Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ogataea_20methanolica_20[genbank_20GCA_5F001600755.1_202016-03-01]
32 sequences; 15,086,366 total letters
Query= NC_005902.1
Length=186250
Score E
Sequences producing significant alignments: (Bits) Value
seq1 176 5e-39
seq8 87.8 2e-12
>seq1
Length=3681944
Score = 176 bits (194), Expect = 5e-39
Identities = 395/588 (67%), Gaps = 24/588 (4%)
Strand=Plus/Minus
Query 164398 AATTTTGAAGAAATGGGAGTAGGTGGACTAGATCGAGAATTTTCTCTTATTTTCAGACGA 164457
|| |||||||| |||||| | ||||| ||||| ||||||| || ||||||||| ||
Sbjct 2341291 AAATTTGAAGATATGGGAATTGGTGGGTTAGATAAAGAATTTACTTCCATTTTCAGAAGA 2341232
Query 164458 GCATTTGCTTCTAGATCAGTTCCTATCGAAATAATaaaaaaaTTAGGCTGTAAACATATA 164517
|| ||||| |||||| | |||| | |||| | ||||||||| | | ||| |
Sbjct 2341231 GCCTTTGCATCTAGAATATTTCCACCAGGGTTAATTGAGAAATTAGGCATTCAGCATGTC 2341172
Query 164518 AAAGGAATTTTATTACATGGACCTCCTGGTTGCGGTAAAACATTAATGGCTCGATGCATT 164577
||||| || ||||| | || || || ||| |||||||| || || ||| || |||
Sbjct 2341171 AAAGGTATGCTATTATACGGTCCACCAGGTACTGGTAAAACTTTGATTGCTAGACAAATT 2341112
Query 164578 GCTCAAGCTTTTAAATCGC----GACCCGTTAAAATTGTTAATGGTCCTGAATTATTGAA 164633
| | ||| | || || ||| || || ||||||||| |||||||||||| | |
Sbjct 2341111 GGT-AAGATGTTGAA-CGCAAAGGAACC--TAAAATTGTCAATGGTCCTGAAATTCTATC 2341056
Query 164634 CAAATATGTAGGTGAGTCAGAAGCTAATGTTAGAAAGTTGTTTCAGGAGGCTGAAGAAGA 164693
|||||| || ||| || |||| ||| | ||||| |||||| |||| || || | ||
Sbjct 2341055 CAAATACGTTGGTTCATCGGAAGAAAATATCAGAAATTTGTTTAAGGATGCAGAGGCCGA 2340996
Query 164694 --ACAAAAGAAAGCAGGTTTAGCTAGTAAATTACATGTTATTGTTTTTGATGAGATAGAT 164751
| ||| ||| |||| || | |||||| | ||| | |||||||| |||||
Sbjct 2340995 GTATAAATCAAA--AGGTGAAGGATCTTCGTTACATATCATTATCTTTGATGAATTAGAT 2340938
Query 164752 GCTCTTTGCAAAAAACGTGG---------TGATAATAT---TATTCATGATGCAGTGGTT 164799
|| ||| |||| || | || |||| || | || |||| || |||
Sbjct 2340937 TCTGTTTTCAAACAAAGAGGCTCAAGAGGTGATGGTACCGGTGTTGCTGATAATGTTGTT 2340878
Query 164800 AATCAGTTGCTTTCTAAAATAGATGGTGTAGAATCCTTAAATAATATTTTAATTGTAGGT 164859
|||||||| | | ||||| |||||||| || || ||||| |||||| || | |||
Sbjct 2340877 AATCAGTTATTAGCCAAAATGGATGGTGTTGATCAATTGAATAACATTTTAGTTATTGGT 2340818
Query 164860 ATGACCAACCGACCTGATTTAATTGATGATGCTTTATTACGACCTGGTCGATTAGAATTG 164919
||||| || || ||||| || ||| ||| || | |||| || |||| ||| |
Sbjct 2340817 ATGACTAATAGAAGAGATTTGATAGATAGTGCATTGCTGAGACCGGGAAGATTTGAAGTT 2340758
Query 164920 AAAATAGAAATAGGATTACCCGACAAAGAAGGACGCCTTCAAATTTTA 164967
|| | || || ||||| || |||| || | ||||||||||
Sbjct 2340757 CAAGTTGAGATTCATTTACCTGATGAAGATGGTAGAACTCAAATTTTA 2340710
Score = 96.9 bits (106), Expect = 4e-15
Identities = 361/565 (64%), Gaps = 41/565 (7%)
Strand=Plus/Plus
Query 6706 GGATTATAATCTAACAATTCAAAATCTTCAAATTTAAAATCACATAAATTATCAGACttt 6765
||||| ||||| | | |||||||||||| ||||| |||||| | ||| || |||
Sbjct 403947 GGATTGTAATCCACAACTTCAAAATCTTCGAATTTGAAATCATCAATATTTGCAACCTTA 404006
Query 6766 ttttttAATATTACAACAGGTGAAGGTTTTATTGATCGAGTT--AATTGTTCTTTTATAG 6823
| || | || ||| | ||| | || || | || | ||| ||||| | |
Sbjct 404007 CGTCCTA-TCTTCAAACTTGGGAAATCTCTAG-GAACTCTTTGCATTTGCTCTTTCAGGG 404064
Query 6824 CTTTTATATGATCTAAATAAATATGAGCATCTCCTAGCGTATGAATAAATTCACCTGGTT 6883
| | | |||||| |||||| |||| ||| || | |||||||| || || | ||||
Sbjct 404065 CATCGACATGATCGCAATAAACGTGAGAATCACCCATAGTATGAATGAACTCTGCAGGTT 404124
Query 6884 TCATATCAACAGCTTGAGCAATTAAATATGTTAATAATGCATAAGAAGCTACATTAAAAG 6943
||||||||| | || ||||| | || | || ||| || || || | || ||||
Sbjct 404125 CCATATCAACGACATGGGCAATCATGATGGTGAGTAGTGCGTATGAGGCGATGTTGAAAG 404184
Query 6944 GTACACCTAATCCCATATCTGCTGATCTTTGATAACATTGA--CAAGATAA--------- 6992
| || |||||||||||||| ||||||||||| ||| || || ||||
Sbjct 404185 GAACGCCTAATCCCATATCACACGATCTTTGATA-CAT-GATGCACGATAGTTTTGGTTT 404242
Query 6993 AATA---------------TTGTCTATAG---------CATAAAATTGACACAATACATG 7028
| || || ||| | | | ||||||||||| || || ||
Sbjct 404243 ATTAGCTGTGCCATCTTCGTTATCTTTCGGGAAGTTGACGTAAAATTGACAGAAAACGTG 404302
Query 7029 ACATGGAGGTAAAACAGCCTGATCTATATCAGATGGATTCCAAGCAGTCATTAAAATACG 7088
||| |||||||| | || | | | | | |||||||| ||| |||| | || |
Sbjct 404303 ACAGGGAGGTAATGCCATTTGTTTGAAAGCCGGCGGATTCCAGGCACTCATGATGATTCT 404362
Query 7089 TCTATCATTTGGATTTGTTTTTAATTTTGTTATAATTATTTGTAATTGATCTATACCCTG 7148
||| || | ||| ||||| ||||| ||||| | | | |||||| | ||| |
Sbjct 404363 TCTGTCGTATGGGTTTGTCTTTAAGGAGGTTATCACTTGAGCGAGTTGATCGAAACCTTT 404422
Query 7149 ACCTTCATAATTAGTATGACAATTTATATAATTAGCTCCAAAATGTCTCCATTGAAACCC 7208
|||| ||||| |||| || | | || | || ||||||||||||||||| || ||
Sbjct 404423 ACCTGTATAATCTGTATCGCAGTCAACGTAGTCTGCACCAAAATGTCTCCATTGGAAACC 404482
Query 7209 ATAAATAGGACCTAAATCACCTTCT 7233
||| | || || | |||||||||
Sbjct 404483 ATACACTGGGCCAAGGTCACCTTCT 404507
>seq8
Length=614380
Score = 87.8 bits (96), Expect = 2e-12
Identities = 125/176 (71%), Gaps = 0/176 (0%)
Strand=Plus/Plus
Query 19328 GTTAAAATTAAATTAAGATCTTCTAAAATACCTGAAATAGGTGATAAGTTTGCTTCTTTT 19387
|||||| ||| | | ||| || | || | || |||| |||||||| || ||||||
Sbjct 241570 GTTAAAGTTAGAATGAGAACTACAAAGACTCCGCAAATTGGTGATAAATTCGCTTCTAGA 241629
Query 19388 ACTGCTCAAAAAGGCACATGTGGTATGATTTATCGTCAAGAAGATATGCCTTTTACTAAA 19447
|| |||||| || || |||||| | ||| | || || |||||||| ||||||
Sbjct 241630 CATGGTCAAAAGGGTACTATTGGTATAACATATAGACACGAGGATATGCCGTTTACTGCT 241689
Query 19448 GATGGTATAGTGCCGGATCTTATTATTAACCCACATGCTTTTCCAAGTCGAATGAC 19503
| ||||| || || ||| | || || |||||||||||| ||||| || |||||
Sbjct 241690 CAAGGTATTGTTCCAGATTTAATCATCAACCCACATGCTATTCCATCCCGTATGAC 241745
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 595871761651200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |