Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ogataea_20methanolica_20[genbank_20GCA_5F001600755.1_202016-03-01]
32 sequences; 15,086,366 total letters
Query= NC_005179.1
Length=134721
Score E
Sequences producing significant alignments: (Bits) Value
seq5 262 3e-65
>seq5
Length=1013952
Score = 262 bits (290), Expect = 3e-65
Identities = 601/893 (67%), Gaps = 25/893 (3%)
Strand=Plus/Minus
Query 12860 TTTTGATATTCGCTAACTCTTTTTTCAAAAAAGTTTGTTTTTCCTTCTAACGAAATATTT 12919
||||| || ||| ||||| |||||||| ||||| || || || |||| |||||||||
Sbjct 648007 TTTTGGTAGTCGGACACTCTCTTTTCAAAGAAGTTGGTCTTACCAGCTAAAGAAATATTT 647948
Query 12920 TCCATAAAATCGAAAGGATTTTTCGAACAAT--AGTATTTTTTACACCCTAATTCTAGTA 12977
|||||||| ||||| || || || ||| | ||| || || || ||||| || ||
Sbjct 647947 TCCATAAAGTCGAATGGGTTGTT--AACCTTGTAGTGCTTCTTGCAACCTAAAGATAATA 647890
Query 12978 ACAATCTGTCAGCAACAAACTCTATGTACTGTTTCATTAAATCACAGTTCATTCCTATTA 13037
| ||||| |||||||||||||| | ||| || ||| || || |||||| || | ||
Sbjct 647889 ATAATCTATCAGCAACAAACTCAACGTATTGGCACATCAATTCTGCGTTCATACCCAATA 647830
Query 13038 ATTTTACA-GGCATAGCTTCTGTTAAAAAGtttttttCTATATCAACTGCTTCGATAACT 13096
|| ||| || | || || || || | | ||||| || ||||||||||| |||
Sbjct 647829 ATGC-ACATGGTAAGGCATCCGTGAAGTATCTCTTTTCAATGTCAACTGCTTCAGTAATA 647771
Query 13097 ATGTCTCTTATTACGTTCTCTAATGGAGGATTTGAT-AGATGCTTAAACATCATACATGC 13155
|| | | | | |||| | | | | ||| | | || || | | ||| ||
Sbjct 647770 ATCT-TGACAACAATTTCTTCATTTGGAGTGTTGTTCATGTGAGAGAATAATAAACAAGC 647712
Query 13156 AAAATCACAGTGCAATCCTTCATCTCTACTTATTAGCTCGTTTGAAAATGTTAGACCCGG 13215
||||||| ||| || ||||||||||||| || | || || || || |||| |||||
Sbjct 647711 AAAATCAGTGTGTAAACCTTCATCTCTACAAATCAATTCATTAGAGAAAGTTAAGCCCGG 647652
Query 13216 CATAAGCCCTCGTTTTTTAATCCAAAATATAGCAGCAAACGAACCCGaaaaaaaTATTCC 13275
||| || |||| ||||| | |||||| |||| |||||| ||||| || || || || ||
Sbjct 647651 CATTAGGCCTCTCTTTTTCAACCAAAAGATAGAAGCAAATGAACCAGAGAAGAAGATACC 647592
Query 13276 TTCAACTGCTGCAAACGCTATCAACCTTTCACC--ATACGTACTATTTTTACTCTCTATC 13333
||| || || ||||| || | || ||||| | ||| | | ||||| | | |||
Sbjct 647591 TTCGACAGCAGCAAAGGCAACTAATCTTTCGGCGAATAAG--CCATTTTCGTTGTTCATC 647534
Query 13334 CACTTTCTGGCCCAGTTTGCTTTTTGTTTAACGCAGTTCATATTTTCTATTGCGTTAAAT 13393
|| | ||||||||| || |||| || | ||| ||| | || || || || |||
Sbjct 647533 CATCTCATGGCCCAGTCAGCCTTTTCCTTGATGCAAGGAATAGTCTCAATAGCATTGAAT 647474
Query 13394 AAATAAtttttttCCTTACTGTCTAAAATATAAGTATCTATCAATAAGCTATACATTTCT 13453
|| | | ||||| || || ||| || || |||||||| || ||||
Sbjct 647473 AAGAAGTCAGCCTCCTTTGGATCCTTAACATAGGTGTCGATCAATAATGAGTAAGTTTCA 647414
Query 13454 GAATGAATATTTTCCATCGCTATTTGGAAACCATAAAAACATCTAGCCTCTGATACCTGA 13513
|| || || ||||||||| || |||||||| || ||||| | || |||| | ||
Sbjct 647413 GAGTGGATGTTTTCCATCATGATCTGGAAACCGTAGAAACACTTGGCTTCTGGAATTTGG 647354
Query 13514 ACTTCGGAGTAAAATCTTTCTGCTAAGTTTTCGTTAACTATCCCGTCACTAGCAGCaaaa 13573
||||||| |||| |||| | ||||| |||||||| || ||||| || |||||
Sbjct 647353 ACTTCGGCAGAAAAGTTTTCAACCAAGTTCTCGTTAACAATACCGTCGGAGGCTGCAAAG 647294
Query 13574 aaaGC---AAGTATGTGCTTAATAAAttttt---tttCGTTT--TCTGACAACTTTAACC 13625
||||| || | | | | |||| ||| |||| ||| |||| || ||
Sbjct 647293 AAAGCTAAAACTCTTGAAATGAAAAATCTTTCGCTTTCATTTAATCTG-----TTGTTCC 647239
Query 13626 AATCTGGAAAATCTTTTGATAAATCTACCTCCTCAACGGTCCAAAAAGAAGCAACAGCCT 13685
| || || ||| ||||||||||| | || || | ||||| |||||||| ||||||
Sbjct 647238 AGTCATGAGTATCCTTTGATAAATCAATTTCTTCTGCAGTCCAGAAAGAAGCTTCAGCCT 647179
Query 13686 TCTTATACATCATCCATATATCCTTATAAACAATGGGAAACACAACGTATCTT 13738
|||| ||||| ||| || || | || ||| || |||| ||| |||||
Sbjct 647178 TCTTGTACATTTGCCAGATTTCATGGTATTTAATTGGGAACAAAACAAATCTT 647126
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 430982231916864
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |