTAAACCGTAACATAA 378909
Score = 286 bits (316), Expect = 5e-72
Identities = 428/600 (71%), Gaps = 12/600 (2%)
Strand=Plus/Minus
Query 42062 AAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTG 42121
||||| || ||||| ||| | ||| |||||||||| ||| ||||| || || || ||
Sbjct 647719 AAACAAGCAAAATCAGTGTGTAAACCTTCATCTCTACAAATCAATTCATTAGAGAAAGTT 647660
Query 42122 AGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAG 42181
| || ||||||||||| | |||||| | |||||| ||||| |||||||| ||||| |||
Sbjct 647659 AAGCCCGGCATTAGGCCTCTCTTTTTCAACCAAAAGATAGAAGCAAATGAACCAGAGAAG 647600
Query 42182 AAGATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCC--ATAACCGGCACTGTC-A 42238
||||| ||||| || || |||||||||| | ||| || | |||| | || | ||
Sbjct 647599 AAGATACCTTCGACAGCAGCAAAGGCAACTAATCTTTCGGCGAATAA--GCCATTTTCGT 647542
Query 42239 TGT--ATCCA-CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATG 42295
||| ||||| || || ||||| || ||||| | || | ||||| || || || ||
Sbjct 647541 TGTTCATCCATCTCATG-GCCCAGTCAGCCTTTTCCTTGATGCAAGGAATAGTCTCAATA 647483
Query 42296 GCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCGATCAAAAGACTA 42355
||||| || | ||| || || ||| |||||||| || |||||||| |
Sbjct 647482 GCATTGAATAAGAAGTCAGCCTCCTTTGGATCCTTAACATAGGTGTCGATCAATAATGAG 647423
Query 42356 TACATTTCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCG 42415
|| |||| || || |||||||| || ||||| || ||||||||||| |||| ||
Sbjct 647422 TAAGTTTCAGAGTGGATGTTTTCCATCATGATCTGGAAACCGTAGAAACACTTGGCTTCT 647363
Query 42416 GTAACCTGTACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTG 42475
| || || ||||| | | |||| |||| | || || ||||| || || ||||| |
Sbjct 647362 GGAATTTGGACTTCGGCAGAAAAGTTTTCAACCAAGTTCTCGTTAACAATACCGTCGGAG 647303
Query 42476 GCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCCGGTGTTAAT---TTA 42532
|||||||| || || || || | || ||| || ||||| ||||| ||
Sbjct 647302 GCTGCAAAGAAAGCTAAAACTCTTGAAATGAAAAATCTTTCGCTTTCATTTAATCTGTTG 647243
Query 42533 TTCCAATCATTGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCT 42592
||||| |||| |||| || |||| ||| | ||||||| | ||||| || || |||||
Sbjct 647242 TTCCAGTCATGAGTATCCTTTGATAAATCAATTTCTTCTGCAGTCCAGAAAGAAGCTTCA 647183
Query 42593 GCCTTTTTATACATATTCCAGATATCATGATATTGAATTGGGAAAATAACAAATCTATTT 42652
||||| || ||||| | |||||| ||||| |||| ||||||||| | ||||||||| |||
Sbjct 647182 GCCTTCTTGTACATTTGCCAGATTTCATGGTATTTAATTGGGAACAAAACAAATCTTTTT 647123
>seq1
Length=3681944
Score = 93.3 bits (102), Expect = 6e-14
Identities = 343/524 (65%), Gaps = 15/524 (3%)
Strand=Plus/Plus
Query 70801 GTAAACTGAATGGGAGAGGATGCGGCTTTCGTACGTAGATAGTACATGCCTGTTTTTAGA 70860
|| |||| || | ||| | ||||| | || | || |||||| || || ||||||||
Sbjct 1059241 GTGAACTTGATTGCAGAAGCAGCGGCCTGGGTTCTTAAATAGTAAATACCAGTTTTTAGT 1059300
Query 70861 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGA-ATAGCTAGGATCGGCTAT 70919
|| |||| | ||||| |||||||| || || || || || | | || || ||
Sbjct 1059301 CCTTTCTTCCAAGCATAAAAGTGCATACTTGTAAGCTTCGACATTGTT-GGTTCCCTCAT 1059359
Query 70920 GTGAATA--TTCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTT 70977
| |||| || | || ||| ||||| ||||| | | | | ||| || | ||| |
Sbjct 1059360 G--AATAAGTTTAATGATTGAGAATGATCAATGAATGGTGCACGGTCAGCTGACATATCA 1059417
Query 70978 ATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGA 71037
|| | |||||| ||||||||||||| |||||||| | ||||||||| | |||
Sbjct 1059418 ATTAAATGCTTTTGAGGAATTTCCCAAACTGTTTTATACAAAGACTTAATATCATTTGGT 1059477
Query 71038 AGGTTTGTATTC---TGAATGGATCCACCATCTGC-AATAATCCTATTTTTGATCTCTTC 71093
| | || || ||||| || || | ||| || ||| ||| ||||| | ||
Sbjct 1059478 ATTTCATTAATCAATTGAATTGACCCGTTGT-TGCTTATTATCTGATTCTTGATATTCTC 1059536
Query 71094 ATTCCATAATTTTCTCTCGGTTAAAAC-TCTAAGGAGATGAGGATTAACTACTTGAAATT 71152
|||||||| || ||| ||||| | ||| | | || |||||| | |||||| |
Sbjct 1059537 ATTCCATAGATTGAGTTCGATTAAATCGTCT-ACCAAATAGCTATTAACGATTTGAAACT 1059595
Query 71153 CTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATACGGTTCCACTGACTCATTAT 71212
| || || || ||||| | |||||||||||| || || || | | ||| |
Sbjct 1059596 CACCGGATAAGACTCTTCTTGTGTAAATATTAGATGTGATTGGCTCAAAACATTCAGTGA 1059655
Query 71213 TTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAGACTA-TTTCTA 71271
||| | || || | ||| || ||||| ||||| || ||||| | || | |||||
Sbjct 1059656 ATCCTAGTATCTGTGAAGTCGAGGCAGTAGGCATTAAGGCAACCAACA-ACGAGTTTCTG 1059714
Query 71272 AGACCATGTGATCGGATTTTATCTTTTAGAGATTCCCAATTCCA 71315
| ||| | ||| ||||| |||| | || ||||||| |||
Sbjct 1059715 ACACCGTTCGATTTTATTTTCGCTTTCAATGAATCCCAATCCCA 1059758
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 671138931544320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |