Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ogataea_20methanolica_20[genbank_20GCA_5F001600755.1_202016-03-01]
32 sequences; 15,086,366 total letters
Query= NC_004690.1
Length=113220
Score E
Sequences producing significant alignments: (Bits) Value
seq1 131 1e-25
seq9 114 9e-21
seq2 104 2e-17
>seq1
Length=3681944
Score = 131 bits (144), Expect = 1e-25
Identities = 165/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196
|||||||| |||||||| ||||| || | |||||| || ||||| |||||||| || |
Sbjct 1219112 CCACCTCTTAATCTTAAGACTAAGTGCAAGGTGGATTCCTTTTGAATGTTGTAGTCAGAT 1219171
Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256
| |||| | ||||| ||||| || ||||| | || || | |||||| || ||||
Sbjct 1219172 AAGGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATTAATCTTTGTTGATCAGGTGGA 1219231
Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316
|| ||||| ||||| || ||| ||| ||| | || ||||| || ||| ||
Sbjct 1219232 ATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCTGAGGATTCGACC 1219291
Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363
||||| || ||||| ||||| || | ||||| || |||||||||||
Sbjct 1219292 TCTAAAGTGATGGTCTTACCAGTTAAGGTTTTAACGAAAATTTGCAT 1219338
>seq9
Length=470967
Score = 114 bits (126), Expect = 9e-21
Identities = 126/168 (75%), Gaps = 0/168 (0%)
Strand=Plus/Plus
Query 15201 TTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTC 15260
|||| |||||||||||||||| ||||| | || || | |||||| || |||||| |
Sbjct 292347 TTCTACCGTCTTCTAATTGTTTACCAGCAAAGATTAATCTTTGTTGATCAGGTGGAATAC 292406
Query 15261 CTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTA 15320
|||| || || ||||| ||| ||| | || || |||||| | ||| || ||||
Sbjct 292407 CTTCCTTATCTTGGATTTTCGACTTCACATTATCAATAGTATCGGAAGATTCAACCTCTA 292466
Query 15321 AGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATTTG 15368
|||| ||||| ||||| || | |||||| || ||||||||||| ||||
Sbjct 292467 AGGTGATGGTCTTACCAGTTAAAGTTTTAACGAAAATTTGCATGTTTG 292514
Score = 82.4 bits (90), Expect = 6e-11
Identities = 74/93 (80%), Gaps = 0/93 (0%)
Strand=Plus/Plus
Query 15136 GCCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCT 15195
|||||| | |||||| ||||| || || | |||||| |||||||| || ||||||||
Sbjct 291659 GCCACCACGCAATCTCAAAACCAAGTGTAAGGTGGACTCTTTTTGGATATTGTAATCTGA 291718
Query 15196 TAGAATTCTCGCGTCTTCTAATTGTTTGCCAGC 15228
|| |||| |||||||||||||||| |||||
Sbjct 291719 TAATGTTCTACCGTCTTCTAATTGTTTACCAGC 291751
>seq2
Length=3419278
Score = 104 bits (114), Expect = 2e-17
Identities = 161/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196
|||||||| ||||| || || || || | || || || ||||| |||||||| ||| |
Sbjct 1617092 CCACCTCTTAATCTCAAGACCAAGTGTAAAGTTGATTCCTTTTGGATGTTGTAGTCGGAT 1617151
Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256
| | |||| | ||||||||||| || ||||| | || || | ||||| || |||
Sbjct 1617152 AAAGTTCTACCATCTTCTAATTGCTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGG 1617211
Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316
|| ||||| || || || || ||| || | || || || ||| ||| ||
Sbjct 1617212 ATACCTTCCTTATCTTGGATCTTTGACTTAACGTTGTCAATAGTGTCGGATGATTCGACC 1617271
Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATT 15366
||||| || ||||| ||||| || | ||||| || ||||||||||| ||
Sbjct 1617272 TCTAAAGTGATGGTCTTACCAGTTAAGGTTTTAACGAAAATTTGCATCTT 1617321
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 362179058750112
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |