Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ogataea_20methanolica_20[genbank_20GCA_5F001600755.1_202016-03-01]
32 sequences; 15,086,366 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq5 217 3e-51
seq2 161 2e-34
seq1 152 1e-31
seq9 138 3e-27
>seq5
Length=1013952
Score = 217 bits (240), Expect = 3e-51
Identities = 581/870 (67%), Gaps = 21/870 (2%)
Strand=Plus/Plus
Query 268700 AGATTTGTGATATTTCCAATACAGCATGGTGATATATGGAGGATGTACAAACAGGCCGTT 268759
|||||||| | || ||||| | | ||| || ||| |||||||| |||| |
Sbjct 647127 AGATTTGTTTTGTTCCCAATTAAATACCATGAAATCTGGCAAATGTACAAGAAGGCTGAA 647186
Query 268760 GCTTCTTTTTGGACTGTAGAAGAAGTAGATCTGTCTTATGACT-TAATAGATTGGAAAAA 268818
|||||||| ||||||| ||||||| | ||| | || | || | || || ||||| ||
Sbjct 647187 GCTTCTTTCTGGACTGCAGAAGAAATTGATTTATCAAAGGATACTCAT-GACTGGAACAA 647245
Query 268819 T---TTAAAACCAGAAGAAAGAAGATTTATATCTTATATTCTTGCGTTTTTTGCAGTTAG 268875
||||| | |||||| || || || || | || || |||||||
Sbjct 647246 CAGATTAAATGAAAGCGAAAGATTTTTCATTTCAAGAGTTTTAGCTTTCTTTGCAGCCTC 647305
Query 268876 TGATGGTATCGTTAACGAAAATCTAGTAGAGAAGTTCTGTCAAGAGGTACAGATTCCTGA 268935
|| ||||| |||||||| || | || || || || | | || || || ||||| ||
Sbjct 647306 CGACGGTATTGTTAACGAGAACTTGGTTGAAAACTTTTCTGCCGAAGTCCAAATTCCAGA 647365
Query 268936 AGCCAGATGTTTTTACGGATTCCAGATAGCTATAGAAAATATTCATTCAGAGATGTACAG 268995
||||| ||||| ||||| |||||||| || ||||| || || || || | |||
Sbjct 647366 AGCCAAGTGTTTCTACGGTTTCCAGATCATGATGGAAAACATCCACTCTGAAACTTACTC 647425
Query 268996 TCTATTAATAGATACTTATATAGATGATAACAACGAAAAGAAAAGACTATTTTCTTCTAT 269055
|||| || || || ||| | | ||| || || | |||| | ||||
Sbjct 647426 ATTATTGATCGACACCTATGTTAAGGATCCAAAGGAGGCTGACTTCTTATTCAATGCTAT 647485
Query 269056 -GAGAACTATGGACTGTGTGAGaaaaaaaTCTGAATGGGCTCTGAAATGGATAAACGAT- 269113
|||| |||| || | | |||| |||| ||||| ||| |||||| ||| |
Sbjct 647486 TGAGA-CTATTCCTTGCATCAAGGAAAAGGCTGACTGGGCCATGAGATGGATGAACAACG 647544
Query 269114 AGCGCGCCTTA--CGGAGAAAGGTTAGTTGCTTTTGCCGCTGTAGAAGGTATATTCTTTT 269171
| | |||| || ||||| |||||||| ||||| ||||| |||||||| ||||| |
Sbjct 647545 AAAATGGCTTATTCGCCGAAAGATTAGTTGCCTTTGCTGCTGTCGAAGGTATCTTCTTCT 647604
Query 269172 CGGGGTCTTTTGCCGCTATCTTTTGGTTGAAGAAAAGAGGCCTTATGCCAGGATTAACTT 269231
| || || ||||| |||||||||||||||| || |||||||| ||||| || |||||||
Sbjct 647605 CTGGTTCATTTGCTTCTATCTTTTGGTTGAAAAAGAGAGGCCTAATGCCGGGCTTAACTT 647664
Query 269232 TCTCTAACGAATTGATAAGCAGGGACGAAGGTTTACACTGCGACTTCGCTTGTTTATTAT 269291
||||||| |||||||| | || || |||||||||||| || || |||||||||||||
Sbjct 647665 TCTCTAATGAATTGATTTGTAGAGATGAAGGTTTACACACTGATTTTGCTTGTTTATTAT 647724
Query 269292 TTACTAATTATCTTTCAC-ACAAACCTTCTCAAGATAGAGTATACGAAATTATAGATTCA 269350
| || | | | || ||| || | |||| | || | | ||||| | |
Sbjct 647725 TCTCTCA----CATGAACAACACTCCAAATGAAGAAATTGTTGTCAAGATTATTACTGAA 647780
Query 269351 GCTGTTTCTGTAGAAACAGA-ATTTCTAACGGAAGCTCTATC-TATCGATCTTATCGGTA 269408
|| ||| | |||| ||| || | ||||| || || | | | || | | ||||
Sbjct 647781 GCAGTTGACATTGAAA-AGAGATACTTCACGGATGCCTTACCATGTGCAT-TATTGGGTA 647838
Query 269409 TGAATAGCA-AATCGATGATAGAATATATTAAGTTCGTATCTGATAGATTGCTGGTGTCT 269467
|||| ||| ||| |||| |||| || |||| || |||||||||| | | |||
Sbjct 647839 TGAA-CGCAGAATTGATGTGCCAATACGTTGAGTTTGTTGCTGATAGATTATTATTATCT 647897
Query 269468 TTAGGGTTTAGTAAAAAATATAACGTTGAAAATCCGTTTAGTTTTATGGAGAATATATCA 269527
||||| | | || | || || ||| | || || || |||||||| ||||| ||
Sbjct 647898 TTAGGTTGCAAGAAGCACTACAAGGTTAACAACCCATTCGACTTTATGGAAAATATTTCT 647957
Query 269528 TTAGAAGGTAAGGCTAATTTCTTCGAGAAG 269557
|||| |||||| | || ||||| || |||
Sbjct 647958 TTAGCTGGTAAGACCAACTTCTTTGAAAAG 647987
>seq2
Length=3419278
Score = 161 bits (178), Expect = 2e-34
Identities = 176/234 (75%), Gaps = 0/234 (0%)
Strand=Plus/Plus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
|| || ||||||| || | || | ||||| || ||||| || || || || |||||
Sbjct 1617089 ATACCACCTCTTAATCTCAAGACCAAGTGTAAAGTTGATTCCTTTTGGATGTTGTAGTCG 1617148
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
|||| ||||||||| ||||||| ||| || |||||||| |||| ||||||||||||||
Sbjct 1617149 GATAAAGTTCTACCATCTTCTAATTGCTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 1617208
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509
|| || ||||| ||||| || ||||||| || || || || | || ||| | |||
Sbjct 1617209 GGGATACCTTCCTTATCTTGGATCTTTGACTTAACGTTGTCAATAGTGTCGGATGATTCG 1617268
Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATTTTG 104563
||||||| || || ||||||||||| | ||||| || || || ||||| |||
Sbjct 1617269 ACCTCTAAAGTGATGGTCTTACCAGTTAAGGTTTTAACGAAAATTTGCATCTTG 1617322
Score = 84.2 bits (92), Expect = 5e-11
Identities = 123/172 (72%), Gaps = 4/172 (2%)
Strand=Plus/Plus
Query 165098 GATAAGGATGAATGGAATACTTGGAATAAAATACACGATCCTGTTTTACATATAGAGCTA 165157
||||| || ||||||| |||||||| || | | |||||||||||||| || || |
Sbjct 614257 GATAAAGACGAATGGACCACTTGGAACAATAGAACAGATCCTGTTTTACACATTGAATTG 614316
Query 165158 AGAAGATGGGCAGATATGATGTTGATAGCACCCTTAACAGCAA--ACAGTTTAGCGAAGA 165215
||||| ||||||||| | || | || || || |||| |||| ||| ||| | || |
Sbjct 614317 AGAAGGTGGGCAGATGTTTTGATCATTGCTCCATTAAGTGCAAATACACTTT--CCAAAA 614374
Query 165216 TAGCTAACGGTATCTGTAATAACTTGTTAACGTGTATAGTTAGAGCGTGGAA 165267
| ||| || | ||| |||| |||||||| | |||||||| |||||
Sbjct 614375 TTGCTTTAGGCTTATGTGATAATTTGTTAACAAACGTTGTTAGAGCTTGGAA 614426
>seq1
Length=3681944
Score = 152 bits (168), Expect = 1e-31
Identities = 175/234 (75%), Gaps = 1/234 (0%)
Strand=Plus/Plus
Query 104333 CCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGAT 104392
|| ||||||| || | |||| || || || ||||| || ||||| || |||||||||
Sbjct 1219112 CCACCTCTTAATCTTAAGACTAAGTGCAAGGTGGATTCCTTTTGAATGTTGTAGTCAGAT 1219171
Query 104393 AGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGT 104452
| |||||||| ||||| | ||| || |||||||| |||| || ||||||||||| ||
Sbjct 1219172 AAGGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATTAATCTTTGTTGATCAGGTGGA 1219231
Query 104453 ATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACC 104512
|| ||||| || || || ||||| | || ||||| || | ||| || | ||| |||
Sbjct 1219232 ATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCTGAGGATTCGACC 1219291
Query 104513 TCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATTT-TGTG 104565
|||| || || ||||||||||| | ||||| || || || ||||||| ||||
Sbjct 1219292 TCTAAAGTGATGGTCTTACCAGTTAAGGTTTTAACGAAAATTTGCATTTCTGTG 1219345
>seq9
Length=470967
Score = 138 bits (152), Expect = 3e-27
Identities = 137/176 (78%), Gaps = 1/176 (1%)
Strand=Plus/Plus
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
|||| |||||||||||||||| |||||| |||||||| |||| || |||||||||||
Sbjct 292340 GATAATGTTCTACCGTCTTCTAATTGTTTACCAGCAAAGATTAATCTTTGTTGATCAGGT 292399
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509
|| || ||||| ||||| || || || | || ||||| || | |||||| || |||
Sbjct 292400 GGAATACCTTCCTTATCTTGGATTTTCGACTTCACATTATCAATAGTATCGGAAGATTCA 292459
Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT-TTTGT 104564
||||||| || || ||||||||||| | ||||| || || || ||||| |||||
Sbjct 292460 ACCTCTAAGGTGATGGTCTTACCAGTTAAAGTTTTAACGAAAATTTGCATGTTTGT 292515
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1151397927926656
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |