Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ogataea_20methanolica_20[genbank_20GCA_5F001600755.1_202016-03-01] 32 sequences; 15,086,366 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq5 412 5e-110 seq1 93.3 6e-14 >seq5 Length=1013952 Score = 412 bits (456), Expect = 5e-110 Identities = 1437/2213 (65%), Gaps = 63/2213 (3%) Strand=Plus/Plus Query 70801 GTAAACTGAATGGGAGAGGATGCGGCTTTCGTACGTAGATAGTACATGCCTGTTTTTAGA 70860 || || ||||| | || || || |||| || | || |||||||| || || || | | Sbjct 376721 GTGAATTGAATAGCAGCAGAAGCAGCTTGTGTTCTTAAGTAGTACATACCAGTCTTCAAA 376780 Query 70861 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGA-ATAGCTAGGATCGGCTAT 70919 || |||| ||||| || ||||| ||||| || |||| | || || || Sbjct 376781 CCCTTCTTCCAACCGTAGAAGTGCATGGACGTTAACTTACCCATAGTTGGGTTCTT-TAA 376839 Query 70920 GTGAATATTCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTAT 70979 |||||| ||||| || ||| |||||| ||| | || || || || |||||||| | || Sbjct 376840 GTGAATGTTCATTGATTGAGATTGATCAATGTAAGCACCTCTATCAGCAGCCATATCAAT 376899 Query 70980 GATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAG 71039 || ||||||||| ||||||||| | || || || | | ||| | || ||||||| Sbjct 376900 AATGCTCTTTTGTGAAATTTCCCAGACTGTCTTGTATAATTTCTTTAATTCGTCTGGAAT 376959 Query 71040 GTTTG-TA--TTCTGAATGGATCCACCATCTGCAATAATCCTATTTTTGATCTCTTCATT 71096 ||| | || || ||||| || ||| |||| ||| || ||| || || | || | Sbjct 376960 GTTCGGTAAGTTTTGAATAGAGCCATTATCTTGAATGATGAAATTCTTCATAGCATCGCT 377019 Query 71097 CCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACTACTTGAAATTCTCC 71156 ||||| | || |||| |||| || | || || || || | ||| ||||| || Sbjct 377020 CCATAGACCTAAATCAACTAAATCTCTTAGCAAATATGGGTTGACAATTTGGAATTCACC 377079 Query 71157 AGACAATACTCTACGAGTGTAAATATTACTGGTATACGGTTCCACTGACTCATTATTTCC 71216 | | ||||| | | |||||| ||| || || ||||| | |||| || | || Sbjct 377080 TGCTAGAACTCTTCTTGAGTAAATGTTAGAAGTGTATGGTTCGAAGCACTCGTTGTAACC 377139 Query 71217 CAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAGACTATTTCTAAGACC 71276 ||||||||| | |||||| ||||| ||||| || |||| ||||| | ||||| | ||| Sbjct 377140 CAAAATTTGTGAAGTTGAAGCAGTAGGCATTGGAGCCAGCAATAAAGAGTTTCTCAAACC 377199 Query 71277 ATGTGATCGGATTTTAT---CTTTTAGAGATTCCCAATTCCAAAGATCCGATGGTACAAC 71333 ||| | ||| || | |||| | |||| |||||| ||| | ||| | ||| | | Sbjct 377200 --GTGCTTGGAAATTCTTTCCTTTAATAGAT-CCCAATCCCATAAATCAGTTGG--CTTC 377254 Query 71334 NNNNNNNNNNNNNNNNNNNNNNATG--CCGTTACTAGCGTATGATCCT-GCATATGTATC 71390 || || | | ||| || ||| | | || | || Sbjct 377255 TTACCCCATAAGTCGAATTGTAATAGACCTTGAGAAGCTGGAGAACCTTGGAAAT-TCTC 377313 Query 71391 GTATGGTCCTTCTTTTTCGGCTAGTTCACAACTCGCCTCTAATGCTCCATAATAAATGGT 71450 ||||| || ||| | | |||| || ||||| || ||| || ||||| Sbjct 377314 ATATGGCCCATCTAAGATTGACAATTCAATCGAAGCTTCTAAAGCAGCATGGTACATGGT 377373 Query 71451 TTCGAAAATCTTCTTATTGAGATCTTGTGCTTCCGGGCTATCAAATGGATAATTT-AAGA 71509 ||| ||||| | | || | || || || ||| ||||||||| |||| | || Sbjct 377374 TTCAAAAATTTGAATGTTCAAGTCCCTGGCCTCTGGGGAATCAAATGG-TAATCTCAATT 377432 Query 71510 GAATAAACGCGTCTGCTAATCCTTGAACGCCAATACCGATAGGTCTGTGTCTCTTATTAG 71569 | || || |||| || || |||||||| |||| | | || ||||||| | || | |||| Sbjct 377433 GCATGAAAACGTCAGCCAAACCTTGAACACCAACAGCAATTGGTCTGTTTTTCATGTTAG 377492 Query 71570 AAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTGA 