Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ogataea_20methanolica_20[genbank_20GCA_5F001600755.1_202016-03-01] 32 sequences; 15,086,366 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq5 134 1e-26 >seq5 Length=1013952 Score = 134 bits (148), Expect = 1e-26 Identities = 297/438 (68%), Gaps = 17/438 (4%) Strand=Plus/Plus Query 50317 GACTTAATACTCAACGCTTTCGATAATATTTCGTGTGTGCGTAAAAAGGACGATTGGGCA 50376 ||||| || |||| ||| | || | |||| | || | |||||| || ||||| Sbjct 647466 GACTTCTTATTCAATGCTATTGAGACTATTCCTTGCATCAAGGAAAAGGCTGACTGGGCC 647525 Query 50377 TTGAAATGGACTaaaaacaaaaaa--CTTACTTTGGCCGAACGTTTAGTGGCGTTTGCCA 50434 ||| ||||| || ||| |||| |||| || |||||| | ||||| || ||||| Sbjct 647526 ATGAGATGGATGAACAACGAAAATGGCTTA--TTCGCCGAAAGATTAGTTGCCTTTGCTG 647583 Query 50435 TAGTTGAAGGTGTGtttttttCCGGTAGCTTTGCAGCCATATTTTACATTAAAACCTTAG 50494 || |||||| | || || || ||| ||||| | || |||| | |||| || Sbjct 647584 CTGTCGAAGGTATCTTCTTCTCTGGTTCATTTGCTTCTATCTTTTGGTTGAAAAAGAGAG 647643 Query 50495 GCATAATGCCCGGCCTCACGTTTAGCAACGAGTTGATTTCGCGCGACGAAGGAATGCACA 50554 || ||||||| ||| | || || || || ||||||| | || ||||| | |||| Sbjct 647644 GCCTAATGCCGGGCTTAACTTTCTCTAATGAATTGATTTGTAGAGATGAAGGTTTACACA 647703 Query 50555 CAGACTTTGCGTGTTTGTACTACAATACGCGCGTAAATGAAAAATTATC-ATACGAAACA 50613 | || ||||| ||||| | || | | | | ||||| || || | | ||| | Sbjct 647704 CTGATTTTGCTTGTTTATT-----ATTCTCTC--ACATGAACAACACTCCAAATGAAGAA 647756 Query 50614 ATTTTGGACATGTTCAAA---GAAGCCGTCGACATCGAAAAAGAGTTT-TTCACGGACGC 50669 ||| | | || | | | ||||| || ||||| ||||| ||| | |||||||| || Sbjct 647757 ATTGTTGTCAAGATTATTACTGAAGCAGTTGACATTGAAAA-GAGATACTTCACGGATGC 647815 Query 50670 TTTACCCGTGGCATTGTTGGGCATGAACGCAGACATGATGTGCGAGTACATTGAGTTTGT 50729 ||||| ||||| ||||| ||||||||||| |||||||| | ||| |||||||||| Sbjct 647816 CTTACCATGTGCATTATTGGGTATGAACGCAGAATTGATGTGCCAATACGTTGAGTTTGT 647875 Query 50730 TGCAGACAGATTGTTGTT 50747 ||| || ||||| || || Sbjct 647876 TGCTGATAGATTATTATT 647893 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 507014197194240