Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ogataea_20methanolica_20[genbank_20GCA_5F001600755.1_202016-03-01] 32 sequences; 15,086,366 total letters Query= NC_005179.1 Length=134721 Score E Sequences producing significant alignments: (Bits) Value seq5 262 3e-65 >seq5 Length=1013952 Score = 262 bits (290), Expect = 3e-65 Identities = 601/893 (67%), Gaps = 25/893 (3%) Strand=Plus/Minus Query 12860 TTTTGATATTCGCTAACTCTTTTTTCAAAAAAGTTTGTTTTTCCTTCTAACGAAATATTT 12919 ||||| || ||| ||||| |||||||| ||||| || || || |||| ||||||||| Sbjct 648007 TTTTGGTAGTCGGACACTCTCTTTTCAAAGAAGTTGGTCTTACCAGCTAAAGAAATATTT 647948 Query 12920 TCCATAAAATCGAAAGGATTTTTCGAACAAT--AGTATTTTTTACACCCTAATTCTAGTA 12977 |||||||| ||||| || || || ||| | ||| || || || ||||| || || Sbjct 647947 TCCATAAAGTCGAATGGGTTGTT--AACCTTGTAGTGCTTCTTGCAACCTAAAGATAATA 647890 Query 12978 ACAATCTGTCAGCAACAAACTCTATGTACTGTTTCATTAAATCACAGTTCATTCCTATTA 13037 | ||||| |||||||||||||| | ||| || ||| || || |||||| || | || Sbjct 647889 ATAATCTATCAGCAACAAACTCAACGTATTGGCACATCAATTCTGCGTTCATACCCAATA 647830 Query 13038 ATTTTACA-GGCATAGCTTCTGTTAAAAAGtttttttCTATATCAACTGCTTCGATAACT 13096 || ||| || | || || || || | | ||||| || ||||||||||| ||| Sbjct 647829 ATGC-ACATGGTAAGGCATCCGTGAAGTATCTCTTTTCAATGTCAACTGCTTCAGTAATA 647771 Query 13097 ATGTCTCTTATTACGTTCTCTAATGGAGGATTTGAT-AGATGCTTAAACATCATACATGC 13155 || | | | | |||| | | | | ||| | | || || | | ||| || Sbjct 647770 ATCT-TGACAACAATTTCTTCATTTGGAGTGTTGTTCATGTGAGAGAATAATAAACAAGC 647712 Query 13156 AAAATCACAGTGCAATCCTTCATCTCTACTTATTAGCTCGTTTGAAAATGTTAGACCCGG 13215 ||||||| ||| || ||||||||||||| || | || || || || |||| ||||| Sbjct 647711 AAAATCAGTGTGTAAACCTTCATCTCTACAAATCAATTCATTAGAGAAAGTTAAGCCCGG 647652 Query 13216 CATAAGCCCTCGTTTTTTAATCCAAAATATAGCAGCAAACGAACCCGaaaaaaaTATTCC 13275 ||| || |||| ||||| | |||||| |||| |||||| ||||| || || || || || Sbjct 647651 CATTAGGCCTCTCTTTTTCAACCAAAAGATAGAAGCAAATGAACCAGAGAAGAAGATACC 647592 Query 13276 TTCAACTGCTGCAAACGCTATCAACCTTTCACC--ATACGTACTATTTTTACTCTCTATC 13333 ||| || || ||||| || | || ||||| | ||| | | ||||| | | ||| Sbjct 647591 TTCGACAGCAGCAAAGGCAACTAATCTTTCGGCGAATAAG--CCATTTTCGTTGTTCATC 647534 Query 13334 CACTTTCTGGCCCAGTTTGCTTTTTGTTTAACGCAGTTCATATTTTCTATTGCGTTAAAT 13393 || | ||||||||| || |||| || | ||| ||| | || || || || ||| Sbjct 647533 CATCTCATGGCCCAGTCAGCCTTTTCCTTGATGCAAGGAATAGTCTCAATAGCATTGAAT 647474 Query 13394 AAATAAtttttttCCTTACTGTCTAAAATATAAGTATCTATCAATAAGCTATACATTTCT 13453 || | | ||||| || || ||| || || |||||||| || |||| Sbjct 647473 AAGAAGTCAGCCTCCTTTGGATCCTTAACATAGGTGTCGATCAATAATGAGTAAGTTTCA 647414 Query 13454 GAATGAATATTTTCCATCGCTATTTGGAAACCATAAAAACATCTAGCCTCTGATACCTGA 13513 || || || ||||||||| || |||||||| || ||||| | || |||| | || Sbjct 647413 GAGTGGATGTTTTCCATCATGATCTGGAAACCGTAGAAACACTTGGCTTCTGGAATTTGG 647354 Query 13514 ACTTCGGAGTAAAATCTTTCTGCTAAGTTTTCGTTAACTATCCCGTCACTAGCAGCaaaa 13573 ||||||| |||| |||| | ||||| |||||||| || ||||| || ||||| Sbjct 647353 ACTTCGGCAGAAAAGTTTTCAACCAAGTTCTCGTTAACAATACCGTCGGAGGCTGCAAAG 647294 Query 13574 aaaGC---AAGTATGTGCTTAATAAAttttt---tttCGTTT--TCTGACAACTTTAACC 13625 ||||| || | | | | |||| ||| |||| ||| |||| || || Sbjct 647293 AAAGCTAAAACTCTTGAAATGAAAAATCTTTCGCTTTCATTTAATCTG-----TTGTTCC 647239 Query 13626 AATCTGGAAAATCTTTTGATAAATCTACCTCCTCAACGGTCCAAAAAGAAGCAACAGCCT 13685 | || || ||| ||||||||||| | || || | ||||| |||||||| |||||| Sbjct 647238 AGTCATGAGTATCCTTTGATAAATCAATTTCTTCTGCAGTCCAGAAAGAAGCTTCAGCCT 647179 Query 13686 TCTTATACATCATCCATATATCCTTATAAACAATGGGAAACACAACGTATCTT 13738 |||| ||||| ||| || || | || ||| || |||| ||| ||||| Sbjct 647178 TCTTGTACATTTGCCAGATTTCATGGTATTTAATTGGGAACAAAACAAATCTT 647126 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430982231916864