71629 | || ||| ||| || ||| ||||| || | || || || | || | | |||| | Sbjct 377493 ATGTTCTAGCCTCTTCAACAGGGTAATAGTTTCTGTCAATGATCATGTTCA-AGTTCTTA 377551 Query 71630 -CTATTACTTTGACCACATCCTTTAGTTTGAGAAAATCAAATCT------CCC---ATCT 71679 | | || || || || | ||||| ||| | | | | | | ||| Sbjct 377552 GCAACAACCTTAGTAACTTCATGCAGTTTTTCAAAGTTATACCATGATGACTCTGAATCC 377611 Query 71680 -ATT--ACAAACACGTTCAAGGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCA 71736 ||| || || | ||| || || || || || ||||| ||||| || || | | Sbjct 377612 GATTCGACGAATGCAGGCAAAGCCACGGAAGCTAGGTTACAGACGGCAACTTCTTCTGGT 377671 Query 71737 TCGGCATATTGTATAATTTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGT 71796 || ||||| | ||||||| ||| | ||| |||| || || || || || | | Sbjct 377672 GAGGAATATTCAACAATTTCACAGCACAAGTTAGATGACTTAATAGTACCCAAGTTCTTT 377731 Query 71797 TGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATAAACGGAGTACCAGTTTCAATC 71856 || || |||| ||||| |||||||| || | ||||| ||||| || ||||| | Sbjct 377732 TGGTTGGATTTTTCATTACAAGCATCCTTGTATAACATAAATGGAGTGCCTGTTTCCGTT 377791 Query 71857 TGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATATTCTTGTATCTCTT- 71915 || | ||||| ||| || | ||| | | ||||||| | | | | || |||| Sbjct 377792 TGTGCTTCTAAAATAGCATACCATAGCTTTTGAGCCTTGACAGTTTG--TCTACCTCTGC 377849 Query 71916 -TTCTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAGCATTGTCTAATC 71974 |||| ||| |||| |||||||| ||| || || || || || | || ||| | Sbjct 377850 CTTCTTCTTCATATTTGGTATATAAAGCTTCAAATTCATCACCGTAAAGTTCGTGTAAAC 377909 Query 71975 CAGGACATTCATTCGGACACATCAATGACCACTCTCCATCATCATTTACTCGTTTCATAA 72034 |||| ||| || | | || | ||| | ||| | | |||| ||||||| Sbjct 377910 CAGGGGCTTCGGAAGGGGAGAATAAAGTCCATTGAGCATTCTGCTCAACTCTCTTCATAA 377969 Query 72035 AGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTG 72094 | | ||| |||||||| | || ||||||||||| | ||| ||| || || || Sbjct 377970 ACAAATCTGGAATCCATAAGGCCGGGAATAGATCTCTAGCTCTGATCTCTTCCTTACCGT 378029 Query 72095 TATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGG 72154 ||||||| ||| ||||| ||| | | |||||||||||||| ||||| | ||||| | Sbjct 378030 GATTCTTTCTAATATCGATGAAATCAAAGATATCAGAATGCCATGGTTCAATGTATAAAG 378089 Query 72155 CCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAA 72214 | | | | || || | |||||| || ||||| || | ||||| || ||||| || ||| Sbjct 378090 CGAAAGCACCTGGTCTTTTGTTACCCCCCTGGTCAACATATCTTGCAGTGTTGTTGAAAA 378149 Query 72215 CTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCAC 72274 |||| | ||||||||| ||||| || || | |||||| || |||| ||||| ||| Sbjct 378150 CTCTAATCATTGGAATGATACCGTTAGAAGTACCATTAGTACCGGCAATATATGAACCAG 378209 Query 72275 TGGCACGAATATTGCTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGC 72334 | | | ||| || ||| || ||| || || || || | || || || || || | Sbjct 378210 TAGATCTAATGTTATGAATGTGTAAACCAATACCACCAGCAGTCTTGGAAATCAAAGCAC 378269 Query 72335 ATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAAC 72394 || | || || |||||||| || || || ||| ||| || |||| || || ||| | Sbjct 378270 ATTGCTTCAAAGTATCATAAATACCATCGATAGAATCGTCTTTCATAGCAACTAAAAAGC 378329 Query 72395 AGCTAGACATTTG---GTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCG 72451 | ||||||||| |||| | ||| || ||||||||||| || || |||||||| | Sbjct 378330 ATGAAGACATTTGTGCGTGAGG---AGTACCAGCATTAAATAATGTTGGTGAAGCGTGAG 378386 Query 72452 TAAACCATTTTTCAGACA-GTAGATTGTACGTCTCAAT-AGCTGATTCTATA-TCCCATT 72508 |||| || |||| |||| |||| || || || || || | || | | ||| | || Sbjct 378387 TAAAGTATCTTTCTGACATGTAG-TTATAAGTTTCTATGACCTTA-GCAATATTATCACC 378444 Query 72509 GATGTATTCCTACCGCGACACGCATTAACATATGCTGAGGTCTTTCAACGATCTTGTTAT 72568 | || || || | | || | ||| | | ||||| ||||||||| | | | Sbjct 378445 G-TGGATACCAATAGAAACTCTCATAACTAAGTGCTGTGGTCTTTCAGCAACAGCACCGT 378503 Query 72569 TTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGT 72628 | ||| |||| || || ||| | |||||||| |||||||| ||||||||||| || || | Sbjct 378504 TAATTCTCAATAAATATGATCTCTCCAAAGTCTTAAAACCGAAATAGTTGTAGGAGAAAT 378563 Query 72629 CTCGTTCGTAAATAATAACCGAATTGAGTTTATCCTTATATTTGTTAACTATATCCATGG 72688 | || ||||||| |||| | ||||| | || ||| ||| || | ||| || || | Sbjct 378564 CACGGTCGTAAACAATAGCAGAATTCAATTCATCACTATGCTTTTGAACGATGTC----G 378619 Query 72689 TGA---TACTT-GAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAAT 72744 | | | ||| || || || |||| | | ||||| || || || | ||| | || Sbjct 378620 TAAACTTCCTTAGAGATCATTGGAGCCGGCTGACCATTCTTTGGGTTGATATAAGTATAT 378679 Query 72745 AAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCT 72804 || | || || ||| | |||| |||| |||| | |||||||| || || | ||| Sbjct 378680 AATTGTTCAATAACTGAAGAAAATTGTTTGGTTGTCTGCTTGTGTAAGTTAGAAATAGCT 378739 Query 72805 ATTCTGGCGGCTAGAATGGCATAATCTGGATG-TTG--TGTAGTACAAGTGGCTGCTATT 72861 |||||||| |||| ||||||||||||| || || ||| || || || || || Sbjct 378740 ATTCTGGCAGCTAAGGTGGCATAATCTGGGTGAATGGTTGTCATATAA---GCAGCAGTT 378796 Query 72862 TCTGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATATATTCCTTGGATAACC 72921 || || |||| | |||||||| | || || || || ||||| | || ||||| Sbjct 378797 TCAGCAGCCAAGTTATCCAATTCGATAGTGGTAACACCGTTATAAACACCAGAAATAACA 378856 Query 72922 TTCATAGCTATTTTAATAGGATCTATATGATCAGTGTTTAAGCCATAACATAA 72974 | || ||| || || ||| | ||| | | || ||| || |||||||| Sbjct 378857 CGCTGAGTAATTGCAACAGCATCCACATGTTTTGGGTCTAAACCGTAACATAA 378909 Score = 286 bits (316), Expect = 5e-72 Identities = 428/600 (71%), Gaps = 12/600 (2%) Strand=Plus/Minus Query 42062 AAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTG 42121 ||||| || ||||| ||| | ||| |||||||||| ||| ||||| || || || || Sbjct 647719 AAACAAGCAAAATCAGTGTGTAAACCTTCATCTCTACAAATCAATTCATTAGAGAAAGTT 647660 Query 42122 AGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAG 42181 | || ||||||||||| | |||||| | |||||| ||||| |||||||| ||||| ||| Sbjct 647659 AAGCCCGGCATTAGGCCTCTCTTTTTCAACCAAAAGATAGAAGCAAATGAACCAGAGAAG 647600 Query 42182 AAGATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCC--ATAACCGGCACTGTC-A 42238 ||||| ||||| || || |||||||||| | ||| || | |||| | || | || Sbjct 647599 AAGATACCTTCGACAGCAGCAAAGGCAACTAATCTTTCGGCGAATAA--GCCATTTTCGT 647542 Query 42239 TGT--ATCCA-CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATG 42295 ||| ||||| || || ||||| || ||||| | || | ||||| || || || || Sbjct 647541 TGTTCATCCATCTCATG-GCCCAGTCAGCCTTTTCCTTGATGCAAGGAATAGTCTCAATA 647483 Query 42296 GCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCGATCAAAAGACTA 42355 ||||| || | ||| || || ||| |||||||| || |||||||| | Sbjct 647482 GCATTGAATAAGAAGTCAGCCTCCTTTGGATCCTTAACATAGGTGTCGATCAATAATGAG 647423 Query 42356 TACATTTCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCG 42415 || |||| || || |||||||| || ||||| || ||||||||||| |||| || Sbjct 647422 TAAGTTTCAGAGTGGATGTTTTCCATCATGATCTGGAAACCGTAGAAACACTTGGCTTCT 647363 Query 42416 GTAACCTGTACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTG 42475 | || || ||||| | | |||| |||| | || || ||||| || || ||||| | Sbjct 647362 GGAATTTGGACTTCGGCAGAAAAGTTTTCAACCAAGTTCTCGTTAACAATACCGTCGGAG 647303 Query 42476 GCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCCGGTGTTAAT---TTA 42532 |||||||| || || || || | || ||| || ||||| ||||| || Sbjct 647302 GCTGCAAAGAAAGCTAAAACTCTTGAAATGAAAAATCTTTCGCTTTCATTTAATCTGTTG 647243 Query 42533 TTCCAATCATTGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCT 42592 ||||| |||| |||| || |||| ||| | ||||||| | ||||| || || ||||| Sbjct 647242 TTCCAGTCATGAGTATCCTTTGATAAATCAATTTCTTCTGCAGTCCAGAAAGAAGCTTCA 647183 Query 42593 GCCTTTTTATACATATTCCAGATATCATGATATTGAATTGGGAAAATAACAAATCTATTT 42652 ||||| || ||||| | |||||| ||||| |||| ||||||||| | ||||||||| ||| Sbjct 647182 GCCTTCTTGTACATTTGCCAGATTTCATGGTATTTAATTGGGAACAAAACAAATCTTTTT 647123 >seq1 Length=3681944 Score = 93.3 bits (102), Expect = 6e-14 Identities = 343/524 (65%), Gaps = 15/524 (3%) Strand=Plus/Plus Query 70801 GTAAACTGAATGGGAGAGGATGCGGCTTTCGTACGTAGATAGTACATGCCTGTTTTTAGA 70860 || |||| || | ||| | ||||| | || | || |||||| || || |||||||| Sbjct 1059241 GTGAACTTGATTGCAGAAGCAGCGGCCTGGGTTCTTAAATAGTAAATACCAGTTTTTAGT 1059300 Query 70861 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGA-ATAGCTAGGATCGGCTAT 70919 || |||| | ||||| |||||||| || || || || || | | || || || Sbjct 1059301 CCTTTCTTCCAAGCATAAAAGTGCATACTTGTAAGCTTCGACATTGTT-GGTTCCCTCAT 1059359 Query 70920 GTGAATA--TTCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTT 70977 | |||| || | || ||| ||||| ||||| | | | | ||| || | ||| | Sbjct 1059360 G--AATAAGTTTAATGATTGAGAATGATCAATGAATGGTGCACGGTCAGCTGACATATCA 1059417 Query 70978 ATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGA 71037 || | |||||| ||||||||||||| |||||||| | ||||||||| | ||| Sbjct 1059418 ATTAAATGCTTTTGAGGAATTTCCCAAACTGTTTTATACAAAGACTTAATATCATTTGGT 1059477 Query 71038 AGGTTTGTATTC---TGAATGGATCCACCATCTGC-AATAATCCTATTTTTGATCTCTTC 71093 | | || || ||||| || || | ||| || ||| ||| ||||| | || Sbjct 1059478 ATTTCATTAATCAATTGAATTGACCCGTTGT-TGCTTATTATCTGATTCTTGATATTCTC 1059536 Query 71094 ATTCCATAATTTTCTCTCGGTTAAAAC-TCTAAGGAGATGAGGATTAACTACTTGAAATT 71152 |||||||| || ||| ||||| | ||| | | || |||||| | |||||| | Sbjct 1059537 ATTCCATAGATTGAGTTCGATTAAATCGTCT-ACCAAATAGCTATTAACGATTTGAAACT 1059595 Query 71153 CTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATACGGTTCCACTGACTCATTAT 71212 | || || || ||||| | |||||||||||| || || || | | ||| | Sbjct 1059596 CACCGGATAAGACTCTTCTTGTGTAAATATTAGATGTGATTGGCTCAAAACATTCAGTGA 1059655 Query 71213 TTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAGACTA-TTTCTA 71271 ||| | || || | ||| || ||||| ||||| || ||||| | || | ||||| Sbjct 1059656 ATCCTAGTATCTGTGAAGTCGAGGCAGTAGGCATTAAGGCAACCAACA-ACGAGTTTCTG 1059714 Query 71272 AGACCATGTGATCGGATTTTATCTTTTAGAGATTCCCAATTCCA 71315 | ||| | ||| ||||| |||| | || ||||||| ||| Sbjct 1059715 ACACCGTTCGATTTTATTTTCGCTTTCAATGAATCCCAATCCCA 1059758 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671138931544320